Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3505

Experiment: Carbenicillin 0.0065 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.0065 mg/ml
3,677,436	+		Psest_3504	0.27	-0.4
3,677,436	+		Psest_3504	0.27	-1.1
3,677,437	-		Psest_3504	0.27	+0.2
3,677,440	+		Psest_3504	0.27	+0.2
3,677,440	+		Psest_3504	0.27	-1.9
3,677,441	-		Psest_3504	0.27	-1.6
3,677,441	-		Psest_3504	0.27	+1.4
3,677,441	-		Psest_3504	0.27	+1.1
3,677,441	-		Psest_3504	0.27	+1.0
3,677,441	-		Psest_3504	0.27	-2.3
3,677,441	-		Psest_3504	0.27	+0.3
3,677,441	-		Psest_3504	0.27	-0.1
3,677,441	-		Psest_3504	0.27	+1.3
3,677,442	+		Psest_3504	0.27	+0.7
3,677,442	+		Psest_3504	0.27	+0.6
3,677,443	-		Psest_3504	0.27	+2.6
3,677,443	-		Psest_3504	0.27	-0.4
3,677,443	-		Psest_3504	0.27	-2.5
3,677,443	-		Psest_3504	0.27	+1.2
3,677,443	-		Psest_3504	0.27	+0.8
3,677,443	-		Psest_3504	0.27	+2.9
3,677,443	-		Psest_3504	0.27	+0.5
3,677,443	-		Psest_3504	0.27	-0.1
3,677,569	+		Psest_3504	0.39	+0.6
3,677,569	+		Psest_3504	0.39	+2.6
3,677,569	+		Psest_3504	0.39	+0.4
3,677,569	+		Psest_3504	0.39	-0.4
3,677,569	+		Psest_3504	0.39	+1.6
3,677,569	+		Psest_3504	0.39	+1.8
3,677,570	-		Psest_3504	0.39	-0.9
3,677,570	-		Psest_3504	0.39	-1.2
3,677,570	-		Psest_3504	0.39	-0.2
3,677,587	+		Psest_3504	0.41	-2.4
3,677,593	+		Psest_3504	0.41	+1.3
3,677,758	-		Psest_3504	0.57	+1.0
3,677,863	+		Psest_3504	0.67	+0.5
3,677,864	-		Psest_3504	0.67	-0.8
3,677,887	+		Psest_3504	0.69	-2.7
3,677,888	-		Psest_3504	0.69	+0.4
3,677,888	-		Psest_3504	0.69	+0.1
3,677,888	-		Psest_3504	0.69	-0.5
3,677,891	-		Psest_3504	0.69	-0.5
3,677,928	+		Psest_3504	0.73	+1.4
3,678,064	+		Psest_3504	0.85	-1.2
3,678,064	+		Psest_3504	0.85	-1.2
3,678,064	+		Psest_3504	0.85	-1.9
3,678,064	+		Psest_3504	0.85	-0.0
3,678,064	+		Psest_3504	0.85	+0.1
3,678,064	+		Psest_3504	0.85	-1.0
3,678,064	+		Psest_3504	0.85	-2.1
3,678,064	+		Psest_3504	0.85	+1.3
3,678,065	-		Psest_3504	0.86	-0.6
3,678,065	-		Psest_3504	0.86	-0.1
3,678,065	-		Psest_3504	0.86	-0.2
3,678,065	-		Psest_3504	0.86	+0.4
3,678,065	-		Psest_3504	0.86	-2.4
3,678,065	-		Psest_3504	0.86	+1.3
3,678,127	+				+0.1
3,678,127	+				+1.0
3,678,128	-				+1.1
3,678,128	-				-1.3
3,678,128	-				-0.7
3,678,316	-				+1.7
3,678,339	+				-1.6
3,678,340	-				+1.7
3,678,742	+		Psest_3505	0.26	-0.8
3,678,742	+		Psest_3505	0.26	+0.1
3,678,742	+		Psest_3505	0.26	+1.4
3,678,742	+		Psest_3505	0.26	+1.2
3,678,742	+		Psest_3505	0.26	-1.2
3,678,742	+		Psest_3505	0.26	+1.1
3,678,742	+		Psest_3505	0.26	-3.0
3,678,743	-		Psest_3505	0.26	-0.6
3,678,743	-		Psest_3505	0.26	-1.1
3,678,743	-		Psest_3505	0.26	+0.4
3,678,743	-		Psest_3505	0.26	-0.6
