Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS12900

Experiment: p-Coumaric (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) 5 mM
2,911,457	-		PFLU_RS12895	0.49	+1.4
2,911,545	+		PFLU_RS12895	0.54	+1.4
2,911,546	-		PFLU_RS12895	0.54	+2.1
2,911,546	-		PFLU_RS12895	0.54	-0.5
2,911,546	-		PFLU_RS12895	0.54	+2.1
2,911,546	-		PFLU_RS12895	0.54	-0.6
2,911,546	-		PFLU_RS12895	0.54	+1.3
2,911,585	-		PFLU_RS12895	0.56	+0.1
2,911,635	+		PFLU_RS12895	0.58	+2.1
2,911,638	+		PFLU_RS12895	0.59	+0.1
2,911,638	+		PFLU_RS12895	0.59	+1.0
2,911,638	+		PFLU_RS12895	0.59	+0.5
2,911,639	-		PFLU_RS12895	0.59	+0.5
2,911,639	-		PFLU_RS12895	0.59	-0.7
2,911,639	-		PFLU_RS12895	0.59	-2.1
2,911,639	-		PFLU_RS12895	0.59	-1.6
2,911,639	-		PFLU_RS12895	0.59	+1.1
2,911,639	-		PFLU_RS12895	0.59	+0.8
2,911,720	-		PFLU_RS12895	0.63	+1.1
2,911,720	-		PFLU_RS12895	0.63	-0.2
2,911,758	+		PFLU_RS12895	0.65	+0.3
2,911,758	+		PFLU_RS12895	0.65	-0.3
2,911,758	+		PFLU_RS12895	0.65	-1.0
2,911,758	+		PFLU_RS12895	0.65	+1.1
2,911,759	-		PFLU_RS12895	0.65	-1.5
2,911,759	-		PFLU_RS12895	0.65	+0.1
2,911,759	-		PFLU_RS12895	0.65	-1.1
2,911,759	-		PFLU_RS12895	0.65	+0.7
2,911,759	-		PFLU_RS12895	0.65	-1.8
2,911,833	-		PFLU_RS12895	0.69	+1.3
2,911,941	+		PFLU_RS12895	0.75	+0.5
2,911,941	+		PFLU_RS12895	0.75	+1.6
2,911,941	+		PFLU_RS12895	0.75	-0.5
2,911,942	-		PFLU_RS12895	0.75	+1.2
2,911,942	-		PFLU_RS12895	0.75	-0.2
2,911,942	-		PFLU_RS12895	0.75	+1.0
2,911,942	-		PFLU_RS12895	0.75	-0.7
2,911,942	-		PFLU_RS12895	0.75	-1.8
2,911,942	-		PFLU_RS12895	0.75	+0.2
2,911,942	-		PFLU_RS12895	0.75	-2.1
2,911,942	-		PFLU_RS12895	0.75	+0.8
2,911,942	-		PFLU_RS12895	0.75	-0.0
2,911,942	-		PFLU_RS12895	0.75	+1.1
2,911,942	-		PFLU_RS12895	0.75	+1.8
2,911,942	-		PFLU_RS12895	0.75	+0.0
2,911,942	-		PFLU_RS12895	0.75	+2.1
2,911,942	-		PFLU_RS12895	0.75	-1.7
2,911,942	-		PFLU_RS12895	0.75	+0.1
2,911,951	-		PFLU_RS12895	0.76	-0.2
2,912,049	+		PFLU_RS12895	0.81	+0.8
2,912,049	+		PFLU_RS12895	0.81	-2.6
2,912,050	-		PFLU_RS12895	0.81	-2.7
2,912,151	+		PFLU_RS12895	0.87	+2.4
2,912,151	+		PFLU_RS12895	0.87	+1.6
2,912,151	+		PFLU_RS12895	0.87	-1.4
2,912,151	+		PFLU_RS12895	0.87	-1.7
2,912,151	+		PFLU_RS12895	0.87	+0.7
2,912,151	+		PFLU_RS12895	0.87	+0.8
2,912,151	+		PFLU_RS12895	0.87	+1.0
2,912,151	+		PFLU_RS12895	0.87	-0.2
