Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21535

Experiment: p-Coumaric (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) 5 mM
4,855,566	-		PFLU_RS31750	0.35	+0.4
4,855,621	+		PFLU_RS31750	0.61	-0.7
4,855,621	+		PFLU_RS31750	0.61	+0.5
4,855,621	+		PFLU_RS31750	0.61	-0.7
4,855,621	+		PFLU_RS31750	0.61	-1.4
4,855,621	+		PFLU_RS31750	0.61	+0.1
4,855,622	-		PFLU_RS31750	0.62	+0.5
4,855,622	-		PFLU_RS31750	0.62	-2.1
4,855,622	-		PFLU_RS31750	0.62	+1.2
4,855,622	-		PFLU_RS31750	0.62	-0.4
4,855,622	-		PFLU_RS31750	0.62	-1.2
4,855,622	-		PFLU_RS31750	0.62	+1.5
4,855,622	-		PFLU_RS31750	0.62	-0.5
4,855,622	-		PFLU_RS31750	0.62	+0.9
4,855,622	-		PFLU_RS31750	0.62	+0.6
4,855,622	-		PFLU_RS31750	0.62	-0.2
4,855,622	-		PFLU_RS31750	0.62	-0.8
4,855,622	-		PFLU_RS31750	0.62	+0.4
4,855,757	+		PFLU_RS21530	0.16	-0.2
4,855,758	-		PFLU_RS21530	0.17	+3.1
4,855,766	+		PFLU_RS21530	0.18	+1.6
4,855,766	+		PFLU_RS21530	0.18	-0.9
4,855,766	+		PFLU_RS21530	0.18	+1.5
4,855,766	+		PFLU_RS21530	0.18	+3.5
4,855,766	+		PFLU_RS21530	0.18	+1.7
4,855,766	+		PFLU_RS21530	0.18	+1.8
4,855,767	-		PFLU_RS21530	0.18	+0.4
4,855,767	-		PFLU_RS21530	0.18	+1.5
4,855,767	-		PFLU_RS21530	0.18	-3.0
4,855,767	-		PFLU_RS21530	0.18	-0.6
4,855,767	-		PFLU_RS21530	0.18	-1.7
4,855,767	-		PFLU_RS21530	0.18	-1.7
4,855,767	-		PFLU_RS21530	0.18	-3.3
4,855,827	+		PFLU_RS21530	0.25	+2.4
4,855,827	+		PFLU_RS21530	0.25	+2.1
4,855,827	+		PFLU_RS21530	0.25	+1.0
4,855,828	-		PFLU_RS21530	0.25	+0.8
4,855,828	-		PFLU_RS21530	0.25	+0.4
4,855,828	-		PFLU_RS21530	0.25	-0.9
4,855,828	-		PFLU_RS21530	0.25	+0.1
4,855,841	+		PFLU_RS21530	0.27	-0.9
4,855,841	+		PFLU_RS21530	0.27	-0.3
4,855,841	+		PFLU_RS21530	0.27	+2.0
4,855,842	-		PFLU_RS21530	0.27	+2.3
4,855,842	-		PFLU_RS21530	0.27	-0.8
4,855,842	-		PFLU_RS21530	0.27	-0.8
4,855,910	+		PFLU_RS21530	0.36	+1.0
4,855,910	+		PFLU_RS21530	0.36	+0.8
4,855,910	+		PFLU_RS21530	0.36	+1.0
4,855,910	+		PFLU_RS21530	0.36	+0.4
4,855,910	+		PFLU_RS21530	0.36	+0.2
4,855,910	+		PFLU_RS21530	0.36	+1.2
4,855,910	+		PFLU_RS21530	0.36	+1.5
4,855,910	+		PFLU_RS21530	0.36	+1.8
4,855,910	+		PFLU_RS21530	0.36	-1.1
4,855,910	+		PFLU_RS21530	0.36	+3.1
4,855,910	+		PFLU_RS21530	0.36	+1.1
4,855,911	-		PFLU_RS21530	0.36	+0.9
4,855,911	-		PFLU_RS21530	0.36	-0.2
4,855,911	-		PFLU_RS21530	0.36	-1.7
4,855,911	-		PFLU_RS21530	0.36	-0.9
