Experiment: RCH2_defined_1percent_glucose with Chloride 400 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14655 and BWI76_RS14660 overlap by 4 nucleotides
BWI76_RS14655: BWI76_RS14655 - FKBP-type peptidyl-prolyl isomerase domain-containing protein, at 3,077,746 to 3,079,032
_RS14655
BWI76_RS14660: BWI76_RS14660 - hypothetical protein, at 3,079,029 to 3,079,421
_RS14660
Position (kb)
3079
3080 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3078.041 kb on + strand at 3078.046 kb on + strand, within BWI76_RS14655 at 3078.046 kb on + strand, within BWI76_RS14655 at 3078.046 kb on + strand, within BWI76_RS14655 at 3078.046 kb on + strand, within BWI76_RS14655 at 3078.049 kb on - strand, within BWI76_RS14655 at 3078.054 kb on - strand, within BWI76_RS14655 at 3078.054 kb on - strand, within BWI76_RS14655 at 3078.160 kb on + strand, within BWI76_RS14655 at 3078.168 kb on - strand, within BWI76_RS14655 at 3078.170 kb on + strand, within BWI76_RS14655 at 3078.183 kb on - strand, within BWI76_RS14655 at 3078.184 kb on - strand, within BWI76_RS14655 at 3078.186 kb on + strand, within BWI76_RS14655 at 3078.193 kb on + strand, within BWI76_RS14655 at 3078.195 kb on + strand, within BWI76_RS14655 at 3078.195 kb on + strand, within BWI76_RS14655 at 3078.195 kb on + strand, within BWI76_RS14655 at 3078.197 kb on + strand, within BWI76_RS14655 at 3078.203 kb on - strand, within BWI76_RS14655 at 3078.213 kb on - strand, within BWI76_RS14655 at 3078.226 kb on - strand, within BWI76_RS14655 at 3078.262 kb on + strand, within BWI76_RS14655 at 3078.270 kb on - strand, within BWI76_RS14655 at 3078.305 kb on - strand, within BWI76_RS14655 at 3078.305 kb on - strand, within BWI76_RS14655 at 3078.305 kb on - strand, within BWI76_RS14655 at 3078.305 kb on - strand, within BWI76_RS14655 at 3078.305 kb on - strand at 3078.305 kb on - strand at 3078.356 kb on + strand, within BWI76_RS14655 at 3078.364 kb on - strand, within BWI76_RS14655 at 3078.364 kb on - strand, within BWI76_RS14655 at 3078.376 kb on - strand at 3078.829 kb on - strand at 3078.881 kb on + strand, within BWI76_RS14655 at 3078.889 kb on - strand, within BWI76_RS14655 at 3078.889 kb on - strand, within BWI76_RS14655 at 3078.943 kb on - strand at 3078.952 kb on + strand at 3078.960 kb on - strand at 3078.960 kb on - strand at 3079.044 kb on - strand at 3079.046 kb on + strand at 3079.046 kb on + strand at 3079.088 kb on + strand, within BWI76_RS14660 at 3079.511 kb on - strand at 3079.598 kb on + strand at 3079.601 kb on - strand at 3079.601 kb on - strand at 3079.603 kb on + strand at 3079.603 kb on + strand at 3079.603 kb on + strand at 3079.603 kb on + strand at 3079.606 kb on - strand at 3079.606 kb on - strand at 3079.606 kb on - strand at 3079.606 kb on - strand at 3079.611 kb on - strand at 3079.611 kb on - strand at 3079.611 kb on - strand at 3079.611 kb on - strand at 3079.611 kb on - strand at 3079.611 kb on - strand at 3079.611 kb on - strand at 3079.619 kb on + strand at 3079.619 kb on + strand at 3079.620 kb on + strand at 3079.620 kb on + strand at 3079.625 kb on + strand at 3079.625 kb on + strand at 3079.626 kb on - strand at 3079.627 kb on - strand at 3079.627 kb on - strand at 3079.627 kb on - strand at 3079.633 kb on - strand at 3079.633 kb on - strand at 3079.633 kb on - strand at 3079.633 kb on - strand at 3079.645 kb on - strand at 3079.689 kb on + strand at 3079.692 kb on + strand at 3079.692 kb on + strand at 3079.696 kb on + strand at 3079.696 kb on + strand at 3079.704 kb on - strand at 3079.704 kb on - strand at 3079.704 kb on - strand at 3079.704 kb on - strand at 3079.704 kb on - strand at 3079.727 kb on + strand at 3079.727 kb on + strand at 3079.727 kb on + strand at 3079.727 kb on + strand at 3079.730 kb on - strand at 3079.735 kb on - strand at 3079.749 kb on + strand at 3079.757 kb on + strand at 3079.761 kb on + strand at 3079.766 kb on + strand at 3079.766 kb on + strand at 3079.766 kb on + strand at 3079.766 kb on + strand at 3079.766 kb on + strand at 3079.766 kb on + strand at 3079.766 kb on + strand at 3079.766 kb on + strand at 3079.773 kb on + strand at 3079.773 kb on + strand at 3079.774 kb on - strand at 3079.774 kb on - strand at 3079.774 kb on - strand at 3079.774 kb on - strand at 3079.774 kb on - strand at 3079.784 kb on + strand at 3079.784 kb on + strand at 3079.792 kb on - strand at 3079.792 kb on - strand at 3079.792 kb on - strand at 3079.800 kb on + strand at 3079.803 kb on - strand at 3079.803 kb on - strand at 3079.805 kb on + strand at 3079.834 kb on + strand at 3079.837 kb on - strand at 3079.838 kb on - strand at 3079.889 kb on + strand at 3079.889 kb on + strand at 3079.897 kb on - strand at 3080.046 kb on - strand at 3080.046 kb on - strand at 3080.063 kb on - strand at 3080.110 kb on + strand at 3080.115 kb on + strand at 3080.123 kb on - strand at 3080.166 kb on - strand at 3080.290 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_1percent_glucose with Chloride 400 mM remove 3,078,041 + +1.3 3,078,046 + BWI76_RS14655 0.23 +0.9 3,078,046 + BWI76_RS14655 0.23 -0.7 3,078,046 + BWI76_RS14655 0.23 +0.8 3,078,046 + BWI76_RS14655 0.23 +0.3 3,078,049 - BWI76_RS14655 0.24 -2.0 3,078,054 - BWI76_RS14655 0.24 -0.4 3,078,054 - BWI76_RS14655 0.24 -1.0 3,078,160 + BWI76_RS14655 0.32 -0.1 3,078,168 - BWI76_RS14655 0.33 +1.1 3,078,170 + BWI76_RS14655 0.33 -0.5 3,078,183 - BWI76_RS14655 0.34 +0.1 3,078,184 - BWI76_RS14655 0.34 +0.3 3,078,186 + BWI76_RS14655 0.34 +0.1 3,078,193 + BWI76_RS14655 0.35 -1.5 3,078,195 + BWI76_RS14655 0.35 -1.3 3,078,195 + BWI76_RS14655 0.35 -0.4 3,078,195 + BWI76_RS14655 0.35 +1.0 3,078,197 + BWI76_RS14655 0.35 +2.9 3,078,203 - BWI76_RS14655 0.36 -0.7 3,078,213 - BWI76_RS14655 0.36 +0.3 3,078,226 - BWI76_RS14655 0.37 +0.3 3,078,262 + BWI76_RS14655 0.40 -1.3 3,078,270 - BWI76_RS14655 0.41 +0.3 3,078,305 - BWI76_RS14655 0.43 -2.8 3,078,305 - BWI76_RS14655 0.43 +1.3 3,078,305 - BWI76_RS14655 0.43 -0.0 3,078,305 - BWI76_RS14655 0.43 -1.5 3,078,305 - +1.3 3,078,305 - -1.0 3,078,356 + BWI76_RS14655 0.47 +3.0 3,078,364 - BWI76_RS14655 0.48 -1.6 3,078,364 - BWI76_RS14655 0.48 -0.7 3,078,376 - +1.3 3,078,829 - -0.3 3,078,881 + BWI76_RS14655 0.88 -2.7 3,078,889 - BWI76_RS14655 0.89 +1.3 3,078,889 - BWI76_RS14655 0.89 -1.2 3,078,943 - -0.6 3,078,952 + -0.9 3,078,960 - -0.3 3,078,960 - -2.3 3,079,044 - +2.9 3,079,046 + -0.4 3,079,046 + +1.3 3,079,088 + BWI76_RS14660 0.15 +1.3 3,079,511 - +1.9 3,079,598 + -0.6 3,079,601 - -0.1 3,079,601 - -0.2 3,079,603 + +0.2 3,079,603 + -3.1 3,079,603 + -2.1 3,079,603 + +1.3 3,079,606 - -0.0 3,079,606 - +0.5 3,079,606 - -0.2 3,079,606 - +0.8 3,079,611 - -0.5 3,079,611 - -0.8 3,079,611 - -0.1 3,079,611 - -0.6 3,079,611 - -0.1 3,079,611 - -0.2 3,079,611 - +0.8 3,079,619 + +1.3 3,079,619 + -1.9 3,079,620 + +0.4 3,079,620 + +1.3 3,079,625 + +0.7 3,079,625 + -1.7 3,079,626 - +0.4 3,079,627 - +0.3 3,079,627 - -2.6 3,079,627 - -0.3 3,079,633 - -0.6 3,079,633 - -0.4 3,079,633 - -0.0 3,079,633 - -0.2 3,079,645 - +0.5 3,079,689 + +1.1 3,079,692 + +0.6 3,079,692 + +1.9 3,079,696 + +1.8 3,079,696 + -2.2 3,079,704 - -2.8 3,079,704 - -0.3 3,079,704 - -0.8 3,079,704 - -0.7 3,079,704 - +0.3 3,079,727 + +0.2 3,079,727 + +1.5 3,079,727 + -0.0 3,079,727 + -0.9 3,079,730 - -0.4 3,079,735 - -0.6 3,079,749 + +1.3 3,079,757 + +0.7 3,079,761 + +1.9 3,079,766 + +1.3 3,079,766 + -0.7 3,079,766 + -1.1 3,079,766 + -2.4 3,079,766 + +0.1 3,079,766 + +0.9 3,079,766 + -0.0 3,079,766 + -0.7 3,079,773 + -1.6 3,079,773 + -0.3 3,079,774 - -1.5 3,079,774 - +0.6 3,079,774 - +0.1 3,079,774 - +1.3 3,079,774 - +1.3 3,079,784 + +0.7 3,079,784 + -0.8 3,079,792 - -0.3 3,079,792 - -0.3 3,079,792 - +0.3 3,079,800 + +0.0 3,079,803 - +0.5 3,079,803 - -0.3 3,079,805 + -0.0 3,079,834 + +0.3 3,079,837 - -0.2 3,079,838 - +1.3 3,079,889 + +0.8 3,079,889 + -0.2 3,079,897 - +0.2 3,080,046 - +0.6 3,080,046 - +0.4 3,080,063 - -0.5 3,080,110 + +0.6 3,080,115 + -0.7 3,080,123 - +0.3 3,080,166 - +2.0 3,080,290 - -0.9
Or see this region's nucleotide sequence