2,912,152	-		PFLU_RS12895	0.87	+2.5
2,912,152	-		PFLU_RS12895	0.87	-0.7
2,912,152	-		PFLU_RS12895	0.87	-0.9
2,912,193	+		PFLU_RS12895	0.89	-1.2
2,912,193	+		PFLU_RS12895	0.89	+2.1
2,912,194	-		PFLU_RS12895	0.89	-0.2
2,912,194	-		PFLU_RS12895	0.89	+2.9
2,912,268	+				+2.3
2,912,268	+				+0.5
2,912,269	-				-0.7
2,912,269	-				+2.5
2,912,295	+				-0.8
2,912,296	-				+1.4
2,912,313	+				+1.5
2,912,313	+				+1.9
2,912,313	+				+0.7
2,912,314	-				-0.5
2,912,391	+				+3.2
2,912,391	+				+0.5
2,912,391	+				-0.5
2,912,391	+				-0.6
2,912,391	+				+3.2
2,912,391	+				+0.8
2,912,391	+				+2.5
2,912,391	+				-0.7
2,912,391	+				-0.1
2,912,391	+				-0.5
2,912,391	+				+1.5
2,912,391	+				-0.2
2,912,392	-				+2.4
2,912,392	-				+0.2
2,912,392	-				+4.8
2,912,392	-				-0.7
2,912,392	-				+1.1
2,912,392	-				+0.2
2,912,498	+				-1.4
2,912,498	+				+0.9
2,912,498	+				+0.5
2,912,498	+				-0.1
2,912,498	+				+0.0
2,912,498	+				+1.2
2,912,499	-				+1.6
2,912,499	-				-1.6
2,912,499	-				-1.5
2,912,499	-				-0.2
2,912,499	-				+0.8
2,912,499	-				+1.3
2,912,499	-				-1.1
2,912,499	-				+0.8
2,912,499	-				+0.1
2,912,499	-				+0.5
2,912,499	-				-0.0
2,912,499	-				+0.8
2,912,499	-				-0.4
2,912,499	-				-1.5
2,912,499	-				+0.6
2,912,499	-				-1.6
2,912,499	-				+1.9
2,912,525	+				-0.3
2,912,525	+				+1.4
2,912,525	+				-0.9
2,912,525	+				-0.8
2,912,525	+				-0.4
2,912,525	+				-0.9
2,912,525	+				-1.8
2,912,526	-				-0.5
2,912,526	-				+0.5
2,912,526	-				+0.7
2,912,645	+		PFLU_RS12900	0.14	+1.1
2,912,645	+		PFLU_RS12900	0.14	+0.7
2,912,645	+		PFLU_RS12900	0.14	-0.6
2,912,645	+		PFLU_RS12900	0.14	-0.2
2,912,645	+		PFLU_RS12900	0.14	+0.5
2,912,645	+		PFLU_RS12900	0.14	+0.8
2,912,645	+		PFLU_RS12900	0.14	+2.4
2,912,646	-		PFLU_RS12900	0.14	-0.0
2,912,646	-		PFLU_RS12900	0.14	+0.4
2,912,646	-		PFLU_RS12900	0.14	-0.7
2,912,646	-		PFLU_RS12900	0.14	-1.8
2,912,646	-		PFLU_RS12900	0.14	+2.1
2,912,646	-		PFLU_RS12900	0.14	+2.4
2,912,687	+		PFLU_RS12900	0.16	-0.4
2,912,688	-		PFLU_RS12900	0.16	+2.0
2,912,688	-		PFLU_RS12900	0.16	+0.6
2,912,775	-		PFLU_RS12900	0.21	+0.8
2,912,837	+		PFLU_RS12900	0.24	+0.4
2,912,838	-		PFLU_RS12900	0.24	+0.4
2,912,838	-		PFLU_RS12900	0.24	+1.8
2,913,122	+		PFLU_RS12900	0.40	+1.8
2,913,122	+		PFLU_RS12900	0.40	+2.9
2,913,123	-		PFLU_RS12900	0.40	-1.6
2,913,125	+		PFLU_RS12900	0.40	+1.0
