Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS26095

Experiment: p-Coumaric (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) 5 mM
5,830,046	+				+1.2
5,830,046	+				+0.3
5,830,046	+				+3.8
5,830,046	+				-0.6
5,830,046	+				+0.7
5,830,046	+				+0.6
5,830,070	+				-0.1
5,830,070	+				+0.9
5,830,079	+				+1.2
5,830,080	-				+0.7
5,830,080	-				+1.5
5,830,080	-				-0.4
5,830,105	+				+1.2
5,830,105	+				-0.5
5,830,105	+				+0.6
5,830,106	-				+0.9
5,830,106	-				+0.5
5,830,106	-				-2.3
5,830,118	+				+0.8
5,830,119	-				+0.8
5,830,168	+				+0.5
5,830,169	-				+0.2
5,830,169	-				-1.7
5,830,210	+				-1.2
5,830,266	+		PFLU_RS26095	0.26	-0.8
5,830,266	+		PFLU_RS26095	0.26	+0.2
5,830,267	-		PFLU_RS26095	0.27	-0.6
5,830,267	-		PFLU_RS26095	0.27	+0.0
5,830,267	-		PFLU_RS26095	0.27	-0.7
5,830,324	+		PFLU_RS26095	0.49	+0.9
5,830,341	+		PFLU_RS26095	0.56	+1.9
5,830,341	+		PFLU_RS26095	0.56	+1.9
5,830,343	+		PFLU_RS26095	0.56	-2.0
5,830,343	+		PFLU_RS26095	0.56	+0.5
5,830,343	+		PFLU_RS26095	0.56	+0.1
5,830,344	-		PFLU_RS26095	0.57	-2.1
5,830,363	+		PFLU_RS26095	0.64	+0.5
5,830,363	+		PFLU_RS26095	0.64	+1.6
5,830,364	-		PFLU_RS26095	0.65	-1.3
5,830,364	-		PFLU_RS26095	0.65	+0.9
5,830,365	+		PFLU_RS26095	0.65	+1.6
5,830,365	+		PFLU_RS26095	0.65	-2.3
5,830,365	+		PFLU_RS26095	0.65	-1.1
5,830,365	+		PFLU_RS26095	0.65	-0.1
5,830,365	+		PFLU_RS26095	0.65	-0.6
5,830,365	+		PFLU_RS26095	0.65	+0.3
5,830,365	+		PFLU_RS26095	0.65	-1.8
5,830,365	+		PFLU_RS26095	0.65	-1.5
5,830,365	+		PFLU_RS26095	0.65	-0.2
5,830,366	-		PFLU_RS26095	0.65	-0.7
5,830,366	-		PFLU_RS26095	0.65	+1.6
5,830,366	-		PFLU_RS26095	0.65	+0.7
5,830,366	-		PFLU_RS26095	0.65	-0.8
5,830,366	-		PFLU_RS26095	0.65	-0.5
5,830,366	-		PFLU_RS26095	0.65	-0.5
5,830,366	-		PFLU_RS26095	0.65	-0.3
5,830,366	-		PFLU_RS26095	0.65	+1.5
5,830,366	-		PFLU_RS26095	0.65	-0.7
5,830,408	-		PFLU_RS26095	0.82	-0.4
5,830,408	-		PFLU_RS26095	0.82	-1.3
5,830,430	+				-1.2
5,830,430	+				-3.1
5,830,431	-				+3.0
5,830,431	-				+0.2
5,830,433	-				-2.2
5,830,433	-				-1.6
5,830,474	+				+1.5
5,830,474	+				-0.7
5,830,475	-				-0.8
5,830,573	+				-0.7
5,830,591	+				-0.7
5,830,591	+				+0.8
5,830,591	+				-1.0
5,830,591	+				+1.5
5,830,591	+				+0.2
5,830,591	+				-0.3
5,830,638	+				-0.5
5,830,638	+				-1.8
5,830,638	+				+0.9
5,830,639	-				-1.8
5,830,654	+				-2.4
