Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS30800

Experiment: p-Coumaric (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) 5 mM
3,187,256	-		PFLU_RS14250	0.22	-1.8
3,187,430	+		PFLU_RS14250	0.36	+1.3
3,187,430	+		PFLU_RS14250	0.36	-1.3
3,187,442	+		PFLU_RS14250	0.37	-1.1
3,187,447	+		PFLU_RS14250	0.38	+0.9
3,187,448	-		PFLU_RS14250	0.38	-0.1
3,187,463	+		PFLU_RS14250	0.39	-1.8
3,187,560	+		PFLU_RS14250	0.47	-0.3
3,187,635	+		PFLU_RS14250	0.54	+0.2
3,187,741	+		PFLU_RS14250	0.63	-0.8
3,187,741	+		PFLU_RS14250	0.63	+1.8
3,187,743	+		PFLU_RS14250	0.63	-1.1
3,187,872	+		PFLU_RS14250	0.74	-0.4
3,187,872	+		PFLU_RS14250	0.74	+0.3
3,187,941	+		PFLU_RS14250	0.79	-0.8
3,188,018	+		PFLU_RS14250	0.86	-0.5
3,188,113	-				+0.5
3,188,113	-				-1.1
3,188,484	+		PFLU_RS30800	0.24	+0.2
3,188,506	+		PFLU_RS30800	0.26	-1.8
3,188,517	+		PFLU_RS30800	0.27	+1.0
3,188,551	+		PFLU_RS30800	0.31	-0.8
3,188,568	+		PFLU_RS30800	0.33	-1.5
3,188,568	+		PFLU_RS30800	0.33	-0.3
3,188,572	+		PFLU_RS30800	0.33	+1.7
3,188,572	+		PFLU_RS30800	0.33	-0.3
3,188,572	+		PFLU_RS30800	0.33	+2.0
3,188,573	-		PFLU_RS30800	0.33	+0.0
3,188,586	+		PFLU_RS30800	0.34	+3.6
3,188,617	+		PFLU_RS30800	0.38	-0.3
3,188,620	+		PFLU_RS30800	0.38	-0.1
3,188,647	+		PFLU_RS30800	0.41	+0.5
3,188,675	-		PFLU_RS30800	0.44	-1.3
3,188,685	+		PFLU_RS30800	0.45	+2.0
3,188,797	+		PFLU_RS30800	0.56	-1.0
3,188,797	+		PFLU_RS30800	0.56	-1.1
3,188,861	-		PFLU_RS30800	0.62	-0.3
3,188,891	-		PFLU_RS30800	0.66	-0.3
3,188,893	+		PFLU_RS30800	0.66	-0.3
3,188,908	+		PFLU_RS30800	0.67	-0.4
3,188,941	-		PFLU_RS30800	0.71	-0.3
3,189,203	-				-0.5
3,189,261	-				-1.0
3,189,290	-				-1.1
3,189,313	+				-1.1
3,189,317	+				+0.2
3,189,337	+				-0.1
3,189,383	-		PFLU_RS31610	0.11	-1.1
3,189,585	-		PFLU_RS31610	0.25	-2.2
3,189,657	+		PFLU_RS31610	0.30	+1.6
3,189,710	+		PFLU_RS31610	0.34	-1.3
3,189,711	-		PFLU_RS31610	0.34	+2.0
3,189,711	-		PFLU_RS31610	0.34	+0.0
3,189,779	+		PFLU_RS31610	0.39	-0.4
3,189,841	+		PFLU_RS31610	0.43	-0.9
3,189,845	+		PFLU_RS31610	0.44	-1.2
3,189,845	+		PFLU_RS31610	0.44	-1.0
3,189,846	-		PFLU_RS31610	0.44	-1.5
3,189,914	-		PFLU_RS31610	0.48	+0.5
3,189,942	+		PFLU_RS31610	0.50	-2.5
3,190,208	-		PFLU_RS31610	0.69	+0.5
3,190,226	-		PFLU_RS31610	0.70	+0.5