Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS18140

Experiment: p-Coumaric (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) 5 mM
4,114,267	+		PFLU_RS18135	0.32	-0.7
4,114,268	-		PFLU_RS18135	0.32	-1.8
4,114,324	+		PFLU_RS18135	0.38	-1.6
4,114,324	+		PFLU_RS18135	0.38	-2.8
4,114,325	-		PFLU_RS18135	0.38	+1.0
4,114,692	-		PFLU_RS18135	0.73	-1.2
4,114,963	-				-1.4
4,114,998	+				-1.5
4,114,999	-				+2.7
4,114,999	-				+0.7
4,115,035	+				-2.0
4,115,036	-				+0.8
4,115,036	-				-0.1
4,115,114	+				-2.4
4,115,114	+				+0.4
4,115,115	-				-0.7
4,115,181	+				-1.0
4,115,344	-		PFLU_RS18140	0.11	-0.1
4,115,344	-		PFLU_RS18140	0.11	+1.0
4,115,344	-		PFLU_RS18140	0.11	-1.0
4,115,344	-		PFLU_RS18140	0.11	+1.4
4,115,888	+		PFLU_RS18140	0.52	-1.5
4,115,889	-		PFLU_RS18140	0.52	+0.3
4,116,126	-		PFLU_RS18140	0.70	-0.8
4,116,196	+		PFLU_RS18140	0.75	+0.6
4,116,196	+		PFLU_RS18140	0.75	+0.4
4,116,199	+		PFLU_RS18140	0.75	+0.3
4,116,200	-		PFLU_RS18140	0.75	-1.5
4,116,200	-		PFLU_RS18140	0.75	+1.0
4,116,253	+		PFLU_RS18140	0.79	-1.5
4,116,379	-		PFLU_RS18140	0.89	+0.8
4,116,412	+				+0.8
4,116,412	+				+2.9
4,116,413	-				-1.6
4,116,413	-				-1.2
4,116,413	-				+1.1
4,116,413	-				-1.0
4,116,415	+				-0.2
4,116,415	+				-2.1
4,116,416	-				-1.0
4,116,416	-				+2.5
4,116,416	-				+1.2
4,116,416	-				-1.0
4,116,430	+				-1.5
4,116,430	+				+2.1
4,116,430	+				+2.1
4,116,588	+				+0.8
4,116,588	+				-0.5
4,116,588	+				+0.9
4,116,589	-				+3.7
4,116,589	-				-1.1
4,116,591	+				+1.0
4,116,591	+				+0.2
4,116,591	+				+1.7
4,116,592	-				-0.5
4,116,592	-				-1.1
4,116,592	-				-0.1
4,116,592	-				+1.4
4,116,592	-				+2.1
4,116,592	-				+0.3
4,116,592	-				-1.7
4,116,592	-				+0.1
4,116,592	-				+0.4
4,116,651	+		PFLU_RS18145	0.14	-1.8
4,116,651	+		PFLU_RS18145	0.14	+0.0
4,116,651	+		PFLU_RS18145	0.14	-0.6
4,116,651	+		PFLU_RS18145	0.14	+0.5
4,116,651	+		PFLU_RS18145	0.14	+0.7
4,116,817	+		PFLU_RS18145	0.32	-1.8
4,116,817	+		PFLU_RS18145	0.32	-1.6
4,116,818	-		PFLU_RS18145	0.32	-0.0
4,116,818	-		PFLU_RS18145	0.32	-0.2
4,116,818	-		PFLU_RS18145	0.32	-1.7
4,116,831	+		PFLU_RS18145	0.33	-1.0
4,116,832	-		PFLU_RS18145	0.33	+0.1
4,116,843	+		PFLU_RS18145	0.34	+0.2
4,116,843	+		PFLU_RS18145	0.34	-2.1
4,116,843	+		PFLU_RS18145	0.34	-1.7
4,116,844	-		PFLU_RS18145	0.34	+2.3
4,116,844	-		PFLU_RS18145	0.34	-1.5
4,116,984	+		PFLU_RS18145	0.49	-1.6
4,117,049	-		PFLU_RS18145	0.56	+0.5
4,117,167	+		PFLU_RS18145	0.69	+0.6
4,117,168	-		PFLU_RS18145	0.69	-1.5
4,117,170	+		PFLU_RS18145	0.69	+0.7
4,117,170	+		PFLU_RS18145	0.69	+1.5
4,117,171	-		PFLU_RS18145	0.69	+1.4
4,117,171	-		PFLU_RS18145	0.69	-0.8
4,117,375	-				-0.4
4,117,375	-				+0.4
4,117,498	-				+0.1
4,117,498	-				+0.1