2,913,125	+		PFLU_RS12900	0.40	+0.2
2,913,125	+		PFLU_RS12900	0.40	-1.8
2,913,126	-		PFLU_RS12900	0.40	+0.9
2,913,126	-		PFLU_RS12900	0.40	+0.5
2,913,126	-		PFLU_RS12900	0.40	-0.4
2,913,141	+		PFLU_RS12900	0.41	-1.4
2,913,141	+		PFLU_RS12900	0.41	-0.1
2,913,142	-		PFLU_RS12900	0.41	-3.0
2,913,142	-		PFLU_RS12900	0.41	+0.9
2,913,143	+		PFLU_RS12900	0.41	+1.6
2,913,143	+		PFLU_RS12900	0.41	+0.1
2,913,329	+		PFLU_RS12900	0.51	-0.2
2,913,329	+		PFLU_RS12900	0.51	-0.4
2,913,330	-		PFLU_RS12900	0.51	-1.1
2,913,364	-		PFLU_RS12900	0.53	-0.9
2,913,365	+		PFLU_RS12900	0.53	-0.6
2,913,365	+		PFLU_RS12900	0.53	-2.2
2,913,365	+		PFLU_RS12900	0.53	+0.3
2,913,365	+		PFLU_RS12900	0.53	+1.1
2,913,365	+		PFLU_RS12900	0.53	-2.2
2,913,365	+		PFLU_RS12900	0.53	+0.1
2,913,365	+		PFLU_RS12900	0.53	+0.1
2,913,365	+		PFLU_RS12900	0.53	+1.0
2,913,365	+		PFLU_RS12900	0.53	-2.6
2,913,365	+		PFLU_RS12900	0.53	-1.8
2,913,365	+		PFLU_RS12900	0.53	+2.5
2,913,365	+		PFLU_RS12900	0.53	+2.6
2,913,365	+		PFLU_RS12900	0.53	+0.1
2,913,365	+		PFLU_RS12900	0.53	-1.5
2,913,365	+		PFLU_RS12900	0.53	-0.9
2,913,365	+		PFLU_RS12900	0.53	+2.1
2,913,365	+		PFLU_RS12900	0.53	+0.1
2,913,365	+		PFLU_RS12900	0.53	-0.7
2,913,365	+		PFLU_RS12900	0.53	-2.5
2,913,365	+		PFLU_RS12900	0.53	+3.7
2,913,365	+		PFLU_RS12900	0.53	-0.1
2,913,365	+		PFLU_RS12900	0.53	-0.2
2,913,365	+		PFLU_RS12900	0.53	+0.6
2,913,365	+		PFLU_RS12900	0.53	-0.2
2,913,365	+		PFLU_RS12900	0.53	+0.5
2,913,365	+		PFLU_RS12900	0.53	+4.2
2,913,365	+		PFLU_RS12900	0.53	-0.5
2,913,365	+		PFLU_RS12900	0.53	-1.2
2,913,365	+		PFLU_RS12900	0.53	+0.3
2,913,365	+		PFLU_RS12900	0.53	+1.1
2,913,365	+		PFLU_RS12900	0.53	-0.7
2,913,365	+		PFLU_RS12900	0.53	-0.6
2,913,366	-		PFLU_RS12900	0.53	-0.9
2,913,366	-		PFLU_RS12900	0.53	-1.7
2,913,366	-		PFLU_RS12900	0.53	+2.7
2,913,366	-		PFLU_RS12900	0.53	-0.7
2,913,366	-		PFLU_RS12900	0.53	+2.5
2,913,366	-		PFLU_RS12900	0.53	-2.2
2,913,366	-		PFLU_RS12900	0.53	-1.4
2,913,366	-		PFLU_RS12900	0.53	+0.5
2,913,366	-		PFLU_RS12900	0.53	+1.3
2,913,366	-		PFLU_RS12900	0.53	+1.1
2,913,366	-		PFLU_RS12900	0.53	-1.4
2,913,366	-		PFLU_RS12900	0.53	-1.5
2,913,366	-		PFLU_RS12900	0.53	+0.7
2,913,366	-		PFLU_RS12900	0.53	+1.1
2,913,366	-		PFLU_RS12900	0.53	-0.4
2,913,366	-		PFLU_RS12900	0.53	+0.6
2,913,366	-		PFLU_RS12900	0.53	+2.1
