Experiment: Carbenicillin 0.0065 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2667 and Psest_2668 overlap by 4 nucleotides Psest_2668 and Psest_2669 are separated by 16 nucleotides
Psest_2667: Psest_2667 - Uncharacterized protein involved in propionate catabolism, at 2,854,716 to 2,856,068
_2667
Psest_2668: Psest_2668 - Lactoylglutathione lyase and related lyases, at 2,856,065 to 2,856,568
_2668
Psest_2669: Psest_2669 - Acyl-CoA dehydrogenases, at 2,856,585 to 2,857,748
_2669
Position (kb)
2856
2857 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2855.627 kb on - strand, within Psest_2667 at 2855.839 kb on + strand, within Psest_2667 at 2856.138 kb on + strand, within Psest_2668 at 2856.138 kb on + strand, within Psest_2668 at 2856.402 kb on + strand, within Psest_2668 at 2856.403 kb on - strand, within Psest_2668 at 2856.403 kb on - strand, within Psest_2668 at 2856.403 kb on - strand, within Psest_2668 at 2856.403 kb on - strand, within Psest_2668 at 2856.403 kb on - strand, within Psest_2668 at 2856.464 kb on - strand, within Psest_2668 at 2856.464 kb on - strand, within Psest_2668 at 2856.572 kb on - strand at 2856.625 kb on + strand at 2856.626 kb on - strand at 2856.626 kb on - strand at 2856.664 kb on + strand at 2856.779 kb on - strand, within Psest_2669 at 2856.949 kb on + strand, within Psest_2669 at 2856.949 kb on + strand, within Psest_2669 at 2857.039 kb on + strand, within Psest_2669 at 2857.040 kb on - strand, within Psest_2669 at 2857.040 kb on - strand, within Psest_2669 at 2857.275 kb on - strand, within Psest_2669 at 2857.309 kb on + strand, within Psest_2669 at 2857.309 kb on + strand, within Psest_2669 at 2857.309 kb on + strand, within Psest_2669 at 2857.309 kb on + strand, within Psest_2669 at 2857.309 kb on + strand, within Psest_2669 at 2857.309 kb on + strand, within Psest_2669 at 2857.309 kb on + strand, within Psest_2669 at 2857.309 kb on + strand, within Psest_2669 at 2857.310 kb on - strand, within Psest_2669 at 2857.310 kb on - strand, within Psest_2669 at 2857.310 kb on - strand, within Psest_2669 at 2857.310 kb on - strand, within Psest_2669 at 2857.310 kb on - strand, within Psest_2669 at 2857.310 kb on - strand, within Psest_2669 at 2857.426 kb on + strand, within Psest_2669 at 2857.426 kb on + strand, within Psest_2669 at 2857.426 kb on + strand, within Psest_2669 at 2857.427 kb on - strand, within Psest_2669 at 2857.427 kb on - strand, within Psest_2669 at 2857.477 kb on + strand, within Psest_2669 at 2857.477 kb on + strand, within Psest_2669 at 2857.477 kb on + strand, within Psest_2669 at 2857.477 kb on + strand, within Psest_2669 at 2857.477 kb on + strand, within Psest_2669 at 2857.477 kb on + strand, within Psest_2669 at 2857.477 kb on + strand, within Psest_2669 at 2857.477 kb on + strand, within Psest_2669 at 2857.477 