5,830,654	+				+0.9
5,830,654	+				+0.3
5,830,654	+				+2.5
5,830,654	+				+3.5
5,830,655	-				-2.4
5,830,655	-				-2.2
5,830,655	-				+0.8
5,830,658	+				+0.9
5,830,678	+				+1.9
5,830,714	+				-2.0
5,830,733	-				-1.6
5,830,769	+				-0.3
5,830,776	+				+1.4
5,830,776	+				+0.1
5,830,777	-				-0.2
5,830,780	+				-0.1
5,830,780	+				-2.0
5,830,780	+				+1.2
5,830,821	+				-0.8
5,830,900	+		PFLU_RS26100	0.14	+1.0
5,830,900	+		PFLU_RS26100	0.14	+0.2
5,830,901	-		PFLU_RS26100	0.14	+0.6
5,830,902	+		PFLU_RS26100	0.14	+0.5
5,830,995	+		PFLU_RS26100	0.23	+0.7
5,830,995	+		PFLU_RS26100	0.23	-0.9
5,830,995	+		PFLU_RS26100	0.23	-1.3
5,830,996	-		PFLU_RS26100	0.23	-0.3
5,830,996	-		PFLU_RS26100	0.23	+1.7
5,830,996	-		PFLU_RS26100	0.23	+1.2
5,830,996	-		PFLU_RS26100	0.23	+2.2
5,831,032	+		PFLU_RS26100	0.27	-0.7
5,831,033	-		PFLU_RS26100	0.27	-2.0
5,831,044	+		PFLU_RS26100	0.28	+0.5
5,831,044	+		PFLU_RS26100	0.28	+1.5
5,831,044	+		PFLU_RS26100	0.28	-1.8
5,831,044	+		PFLU_RS26100	0.28	+1.6
5,831,045	-		PFLU_RS26100	0.28	-0.8
5,831,045	-		PFLU_RS26100	0.28	-0.1
5,831,045	-		PFLU_RS26100	0.28	+2.2
5,831,084	-		PFLU_RS26100	0.32	+2.5
5,831,084	-		PFLU_RS26100	0.32	+0.1
5,831,084	-		PFLU_RS26100	0.32	+0.5
5,831,097	+		PFLU_RS26100	0.33	-0.8
5,831,098	-		PFLU_RS26100	0.33	-0.2
5,831,145	+		PFLU_RS26100	0.38	+0.5
5,831,145	+		PFLU_RS26100	0.38	+0.9
5,831,146	-		PFLU_RS26100	0.38	-0.3
5,831,146	-		PFLU_RS26100	0.38	-1.0
5,831,146	-		PFLU_RS26100	0.38	+0.2
5,831,185	+		PFLU_RS26100	0.41	+1.2
5,831,185	+		PFLU_RS26100	0.41	-1.3
5,831,185	+		PFLU_RS26100	0.41	+1.3
5,831,185	+		PFLU_RS26100	0.41	+1.1
5,831,186	-		PFLU_RS26100	0.42	-2.2
5,831,213	-		PFLU_RS26100	0.44	-1.1
5,831,213	-		PFLU_RS26100	0.44	-0.7
5,831,213	-		PFLU_RS26100	0.44	+1.0
5,831,221	+		PFLU_RS26100	0.45	-1.3
5,831,222	-		PFLU_RS26100	0.45	-1.8
5,831,222	-		PFLU_RS26100	0.45	-1.0
5,831,265	+		PFLU_RS26100	0.49	-0.1
5,831,265	+		PFLU_RS26100	0.49	+0.4
5,831,265	+		PFLU_RS26100	0.49	+1.5
5,831,266	-		PFLU_RS26100	0.49	-0.3
5,831,314	-		PFLU_RS26100	0.54	+1.1
5,831,334	+		PFLU_RS26100	0.56	-1.2
5,831,334	+		PFLU_RS26100	0.56	-1.6
5,831,334	+		PFLU_RS26100	0.56	-0.1
5,831,334	+		PFLU_RS26100	0.56	-1.0
5,831,335	-		PFLU_RS26100	0.56	-0.1
5,831,335	-		PFLU_RS26100	0.56	-2.5
5,831,359	-		PFLU_RS26100	0.58	-1.7
5,831,385	-		PFLU_RS26100	0.61	-0.3
5,831,445	+		PFLU_RS26100	0.66	+0.9