Experiment: Carbenicillin 0.0065 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0368 and Psest_0369 are separated by 102 nucleotides Psest_0369 and Psest_0370 are separated by 35 nucleotides
Psest_0368: Psest_0368 - Transcriptional regulator, at 393,951 to 394,865
_0368
Psest_0369: Psest_0369 - L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily, at 394,968 to 396,110
_0369
Psest_0370: Psest_0370 - Uncharacterized protein conserved in bacteria, at 396,146 to 397,666
_0370
Position (kb) 394
395
396
397 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 394.102 kb on - strand, within Psest_0368 at 394.283 kb on - strand, within Psest_0368 at 394.749 kb on + strand, within Psest_0368 at 394.836 kb on - strand at 394.980 kb on + strand at 394.980 kb on + strand at 394.980 kb on + strand at 394.980 kb on + strand at 395.059 kb on + strand at 395.059 kb on + strand at 395.060 kb on - strand at 395.132 kb on + strand, within Psest_0369 at 395.133 kb on - strand, within Psest_0369 at 395.151 kb on + strand, within Psest_0369 at 395.151 kb on + strand, within Psest_0369 at 395.181 kb on + strand, within Psest_0369 at 395.182 kb on - strand, within Psest_0369 at 395.182 kb on - strand, within Psest_0369 at 395.406 kb on + strand, within Psest_0369 at 395.406 kb on + strand, within Psest_0369 at 395.406 kb on + strand, within Psest_0369 at 395.406 kb on + strand, within Psest_0369 at 395.406 kb on + strand, within Psest_0369 at 395.406 kb on + strand, within Psest_0369 at 395.407 kb on - strand, within Psest_0369 at 395.407 kb on - strand, within Psest_0369 at 395.407 kb on - strand, within Psest_0369 at 395.407 kb on - strand, within Psest_0369 at 395.407 kb on - strand, within Psest_0369 at 395.915 kb on + strand, within Psest_0369 at 396.198 kb on + strand at 396.335 kb on - strand, within Psest_0370 at 396.344 kb on + strand, within Psest_0370 at 396.344 kb on + strand, within Psest_0370 at 396.531 kb on + strand, within Psest_0370 at 396.531 kb on + strand, within Psest_0370 at 396.532 kb on - strand, within Psest_0370 at 396.588 kb on + strand, within Psest_0370 at 396.588 kb on + strand, within Psest_0370 at 396.588 kb on + strand, within Psest_0370 at 396.589 kb on - strand, within Psest_0370 at 396.589 kb on - strand, within Psest_0370 at 396.589 kb on - strand, within Psest_0370 at 396.589 kb on - strand, within Psest_0370 at 396.589 kb on - strand, within Psest_0370 at 396.780 kb on + strand, within Psest_0370 at 396.781 kb on - strand, within Psest_0370 at 396.819 kb on + strand, within Psest_0370 at 396.819 kb on + strand, within Psest_0370 at 396.819 kb on + strand, within Psest_0370 at 396.819 kb on + strand, within Psest_0370 at 396.819 kb on + strand, within Psest_0370 at 396.819 kb on + strand, within Psest_0370 at 396.819 kb on + strand, within Psest_0370 at 396.819 kb on + strand, within Psest_0370 at 396.819 kb on + strand, within Psest_0370 at 396.820 kb on - strand, within Psest_0370
Per-strain Table
Position Strand Gene LocusTag Fraction Carbenicillin 0.0065 mg/ml remove 394,102 - Psest_0368 0.17 +1.0 394,283 - Psest_0368 0.36 -0.5 394,749 + Psest_0368 0.87 +1.4 394,836 - +0.1 394,980 + +0.6 394,980 + -0.5 394,980 + +1.6 394,980 + +0.6 395,059 + -1.9 395,059 + +0.2 395,060 - -0.5 395,132 + Psest_0369 0.14 -0.4 395,133 - Psest_0369 0.14 -0.7 395,151 + Psest_0369 0.16 -0.3 395,151 + Psest_0369 0.16 -0.3 395,181 + Psest_0369 0.19 -0.3 395,182 - Psest_0369 0.19 -1.0 395,182 - Psest_0369 0.19 -0.1 395,406 + Psest_0369 0.38 -0.4 395,406 + Psest_0369 0.38 -2.1 395,406 + Psest_0369 0.38 +0.3 395,406 + Psest_0369 0.38 -0.2 395,406 + Psest_0369 0.38 +0.4 395,406 + Psest_0369 0.38 -1.1 395,407 - Psest_0369 0.38 -0.7 395,407 - Psest_0369 0.38 -0.3 395,407 - Psest_0369 0.38 -1.1 395,407 - Psest_0369 0.38 -0.2 395,407 - Psest_0369 0.38 -0.7 395,915 + Psest_0369 0.83 +0.3 396,198 + +2.7 396,335 - Psest_0370 0.12 -3.1 396,344 + Psest_0370 0.13 +1.5 396,344 + Psest_0370 0.13 +0.7 396,531 + Psest_0370 0.25 -0.7 396,531 + Psest_0370 0.25 -0.3 396,532 - Psest_0370 0.25 -1.3 396,588 + Psest_0370 0.29 -1.1 396,588 + Psest_0370 0.29 +1.2 396,588 + Psest_0370 0.29 -0.9 396,589 - Psest_0370 0.29 +0.6 396,589 - Psest_0370 0.29 +2.0 396,589 - Psest_0370 0.29 +0.5 396,589 - Psest_0370 0.29 +0.6 396,589 - Psest_0370 0.29 +1.2 396,780 + Psest_0370 0.42 -1.3 396,781 - Psest_0370 0.42 -1.6 396,819 + Psest_0370 0.44 +0.8 396,819 + Psest_0370 0.44 -0.1 396,819 + Psest_0370 0.44 +0.4 396,819 + Psest_0370 0.44 +1.8 396,819 + Psest_0370 0.44 -0.7 396,819 + Psest_0370 0.44 +1.4 396,819 + Psest_0370 0.44 +1.3 396,819 + Psest_0370 0.44 -0.5 396,819 + Psest_0370 0.44 +1.2 396,820 - Psest_0370 0.44 -3.5
Or see this region's nucleotide sequence