4,855,911	-		PFLU_RS21530	0.36	+0.4
4,855,911	-		PFLU_RS21530	0.36	+0.2
4,855,911	-		PFLU_RS21530	0.36	+2.1
4,855,911	-		PFLU_RS21530	0.36	+2.2
4,855,943	+		PFLU_RS21530	0.40	-1.2
4,855,943	+		PFLU_RS21530	0.40	+0.9
4,855,943	+		PFLU_RS21530	0.40	+0.2
4,855,943	+		PFLU_RS21530	0.40	-2.2
4,855,943	+		PFLU_RS21530	0.40	-0.7
4,855,943	+		PFLU_RS21530	0.40	+1.5
4,855,943	+		PFLU_RS21530	0.40	-1.3
4,855,943	+		PFLU_RS21530	0.40	-0.1
4,855,943	+		PFLU_RS21530	0.40	+0.8
4,855,943	+		PFLU_RS21530	0.40	+0.3
4,855,943	+		PFLU_RS21530	0.40	+0.0
4,855,943	+		PFLU_RS21530	0.40	-0.5
4,855,943	+		PFLU_RS21530	0.40	-0.6
4,855,943	+		PFLU_RS21530	0.40	-0.7
4,855,943	+		PFLU_RS21530	0.40	-0.6
4,855,943	+		PFLU_RS21530	0.40	-1.8
4,855,943	+		PFLU_RS21530	0.40	-1.4
4,855,943	+		PFLU_RS21530	0.40	-0.2
4,855,943	+		PFLU_RS21530	0.40	+0.6
4,855,943	+		PFLU_RS21530	0.40	-0.2
4,855,943	+		PFLU_RS21530	0.40	-2.1
4,855,944	-		PFLU_RS21530	0.40	+1.6
4,855,944	-		PFLU_RS21530	0.40	+1.0
4,855,944	-		PFLU_RS21530	0.40	+0.3
4,855,944	-		PFLU_RS21530	0.40	+1.0
4,855,944	-		PFLU_RS21530	0.40	-1.0
4,855,944	-		PFLU_RS21530	0.40	+1.2
4,855,944	-		PFLU_RS21530	0.40	+0.1
4,855,944	-		PFLU_RS21530	0.40	-0.1
4,855,944	-		PFLU_RS21530	0.40	+0.9
4,855,944	-		PFLU_RS21530	0.40	-0.7
4,855,944	-		PFLU_RS21530	0.40	-2.6
4,855,944	-		PFLU_RS21530	0.40	-0.3
4,855,944	-		PFLU_RS21530	0.40	-0.8
4,855,944	-		PFLU_RS21530	0.40	-1.8
4,855,944	-		PFLU_RS21530	0.40	-1.4
4,855,944	-		PFLU_RS21530	0.40	-0.2
4,855,944	-		PFLU_RS21530	0.40	-0.2
4,855,944	-		PFLU_RS21530	0.40	+1.1
4,855,944	-		PFLU_RS21530	0.40	-0.8
4,855,944	-		PFLU_RS21530	0.40	+2.0
4,855,944	-		PFLU_RS21530	0.40	-1.9
4,855,944	-		PFLU_RS21530	0.40	-0.5
4,855,976	+		PFLU_RS21530	0.44	-0.9
4,855,977	-		PFLU_RS21530	0.44	-0.6
4,855,977	-		PFLU_RS21530	0.44	-1.1
4,855,983	-		PFLU_RS21530	0.45	+5.9
4,856,027	+		PFLU_RS21530	0.51	+2.2
4,856,028	-		PFLU_RS21530	0.51	+1.1
4,856,142	+		PFLU_RS21530	0.65	+3.2
4,856,142	+		PFLU_RS21530	0.65	+1.5
4,856,142	+		PFLU_RS21530	0.65	+0.5
4,856,142	+		PFLU_RS21530	0.65	+1.3
4,856,142	+		PFLU_RS21530	0.65	-2.8
4,856,143	-		PFLU_RS21530	0.65	-1.7
4,856,143	-		PFLU_RS21530	0.65	+1.8
4,856,143	-		PFLU_RS21530	0.65	-0.9
4,856,143	-		PFLU_RS21530	0.65	+2.5
4,856,143	-		PFLU_RS21530	0.65	-1.8
4,856,216	+		PFLU_RS21530	0.75	+1.2
