Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS31470

Experiment: p-Coumaric (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) 5 mM
1,894,982	+				+1.5
1,895,071	+				-0.5
1,895,071	+				+1.4
1,895,071	+				+0.3
1,895,071	+				+0.5
1,895,078	+				-0.5
1,895,078	+				+1.3
1,895,177	+				-1.7
1,895,177	+				-0.0
1,895,177	+				+0.5
1,895,177	+				+0.4
1,895,177	+				+0.9
1,895,248	-				+1.0
1,895,248	-				+1.2
1,895,248	-				+0.7
1,895,248	-				-0.4
1,895,248	-				-1.9
1,895,248	-				-0.5
1,895,248	-				-0.7
1,895,255	-				+0.1
1,895,552	-				-0.4
1,896,126	+		PFLU_RS31470	0.80	+0.0
1,896,126	+		PFLU_RS31470	0.80	+3.7
1,896,157	+		PFLU_RS31470	0.89	-1.1
1,896,157	+		PFLU_RS31470	0.89	-1.1
1,896,157	+		PFLU_RS31470	0.89	+1.1
1,896,157	+		PFLU_RS31470	0.89	+1.0
1,896,157	+		PFLU_RS31470	0.89	-0.1
1,896,158	-		PFLU_RS31470	0.89	-0.7
1,896,158	-		PFLU_RS31470	0.89	-1.0
1,896,158	-		PFLU_RS31470	0.89	-1.1
1,896,158	-		PFLU_RS31470	0.89	+0.9
1,896,161	+				+0.3
1,896,161	+				+0.5
1,896,161	+				-1.2
1,896,161	+				+0.8
1,896,161	+				+3.1
1,896,161	+				-1.3
1,896,161	+				-0.3
1,896,162	-				+1.7
1,896,162	-				-0.5
1,896,162	-				-1.2
1,896,162	-				-2.6
1,896,162	-				-2.1
1,896,162	-				-1.2
1,896,162	-				-0.7
1,896,162	-				-0.9
1,896,203	+				+0.5
1,896,203	+				-1.1
1,896,203	+				+0.3
1,896,204	-				+0.4
1,896,204	-				-0.4
1,896,204	-				-1.3
1,896,204	-				-0.0
1,896,204	-				-0.7
1,896,239	+				+2.9
1,896,239	+				+0.9
1,896,239	+				+1.3
1,896,239	+				-1.5
1,896,239	+				+0.5
1,896,240	-				-2.2
1,896,240	-				+1.6
1,896,240	-				-1.1
1,896,240	-				+0.7
1,896,240	-				-0.4
1,896,240	-				-1.4
1,896,240	-				-1.1
1,896,322	+				+1.3
1,896,415	+		PFLU_RS08505	0.13	-1.1
1,896,415	+		PFLU_RS08505	0.13	-0.9
1,896,415	+		PFLU_RS08505	0.13	-0.3
1,896,415	+		PFLU_RS08505	0.13	-1.4
1,896,415	+		PFLU_RS08505	0.13	-0.1
1,896,415	+		PFLU_RS08505	0.13	-2.1
1,896,415	+		PFLU_RS08505	0.13	-1.9
1,896,415	+		PFLU_RS08505	0.13	-2.5
1,896,415	+		PFLU_RS08505	0.13	+0.3
1,896,416	-		PFLU_RS08505	0.14	-0.1
1,896,416	-		PFLU_RS08505	0.14	-0.5
1,896,416	-		PFLU_RS08505	0.14	-0.3
1,896,416	-		PFLU_RS08505	0.14	-0.5
1,896,416	-		PFLU_RS08505	0.14	-0.9
1,896,416	-		PFLU_RS08505	0.14	-0.5
1,896,416	-		PFLU_RS08505	0.14	-0.5
1,896,416	-		PFLU_RS08505	0.14	-0.5
1,896,594	+		PFLU_RS08505	0.34	+0.3
1,896,594	+		PFLU_RS08505	0.34	-1.2
1,896,594	+		PFLU_RS08505	0.34	+1.3
1,896,594	+		PFLU_RS08505	0.34	-0.5
1,896,595	-		PFLU_RS08505	0.34	+0.3
1,896,595	-		PFLU_RS08505	0.34	+0.3
1,896,595	-		PFLU_RS08505	0.34	-0.1
1,896,595	-		PFLU_RS08505	0.34	+1.3
1,896,595	-		PFLU_RS08505	0.34	-0.5
1,896,595	-		PFLU_RS08505	0.34	+0.3
1,896,595	-		PFLU_RS08505	0.34	-1.1
1,896,595	-		PFLU_RS08505	0.34	-2.0
1,896,771	+		PFLU_RS08505	0.53	-1.1
1,896,771	+		PFLU_RS08505	0.53	-0.3
1,896,771	+		PFLU_RS08505	0.53	+0.7
1,896,772	-		PFLU_RS08505	0.54	-2.3
1,896,772	-		PFLU_RS08505	0.54	-0.1
1,896,855	+		PFLU_RS08505	0.63	+0.3
1,896,855	+		PFLU_RS08505	0.63	-1.8
1,896,855	+		PFLU_RS08505	0.63	-2.0
1,896,856	-		PFLU_RS08505	0.63	+0.3
1,896,856	-		PFLU_RS08505	0.63	-2.1
1,896,946	+		PFLU_RS08505	0.73	+0.3
1,897,189	+				+0.3
1,897,189	+				-0.9
1,897,189	+				-2.2
1,897,189	+				-2.7
1,897,189	+				-2.3
1,897,189	+				-0.9
1,897,189	+				-1.1
1,897,189	+				-0.9
1,897,189	+				-1.3
1,897,189	+				-1.7
1,897,189	+				-1.6
1,897,190	-				+1.3
1,897,190	-				-2.3
1,897,190	-				-0.9
1,897,190	-				-1.8
1,897,190	-				-1.1
1,897,190	-				+1.3
1,897,190	-				+2.3
1,897,190	-				-2.3
1,897,190	-				-0.1
1,897,190	-				+0.7
1,897,190	-				+1.3