Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14660

Experiment: RCH2_defined_1percent_glucose with Chloride 400 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14655 and BWI76_RS14660 overlap by 4 nucleotides BWI76_RS14655: BWI76_RS14655 - FKBP-type peptidyl-prolyl isomerase domain-containing protein, at 3,077,746 to 3,079,032 _RS14655 BWI76_RS14660: BWI76_RS14660 - hypothetical protein, at 3,079,029 to 3,079,421 _RS14660 Position (kb) 3079 3080Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3078.041 kb on + strandat 3078.046 kb on + strand, within BWI76_RS14655at 3078.046 kb on + strand, within BWI76_RS14655at 3078.046 kb on + strand, within BWI76_RS14655at 3078.046 kb on + strand, within BWI76_RS14655at 3078.049 kb on - strand, within BWI76_RS14655at 3078.054 kb on - strand, within BWI76_RS14655at 3078.054 kb on - strand, within BWI76_RS14655at 3078.160 kb on + strand, within BWI76_RS14655at 3078.168 kb on - strand, within BWI76_RS14655at 3078.170 kb on + strand, within BWI76_RS14655at 3078.183 kb on - strand, within BWI76_RS14655at 3078.184 kb on - strand, within BWI76_RS14655at 3078.186 kb on + strand, within BWI76_RS14655at 3078.193 kb on + strand, within BWI76_RS14655at 3078.195 kb on + strand, within BWI76_RS14655at 3078.195 kb on + strand, within BWI76_RS14655at 3078.195 kb on + strand, within BWI76_RS14655at 3078.197 kb on + strand, within BWI76_RS14655at 3078.203 kb on - strand, within BWI76_RS14655at 3078.213 kb on - strand, within BWI76_RS14655at 3078.226 kb on - strand, within BWI76_RS14655at 3078.262 kb on + strand, within BWI76_RS14655at 3078.270 kb on - strand, within BWI76_RS14655at 3078.305 kb on - strand, within BWI76_RS14655at 3078.305 kb on - strand, within BWI76_RS14655at 3078.305 kb on - strand, within BWI76_RS14655at 3078.305 kb on - strand, within BWI76_RS14655at 3078.305 kb on - strandat 3078.305 kb on - strandat 3078.356 kb on + strand, within BWI76_RS14655at 3078.364 kb on - strand, within BWI76_RS14655at 3078.364 kb on - strand, within BWI76_RS14655at 3078.376 kb on - strandat 3078.829 kb on - strandat 3078.881 kb on + strand, within BWI76_RS14655at 3078.889 kb on - strand, within BWI76_RS14655at 3078.889 kb on - strand, within BWI76_RS14655at 3078.943 kb on - strandat 3078.952 kb on + strandat 3078.960 kb on - strandat 3078.960 kb on - strandat 3079.044 kb on - strandat 3079.046 kb on + strandat 3079.046 kb on + strandat 3079.088 kb on + strand, within BWI76_RS14660at 3079.511 kb on - strandat 3079.598 kb on + strandat 3079.601 kb on - strandat 3079.601 kb on - strandat 3079.603 kb on + strandat 3079.603 kb on + strandat 3079.603 kb on + strandat 3079.603 kb on + strandat 3079.606 kb on - strandat 3079.606 kb on - strandat 3079.606 kb on - strandat 3079.606 kb on - strandat 3079.611 kb on - strandat 3079.611 kb on - strandat 3079.611 kb on - strandat 3079.611 kb on - strandat 3079.611 kb on - strandat 3079.611 kb on - strandat 3079.611 kb on - strandat 3079.619 kb on + strandat 3079.619 kb on + strandat 3079.620 kb on + strandat 3079.620 kb on + strandat 3079.625 kb on + strandat 3079.625 kb on + strandat 3079.626 kb on - strandat 3079.627 kb on - strandat 3079.627 kb on - strandat 3079.627 kb on - strandat 3079.633 kb on - strandat 3079.633 kb on - strandat 3079.633 kb on - strandat 3079.633 kb on - strandat 3079.645 kb on - strandat 3079.689 kb on + strandat 3079.692 kb on + strandat 3079.692 kb on + strandat 3079.696 kb on + strandat 3079.696 kb on + strandat 3079.704 kb on - strandat 3079.704 kb on - strandat 3079.704 kb on - strandat 3079.704 kb on - strandat 3079.704 kb on - strandat 3079.727 kb on + strandat 3079.727 kb on + strandat 3079.727 kb on + strandat 3079.727 kb on + strandat 3079.730 kb on - strandat 3079.735 kb on - strandat 3079.749 kb on + strandat 3079.757 kb on + strandat 3079.761 kb on + strandat 3079.766 kb on + strandat 3079.766 kb on + strandat 3079.766 kb on + strandat 3079.766 kb on + strandat 3079.766 kb on + strandat 3079.766 kb on + strandat 3079.766 kb on + strandat 3079.766 kb on + strandat 3079.773 kb on + strandat 3079.773 kb on + strandat 3079.774 kb on - strandat 3079.774 kb on - strandat 3079.774 kb on - strandat 3079.774 kb on - strandat 3079.774 kb on - strandat 3079.784 kb on + strandat 3079.784 kb on + strandat 3079.792 kb on - strandat 3079.792 kb on - strandat 3079.792 kb on - strandat 3079.800 kb on + strandat 3079.803 kb on - strandat 3079.803 kb on - strandat 3079.805 kb on + strandat 3079.834 kb on + strandat 3079.837 kb on - strandat 3079.838 kb on - strandat 3079.889 kb on + strandat 3079.889 kb on + strandat 3079.897 kb on - strandat 3080.046 kb on - strandat 3080.046 kb on - strandat 3080.063 kb on - strandat 3080.110 kb on + strandat 3080.115 kb on + strandat 3080.123 kb on - strandat 3080.166 kb on - strandat 3080.290 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_1percent_glucose with Chloride 400 mM
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3,078,041 + +1.3
3,078,046 + BWI76_RS14655 0.23 +0.9
3,078,046 + BWI76_RS14655 0.23 -0.7
3,078,046 + BWI76_RS14655 0.23 +0.8
3,078,046 + BWI76_RS14655 0.23 +0.3
3,078,049 - BWI76_RS14655 0.24 -2.0
3,078,054 - BWI76_RS14655 0.24 -0.4
3,078,054 - BWI76_RS14655 0.24 -1.0
3,078,160 + BWI76_RS14655 0.32 -0.1
3,078,168 - BWI76_RS14655 0.33 +1.1
3,078,170 + BWI76_RS14655 0.33 -0.5
3,078,183 - BWI76_RS14655 0.34 +0.1
3,078,184 - BWI76_RS14655 0.34 +0.3
3,078,186 + BWI76_RS14655 0.34 +0.1
3,078,193 + BWI76_RS14655 0.35 -1.5
3,078,195 + BWI76_RS14655 0.35 -1.3
3,078,195 + BWI76_RS14655 0.35 -0.4
3,078,195 + BWI76_RS14655 0.35 +1.0
3,078,197 + BWI76_RS14655 0.35 +2.9
3,078,203 - BWI76_RS14655 0.36 -0.7
3,078,213 - BWI76_RS14655 0.36 +0.3
3,078,226 - BWI76_RS14655 0.37 +0.3
3,078,262 + BWI76_RS14655 0.40 -1.3
3,078,270 - BWI76_RS14655 0.41 +0.3
3,078,305 - BWI76_RS14655 0.43 -2.8
3,078,305 - BWI76_RS14655 0.43 +1.3
3,078,305 - BWI76_RS14655 0.43 -0.0
3,078,305 - BWI76_RS14655 0.43 -1.5
3,078,305 - +1.3
3,078,305 - -1.0
3,078,356 + BWI76_RS14655 0.47 +3.0
3,078,364 - BWI76_RS14655 0.48 -1.6
3,078,364 - BWI76_RS14655 0.48 -0.7
3,078,376 - +1.3
3,078,829 - -0.3
3,078,881 + BWI76_RS14655 0.88 -2.7
3,078,889 - BWI76_RS14655 0.89 +1.3
3,078,889 - BWI76_RS14655 0.89 -1.2
3,078,943 - -0.6
3,078,952 + -0.9
3,078,960 - -0.3
3,078,960 - -2.3
3,079,044 - +2.9
3,079,046 + -0.4
3,079,046 + +1.3
3,079,088 + BWI76_RS14660 0.15 +1.3
3,079,511 - +1.9
3,079,598 + -0.6
3,079,601 - -0.1
3,079,601 - -0.2
3,079,603 + +0.2
3,079,603 + -3.1
3,079,603 + -2.1
3,079,603 + +1.3
3,079,606 - -0.0
3,079,606 - +0.5
3,079,606 - -0.2
3,079,606 - +0.8
3,079,611 - -0.5
3,079,611 - -0.8
3,079,611 - -0.1
3,079,611 - -0.6
3,079,611 - -0.1
3,079,611 - -0.2
3,079,611 - +0.8
3,079,619 + +1.3
3,079,619 + -1.9
3,079,620 + +0.4
3,079,620 + +1.3
3,079,625 + +0.7
3,079,625 + -1.7
3,079,626 - +0.4
3,079,627 - +0.3
3,079,627 - -2.6
3,079,627 - -0.3
3,079,633 - -0.6
3,079,633 - -0.4
3,079,633 - -0.0
3,079,633 - -0.2
3,079,645 - +0.5
3,079,689 + +1.1
3,079,692 + +0.6
3,079,692 + +1.9
3,079,696 + +1.8
3,079,696 + -2.2
3,079,704 - -2.8
3,079,704 - -0.3
3,079,704 - -0.8
3,079,704 - -0.7
3,079,704 - +0.3
3,079,727 + +0.2
3,079,727 + +1.5
3,079,727 + -0.0
3,079,727 + -0.9
3,079,730 - -0.4
3,079,735 - -0.6
3,079,749 + +1.3
3,079,757 + +0.7
3,079,761 + +1.9
3,079,766 + +1.3
3,079,766 + -0.7
3,079,766 + -1.1
3,079,766 + -2.4
3,079,766 + +0.1
3,079,766 + +0.9
3,079,766 + -0.0
3,079,766 + -0.7
3,079,773 + -1.6
3,079,773 + -0.3
3,079,774 - -1.5
3,079,774 - +0.6
3,079,774 - +0.1
3,079,774 - +1.3
3,079,774 - +1.3
3,079,784 + +0.7
3,079,784 + -0.8
3,079,792 - -0.3
3,079,792 - -0.3
3,079,792 - +0.3
3,079,800 + +0.0
3,079,803 - +0.5
3,079,803 - -0.3
3,079,805 + -0.0
3,079,834 + +0.3
3,079,837 - -0.2
3,079,838 - +1.3
3,079,889 + +0.8
3,079,889 + -0.2
3,079,897 - +0.2
3,080,046 - +0.6
3,080,046 - +0.4
3,080,063 - -0.5
3,080,110 + +0.6
3,080,115 + -0.7
3,080,123 - +0.3
3,080,166 - +2.0
3,080,290 - -0.9

Or see this region's nucleotide sequence