4,856,216	+		PFLU_RS21530	0.75	-1.9
4,856,217	-		PFLU_RS21530	0.75	+2.3
4,856,297	+		PFLU_RS21530	0.85	+0.0
4,856,297	+		PFLU_RS21530	0.85	-0.9
4,856,297	+		PFLU_RS21530	0.85	-0.8
4,856,297	+		PFLU_RS21530	0.85	-1.0
4,856,297	+		PFLU_RS21530	0.85	-0.1
4,856,298	-		PFLU_RS21530	0.85	+0.4
4,856,298	-		PFLU_RS21530	0.85	-1.6
4,856,298	-		PFLU_RS21530	0.85	-1.0
4,856,298	-		PFLU_RS21530	0.85	-0.6
4,856,382	+				-0.7
4,856,382	+				-1.3
4,856,382	+				+0.9
4,856,382	+				-0.3
4,856,382	+				-0.7
4,856,383	-				-1.1
4,856,383	-				+0.5
4,856,383	-				-1.1
4,856,383	-				-1.1
4,856,383	-				-0.9
4,856,383	-				+0.7
4,856,441	+				+0.9
4,856,450	+				+2.0
4,856,450	+				+0.1
4,856,455	+				+1.6
4,856,455	+				+1.8
4,856,456	-				+1.2
4,856,456	-				-0.1
4,856,456	-				+0.7
4,856,499	+				+2.0
4,856,499	+				-1.2
4,856,499	+				-0.2
4,856,499	+				-2.9
4,856,500	-				+0.8
4,856,632	+		PFLU_RS21535	0.20	+0.2
4,856,633	-		PFLU_RS21535	0.20	-1.8
4,856,652	+		PFLU_RS21535	0.23	-0.8
4,856,652	+		PFLU_RS21535	0.23	-3.0
4,856,652	+		PFLU_RS21535	0.23	-0.7
4,856,652	+		PFLU_RS21535	0.23	-0.4
4,856,652	+		PFLU_RS21535	0.23	-0.6
4,856,652	+		PFLU_RS21535	0.23	-1.7
4,856,652	+		PFLU_RS21535	0.23	-0.8
4,856,653	-		PFLU_RS21535	0.23	+1.0
4,856,653	-		PFLU_RS21535	0.23	-2.8
4,856,678	+		PFLU_RS21535	0.27	-1.4
4,856,678	+		PFLU_RS21535	0.27	-1.8
4,856,678	+		PFLU_RS21535	0.27	-1.1
4,856,678	+		PFLU_RS21535	0.27	-1.9
4,856,679	-		PFLU_RS21535	0.27	-1.4
4,856,700	+		PFLU_RS21535	0.30	+1.2
4,856,700	+		PFLU_RS21535	0.30	-0.9
4,856,700	+		PFLU_RS21535	0.30	+0.4
4,856,700	+		PFLU_RS21535	0.30	-1.7
4,856,700	+		PFLU_RS21535	0.30	-0.1
4,856,700	+		PFLU_RS21535	0.30	-1.6
4,856,700	+		PFLU_RS21535	0.30	-1.4
4,856,700	+		PFLU_RS21535	0.30	-0.8
4,856,700	+		PFLU_RS21535	0.30	-1.5
4,856,700	+		PFLU_RS21535	0.30	+0.2
4,856,700	+		PFLU_RS21535	0.30	-1.2
4,856,700	+		PFLU_RS21535	0.30	+1.2
4,856,701	-		PFLU_RS21535	0.31	-2.8
4,856,701	-		PFLU_RS21535	0.31	-1.6
4,856,701	-		PFLU_RS21535	0.31	-1.1
4,856,701	-		PFLU_RS21535	0.31	-0.6
4,856,701	-		PFLU_RS21535	0.31	+0.2
4,856,701	-		PFLU_RS21535	0.31	+3.0
4,856,701	-		PFLU_RS21535	0.31	-1.5
4,856,701	-		PFLU_RS21535	0.31	-0.6
4,856,701	-		PFLU_RS21535	0.31	+1.2
4,856,701	-		PFLU_RS21535	0.31	-2.5
4,856,701	-		PFLU_RS21535	0.31	-2.4
4,856,701	-		PFLU_RS21535	0.31	-1.4