kb on + strand, within Psest_2669 at 2857.477 kb on + strand, within Psest_2669 at 2857.477 kb on + strand, within Psest_2669 at 2857.477 kb on + strand, within Psest_2669 at 2857.477 kb on + strand, within Psest_2669 at 2857.477 kb on + strand, within Psest_2669 at 2857.477 kb on + strand, within Psest_2669 at 2857.478 kb on - strand, within Psest_2669 at 2857.478 kb on - strand, within Psest_2669 at 2857.478 kb on - strand, within Psest_2669 at 2857.478 kb on - strand, within Psest_2669 at 2857.478 kb on - strand, within Psest_2669 at 2857.478 kb on - strand, within Psest_2669 at 2857.478 kb on - strand, within Psest_2669
Per-strain Table
Position Strand Gene LocusTag Fraction Carbenicillin 0.0065 mg/ml remove 2,855,627 - Psest_2667 0.67 +1.0 2,855,839 + Psest_2667 0.83 +1.0 2,856,138 + Psest_2668 0.14 -0.4 2,856,138 + Psest_2668 0.14 -0.1 2,856,402 + Psest_2668 0.67 +0.6 2,856,403 - Psest_2668 0.67 -0.8 2,856,403 - Psest_2668 0.67 -0.8 2,856,403 - Psest_2668 0.67 -1.8 2,856,403 - Psest_2668 0.67 +0.3 2,856,403 - Psest_2668 0.67 -0.8 2,856,464 - Psest_2668 0.79 -0.6 2,856,464 - Psest_2668 0.79 -0.9 2,856,572 - -0.6 2,856,625 + +0.3 2,856,626 - +0.3 2,856,626 - +0.2 2,856,664 + -0.9 2,856,779 - Psest_2669 0.17 -0.1 2,856,949 + Psest_2669 0.31 -1.5 2,856,949 + Psest_2669 0.31 +0.2 2,857,039 + Psest_2669 0.39 -0.8 2,857,040 - Psest_2669 0.39 +0.7 2,857,040 - Psest_2669 0.39 -0.6 2,857,275 - Psest_2669 0.59 -0.7 2,857,309 + Psest_2669 0.62 +1.3 2,857,309 + Psest_2669 0.62 +0.5 2,857,309 + Psest_2669 0.62 +1.4 2,857,309 + Psest_2669 0.62 -1.8 2,857,309 + Psest_2669 0.62 +1.5 2,857,309 + Psest_2669 0.62 -2.3 2,857,309 + Psest_2669 0.62 +1.8 2,857,309 + Psest_2669 0.62 +0.4 2,857,310 - Psest_2669 0.62 +0.9 2,857,310 - Psest_2669 0.62 -1.6 2,857,310 - Psest_2669 0.62 +0.4 2,857,310 - Psest_2669 0.62 +0.1 2,857,310 - Psest_2669 0.62 -0.1 2,857,310 - Psest_2669 0.62 +0.1 2,857,426 + Psest_2669 0.72 +0.8 2,857,426 + Psest_2669 0.72 +0.9 2,857,426 + Psest_2669 0.72 +0.4 2,857,427 - Psest_2669 0.72 -1.7 2,857,427 - Psest_2669 0.72 -0.8 2,857,477 + Psest_2669 0.77 +0.2 2,857,477 + Psest_2669 0.77 +0.8 2,857,477 + Psest_2669 0.77 -0.2 2,857,477 + Psest_2669 0.77 -1.9 2,857,477 + Psest_2669 0.77 -0.4 2,857,477 + Psest_2669 0.77 +0.1 2,857,477 + Psest_2669 0.77 +0.5 2,857,477 + Psest_2669 0.77 -1.4 2,857,477 + Psest_2669 0.77 -0.6 2,857,477 + Psest_2669 0.77 -0.6 2,857,477 + Psest_2669 0.77 +0.0 2,857,477 + Psest_2669 0.77 +0.5 2,857,477 + Psest_2669 0.77 -1.7 2,857,477 + Psest_2669 0.77 +1.2 2,857,477 + Psest_2669 0.77 +0.8 2,857,478 - Psest_2669 0.77 -0.2 2,857,478 - Psest_2669 0.77 +0.8 2,857,478 - Psest_2669 0.77 +1.5 2,857,478 - Psest_2669 0.77 -1.5 2,857,478 - Psest_2669 0.77 -0.6 2,857,478 - Psest_2669 0.77 +0.5 2,857,478 - Psest_2669 0.77 -0.3
Or see this region's nucleotide sequence