3,678,743	-		Psest_3505	0.26	-2.6
3,678,743	-		Psest_3505	0.26	-0.0
3,678,743	-		Psest_3505	0.26	-0.3
3,678,746	+		Psest_3505	0.26	-1.7
3,678,746	+		Psest_3505	0.26	-1.2
3,678,747	-		Psest_3505	0.26	-1.8
3,678,747	-		Psest_3505	0.26	-1.8
3,679,403	+		Psest_3505	0.75	+0.8
3,679,412	+		Psest_3505	0.76	-3.2
3,679,412	+		Psest_3505	0.76	-0.6
3,679,412	+		Psest_3505	0.76	-0.6
3,679,412	+		Psest_3505	0.76	+0.1
3,679,412	+		Psest_3505	0.76	-2.7
3,679,413	-		Psest_3505	0.76	+1.2
3,679,413	-		Psest_3505	0.76	-2.4
3,679,413	-		Psest_3505	0.76	-2.2
3,679,413	-		Psest_3505	0.76	-1.3
3,679,776	-				+0.5
3,679,776	-				-0.2
3,679,837	+				+0.6
3,679,838	-				-0.2
3,679,888	-				+0.7
3,680,045	+				+3.0
3,680,045	+				+1.0
3,680,045	+				-0.9
3,680,045	+				+0.9
3,680,045	+				+0.2
3,680,046	-				-0.5
3,680,046	-				+0.7
3,680,046	-				+0.6
3,680,046	-				-0.5
3,680,294	+		Psest_3506	0.21	-0.0
3,680,294	+		Psest_3506	0.21	-1.7
3,680,294	+		Psest_3506	0.21	-2.5
3,680,295	-		Psest_3506	0.21	-0.6
3,680,295	-		Psest_3506	0.21	-0.1
3,680,295	-		Psest_3506	0.21	+0.5
3,680,295	-		Psest_3506	0.21	+0.0
3,680,295	-		Psest_3506	0.21	+0.1
3,680,531	+		Psest_3506	0.35	-0.2
3,680,531	+		Psest_3506	0.35	+2.5
3,680,531	+		Psest_3506	0.35	+0.3
3,680,531	+		Psest_3506	0.35	+0.8
3,680,531	+		Psest_3506	0.35	+3.0
3,680,531	+		Psest_3506	0.35	-0.2
3,680,531	+		Psest_3506	0.35	+1.0
3,680,531	+		Psest_3506	0.35	+2.1
3,680,531	+		Psest_3506	0.35	+0.2
3,680,531	+		Psest_3506	0.35	+0.7
3,680,531	+		Psest_3506	0.35	+0.1
3,680,531	+		Psest_3506	0.35	+0.5
3,680,531	+		Psest_3506	0.35	-0.6
3,680,531	+		Psest_3506	0.35	+0.9
3,680,531	+		Psest_3506	0.35	-2.4
3,680,531	+		Psest_3506	0.35	-0.9
3,680,531	+		Psest_3506	0.35	+0.3
3,680,531	+		Psest_3506	0.35	-1.4
3,680,531	+		Psest_3506	0.35	+1.2
3,680,531	+		Psest_3506	0.35	-1.9
3,680,531	+		Psest_3506	0.35	+2.3
3,680,531	+		Psest_3506	0.35	+0.9
3,680,532	-		Psest_3506	0.35	+0.6
3,680,532	-		Psest_3506	0.35	-0.5
3,680,532	-		Psest_3506	0.35	-1.5
3,680,532	-		Psest_3506	0.35	-0.7
3,680,532	-		Psest_3506	0.35	+0.5
3,680,532	-		Psest_3506	0.35	+0.8
3,680,532	-		Psest_3506	0.35	+0.0
3,680,532	-		Psest_3506	0.35	+1.3
3,680,532	-		Psest_3506	0.35	-0.6
3,680,532	-		Psest_3506	0.35	-1.1
3,680,532	-		Psest_3506	0.35	-0.4
3,680,532	-		Psest_3506	0.35	-0.7
3,680,532	-		Psest_3506	0.35	+0.6
3,680,532	-		Psest_3506	0.35	+2.5
3,680,532	-		Psest_3506	0.35	+2.2
3,680,532	-		Psest_3506	0.35	+1.5
3,680,532	-		Psest_3506	0.35	-0.3
3,680,532	-		Psest_3506	0.35	+0.9
3,680,546	+		Psest_3506	0.36	-1.3
3,680,546	+		Psest_3506	0.36	+1.2
3,680,546	+		Psest_3506	0.36	+2.2
3,680,547	-		Psest_3506	0.36	-0.9
3,680,645	+		Psest_3506	0.42	+0.5