4,856,760	+		PFLU_RS21535	0.40	-2.0
4,856,761	-		PFLU_RS21535	0.40	-0.4
4,856,889	+		PFLU_RS21535	0.61	-3.2
4,856,889	+		PFLU_RS21535	0.61	-1.1
4,856,889	+		PFLU_RS21535	0.61	-1.6
4,856,889	+		PFLU_RS21535	0.61	-1.2
4,856,889	+		PFLU_RS21535	0.61	-1.2
4,856,889	+		PFLU_RS21535	0.61	+0.2
4,856,889	+		PFLU_RS21535	0.61	+0.6
4,856,889	+		PFLU_RS21535	0.61	-2.7
4,856,889	+		PFLU_RS21535	0.61	-0.9
4,856,889	+		PFLU_RS21535	0.61	-1.9
4,856,890	-		PFLU_RS21535	0.61	-0.0
4,856,890	-		PFLU_RS21535	0.61	-0.2
4,856,890	-		PFLU_RS21535	0.61	+0.6
4,856,890	-		PFLU_RS21535	0.61	-1.9
4,856,890	-		PFLU_RS21535	0.61	-1.7
4,856,890	-		PFLU_RS21535	0.61	-0.9
4,856,890	-		PFLU_RS21535	0.61	-1.4
4,857,146	+				-1.1
4,857,146	+				-1.7
4,857,146	+				-2.8
4,857,146	+				-0.4
4,857,147	-				+0.6
4,857,147	-				-1.6
4,857,147	-				+1.2
4,857,175	+				+1.2
4,857,176	-				-1.4
4,857,361	-				-2.2
4,857,380	+				+0.7
4,857,380	+				+0.6
4,857,381	-				+0.2
4,857,381	-				-1.5
4,857,484	+		PFLU_RS21540	0.11	+0.1
4,857,484	+		PFLU_RS21540	0.11	-1.4
4,857,485	-		PFLU_RS21540	0.11	-0.1
4,857,485	-		PFLU_RS21540	0.11	+0.2
4,857,722	+		PFLU_RS21540	0.24	+0.4
4,857,742	+		PFLU_RS21540	0.26	-2.2
4,857,851	+		PFLU_RS21540	0.32	-1.5
4,857,851	+		PFLU_RS21540	0.32	-1.3
4,857,851	+		PFLU_RS21540	0.32	-0.1
4,857,851	+		PFLU_RS21540	0.32	-0.6
4,857,851	+		PFLU_RS21540	0.32	-0.4
4,857,852	-		PFLU_RS21540	0.32	-0.7
4,857,886	+		PFLU_RS21540	0.34	-1.3
4,857,886	+		PFLU_RS21540	0.34	-2.3
4,857,886	+		PFLU_RS21540	0.34	-1.2
4,857,886	+		PFLU_RS21540	0.34	-1.6
4,857,886	+		PFLU_RS21540	0.34	+0.7
4,857,886	+		PFLU_RS21540	0.34	-0.8
4,857,886	+		PFLU_RS21540	0.34	-0.5
4,857,886	+		PFLU_RS21540	0.34	-2.3
4,857,886	+		PFLU_RS21540	0.34	-0.3
4,857,887	-		PFLU_RS21540	0.34	-0.2
4,857,887	-		PFLU_RS21540	0.34	-0.3
4,857,887	-		PFLU_RS21540	0.34	+1.9
4,857,887	-		PFLU_RS21540	0.34	-2.1
4,857,887	-		PFLU_RS21540	0.34	+0.1
4,857,887	-		PFLU_RS21540	0.34	+1.8
4,857,951	-		PFLU_RS21540	0.37	-1.9
4,857,951	-		PFLU_RS21540	0.37	+0.8
4,858,067	+		PFLU_RS21540	0.44	+2.0
4,858,067	+		PFLU_RS21540	0.44	+3.6
4,858,068	-		PFLU_RS21540	0.44	-1.1
4,858,091	+		PFLU_RS21540	0.45	-0.2
4,858,091	+		PFLU_RS21540	0.45	-0.3
4,858,091	+		PFLU_RS21540	0.45	-0.3
4,858,092	-		PFLU_RS21540	0.45	-0.5
4,858,092	-		PFLU_RS21540	0.45	-0.6
4,858,092	-		PFLU_RS21540	0.45	-1.8