2,913,366	-		PFLU_RS12900	0.53	-1.4
2,913,366	-		PFLU_RS12900	0.53	-1.2
2,913,366	-		PFLU_RS12900	0.53	+0.5
2,913,366	-		PFLU_RS12900	0.53	-0.9
2,913,366	-		PFLU_RS12900	0.53	-1.7
2,913,366	-		PFLU_RS12900	0.53	+1.2
2,913,366	-		PFLU_RS12900	0.53	-0.9
2,913,366	-		PFLU_RS12900	0.53	+0.5
2,913,366	-		PFLU_RS12900	0.53	+1.1
2,913,366	-		PFLU_RS12900	0.53	+1.3
2,913,366	-		PFLU_RS12900	0.53	-0.9
2,913,366	-		PFLU_RS12900	0.53	-0.1
2,913,366	-		PFLU_RS12900	0.53	-0.4
2,913,366	-		PFLU_RS12900	0.53	+2.2
2,913,369	+		PFLU_RS12900	0.53	+0.4
2,913,370	-		PFLU_RS12900	0.53	-1.7
2,913,370	-		PFLU_RS12900	0.53	-0.7
2,913,370	-		PFLU_RS12900	0.53	+0.5
2,913,419	+		PFLU_RS12900	0.56	-1.7
2,913,443	+		PFLU_RS12900	0.57	-1.5
2,913,443	+		PFLU_RS12900	0.57	-0.7
2,913,443	+		PFLU_RS12900	0.57	-0.4
2,913,443	+		PFLU_RS12900	0.57	-1.6
2,913,443	+		PFLU_RS12900	0.57	+0.4
2,913,443	+		PFLU_RS12900	0.57	-0.5
2,913,444	-		PFLU_RS12900	0.57	-0.7
2,913,444	-		PFLU_RS12900	0.57	-1.5
2,913,444	-		PFLU_RS12900	0.57	-1.1
2,913,444	-		PFLU_RS12900	0.57	-1.4
2,913,444	-		PFLU_RS12900	0.57	+1.5
2,913,444	-		PFLU_RS12900	0.57	-1.7
2,913,444	-		PFLU_RS12900	0.57	-0.2
2,913,444	-		PFLU_RS12900	0.57	-1.2
2,913,444	-		PFLU_RS12900	0.57	+3.9
2,913,447	+		PFLU_RS12900	0.57	-0.7
2,913,448	-		PFLU_RS12900	0.58	-1.8
2,913,448	-		PFLU_RS12900	0.58	-1.0
2,913,449	+		PFLU_RS12900	0.58	-0.7
2,913,449	+		PFLU_RS12900	0.58	+2.4
2,913,449	+		PFLU_RS12900	0.58	-1.2
2,913,449	+		PFLU_RS12900	0.58	-0.2
2,913,450	-		PFLU_RS12900	0.58	-1.6
2,913,450	-		PFLU_RS12900	0.58	+0.2
2,913,450	-		PFLU_RS12900	0.58	+1.0
2,913,450	-		PFLU_RS12900	0.58	+2.1
2,913,450	-		PFLU_RS12900	0.58	-0.6
2,913,485	+		PFLU_RS12900	0.60	+0.1
2,913,485	+		PFLU_RS12900	0.60	+0.7
2,913,485	+		PFLU_RS12900	0.60	-0.5
2,913,485	+		PFLU_RS12900	0.60	-0.2
2,913,486	-		PFLU_RS12900	0.60	+0.7
2,913,486	-		PFLU_RS12900	0.60	+0.2
2,913,486	-		PFLU_RS12900	0.60	+0.4
2,913,537	+		PFLU_RS12900	0.62	-0.1
2,913,537	+		PFLU_RS12900	0.62	+2.4
2,913,602	+		PFLU_RS12900	0.66	-0.0
2,913,603	-		PFLU_RS12900	0.66	-2.9
2,913,603	-		PFLU_RS12900	0.66	+0.1
2,913,616	+		PFLU_RS12900	0.67	+0.3
2,913,863	+		PFLU_RS12900	0.80	-0.4
2,913,863	+		PFLU_RS12900	0.80	+1.5
2,913,868	+		PFLU_RS12900	0.80	-0.6
2,913,868	+		PFLU_RS12900	0.80	-0.5
2,913,869	-		PFLU_RS12900	0.81	+0.1
2,913,890	+		PFLU_RS12900	0.82	-0.2
