Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13375

Experiment: p-Coumaric (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) 5 mM
3,019,859	+				-2.5
3,019,862	+				-1.1
3,019,862	+				-0.2
3,019,862	+				-0.7
3,019,862	+				+1.8
3,019,862	+				+0.2
3,019,862	+				+0.7
3,019,863	-				+3.0
3,019,863	-				+2.7
3,019,863	-				-0.5
3,019,863	-				+0.1
3,019,924	+		PFLU_RS13365	0.16	+1.1
3,019,925	-		PFLU_RS13365	0.16	+0.5
3,020,148	-		PFLU_RS13365	0.72	-0.6
3,020,196	+		PFLU_RS13365	0.84	-0.2
3,020,278	+				+4.9
3,020,279	-				-1.6
3,020,297	+				+1.3
3,020,297	+				-1.8
3,020,298	-				+1.2
3,020,298	-				-0.6
3,020,298	-				-1.6
3,020,303	+				+0.5
3,020,304	-				+1.3
3,020,304	-				+0.5
3,020,304	-				+0.1
3,020,304	-				-0.7
3,020,304	-				+2.7
3,020,376	-		PFLU_RS13370	0.14	-0.3
3,020,481	+		PFLU_RS13370	0.53	+2.2
3,020,590	+				+0.1
3,020,590	+				-2.0
3,020,590	+				+0.9
3,020,591	-				+0.0
3,020,591	-				-0.6
3,020,591	-				-1.0
3,020,628	+				-0.7
3,020,628	+				+1.2
3,020,629	-				-0.6
3,020,656	-				+0.5
3,020,666	+				+1.1
3,020,666	+				-2.4
3,020,673	+				-1.4
3,020,673	+				-1.4
3,020,674	-				+0.8
3,020,674	-				+1.1
3,020,674	-				+0.5
3,020,868	+		PFLU_RS13375	0.19	+1.1
3,020,869	-		PFLU_RS13375	0.19	-1.1
3,020,869	-		PFLU_RS13375	0.19	+1.6
3,020,942	+		PFLU_RS13375	0.27	-0.0
3,020,943	-		PFLU_RS13375	0.27	-0.6
3,020,943	-		PFLU_RS13375	0.27	-2.7
3,021,332	+		PFLU_RS13375	0.68	+1.3
3,021,333	-		PFLU_RS13375	0.68	-1.1
3,021,333	-		PFLU_RS13375	0.68	-0.9
3,021,333	-		PFLU_RS13375	0.68	-1.7
3,021,333	-		PFLU_RS13375	0.68	+0.5
3,021,428	-		PFLU_RS13375	0.78	-0.2
3,021,551	+				+4.1
3,021,551	+				+1.1
3,021,551	+				+1.6
3,021,551	+				+0.7
3,021,551	+				+2.3
3,021,551	+				-1.3
3,021,551	+				+0.4
3,021,552	-				+1.4
3,021,552	-				+5.9
3,021,552	-				-0.9
3,021,552	-				-1.7
3,021,626	+				-0.2
3,021,626	+				-0.5
3,021,626	+				-1.8
3,021,626	+				+2.5
3,021,626	+				-0.7
3,021,626	+				+0.8
3,021,626	+				+1.3
3,021,626	+				-0.4
3,021,626	+				+0.8
3,021,626	+				-2.2
3,021,626	+				+0.3
3,021,627	-				-0.5
3,021,627	-				+1.6
3,021,627	-				+1.4
3,021,627	-				+1.5
3,021,627	-				-0.4
3,021,627	-				-1.9
3,021,627	-				+1.8
3,021,627	-				-2.4
3,021,627	-				-0.6
3,021,630	+				-0.9
3,021,630	+				-2.0
3,021,630	+				+0.9
3,021,630	+				+1.2
3,021,630	+				-0.5
3,021,630	+				+0.6
3,021,630	+				+1.0
3,021,631	-				-0.8
3,021,631	-				-1.9
3,021,631	-				+0.3
3,021,631	-				+2.1
3,021,631	-				+1.7
3,021,631	-				+3.7
3,021,631	-				-1.1
3,021,631	-				+0.3
3,021,669	-				+0.9
3,021,677	+				+2.1
3,021,678	-				-1.8
3,021,678	-				-1.9
3,021,678	-				+0.3
3,021,689	+				-0.9
3,021,690	-				-0.1
3,021,962	+		PFLU_RS13380	0.22	+1.1
3,021,963	-		PFLU_RS13380	0.22	+0.5
3,022,301	+		PFLU_RS13380	0.44	-1.5
3,022,301	+		PFLU_RS13380	0.44	-1.5
3,022,301	+		PFLU_RS13380	0.44	-0.9
3,022,301	+		PFLU_RS13380	0.44	+0.4
3,022,301	+		PFLU_RS13380	0.44	+0.5
3,022,301	+		PFLU_RS13380	0.44	-0.5
3,022,301	+		PFLU_RS13380	0.44	-1.4
3,022,302	-		PFLU_RS13380	0.44	-0.5
3,022,302	-		PFLU_RS13380	0.44	+0.7
3,022,565	+		PFLU_RS13380	0.62	+1.7
3,022,589	+		PFLU_RS13380	0.64	+0.1
3,022,589	+		PFLU_RS13380	0.64	-1.1
3,022,590	-		PFLU_RS13380	0.64	+0.1
3,022,619	+		PFLU_RS13380	0.66	+0.1
3,022,619	+		PFLU_RS13380	0.66	-2.2
3,022,619	+		PFLU_RS13380	0.66	-0.2
3,022,619	+		PFLU_RS13380	0.66	-0.9
3,022,620	-		PFLU_RS13380	0.66	-1.2
3,022,620	-		PFLU_RS13380	0.66	+0.5
3,022,620	-		PFLU_RS13380	0.66	-0.3
3,022,620	-		PFLU_RS13380	0.66	-0.7
3,022,620	-		PFLU_RS13380	0.66	-1.6
3,022,620	-		PFLU_RS13380	0.66	+2.4
3,022,620	-		PFLU_RS13380	0.66	+1.2
3,022,620	-		PFLU_RS13380	0.66	-0.4
3,022,628	+		PFLU_RS13380	0.66	+1.1
3,022,629	-		PFLU_RS13380	0.67	+1.1
3,022,629	-		PFLU_RS13380	0.67	-2.7
3,022,629	-		PFLU_RS13380	0.67	+1.3