2,913,891	-		PFLU_RS12900	0.82	+1.5
2,913,923	+		PFLU_RS12900	0.83	-1.8
2,913,924	-		PFLU_RS12900	0.84	-1.6
2,914,017	+		PFLU_RS12900	0.89	-1.1
2,914,017	+		PFLU_RS12900	0.89	-0.4
2,914,017	+		PFLU_RS12900	0.89	+1.0
2,914,017	+		PFLU_RS12900	0.89	-0.9
2,914,017	+		PFLU_RS12900	0.89	-1.7
2,914,018	-		PFLU_RS12900	0.89	-2.3
2,914,018	-		PFLU_RS12900	0.89	+0.5
2,914,018	-		PFLU_RS12900	0.89	-2.4
2,914,019	+		PFLU_RS12900	0.89	+0.8
2,914,020	-		PFLU_RS12900	0.89	-2.2
2,914,143	+				+0.1
2,914,143	+				-2.0
2,914,143	+				+0.8
2,914,143	+				-0.1
2,914,143	+				+0.8
2,914,143	+				-0.6
2,914,143	+				-1.4
2,914,143	+				-0.2
2,914,143	+				-0.2
2,914,143	+				+1.0
2,914,143	+				+0.5
2,914,143	+				+1.3
2,914,143	+				+0.8
2,914,143	+				+2.0
2,914,143	+				+1.6
2,914,144	-				+0.7
2,914,144	-				+0.8
2,914,144	-				-0.5
2,914,144	-				-1.0
2,914,144	-				+1.6
2,914,144	-				+0.7
2,914,144	-				+0.7
2,914,146	-				+1.4
2,914,146	-				-1.2
2,914,198	+				+0.5
2,914,198	+				+0.1
2,914,198	+				-0.7
2,914,198	+				-0.6
2,914,198	+				-0.9
2,914,198	+				+2.6
2,914,199	-				+2.7
2,914,199	-				-0.8
2,914,199	-				+0.5
2,914,199	-				+1.3
2,914,199	-				+0.8
2,914,199	-				-1.2
2,914,199	-				+2.1
2,914,199	-				-2.3
2,914,199	-				-1.0
2,914,199	-				+1.0
2,914,199	-				+1.2
2,914,199	-				+1.9
2,914,201	+				-0.2
2,914,201	+				+0.1
2,914,201	+				+0.3
2,914,201	+				-0.4
2,914,201	+				+0.9
2,914,201	+				-0.2
2,914,201	+				+0.6
2,914,201	+				-2.9
2,914,202	-				+1.1
2,914,202	-				-0.5
2,914,202	-				+0.1
2,914,202	-				+1.1
2,914,202	-				-0.1
2,914,204	+				+0.9
2,914,204	+				+0.5
2,914,204	+				-0.9
2,914,204	+				-0.6
2,914,204	+				-1.1
2,914,204	+				-2.2
2,914,205	-				-1.1
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2,914,205	-				+0.8
2,914,205	-				+0.3
2,914,205	-				-0.2
2,914,205	-				+1.0
2,914,205	-				+0.6
2,914,266	-				+2.0
2,914,266	-				+1.6
2,914,266	-				+0.9
2,914,270	+				+0.7
2,914,270	+				-2.0
2,914,270	+				-0.4
2,914,270	+				-1.5
2,914,270	+				+2.5
2,914,270	+				+2.6
2,914,271	-				-0.2
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2,914,271	-				-2.2
2,914,271	-				-0.6
2,914,271	-				+1.3
2,914,271	-				+0.4
2,914,319	+				-2.5
2,914,319	+				+0.3
2,914,319	+				+0.9
2,914,319	+				+0.6
2,914,320	-				-2.9
2,914,420	-				-0.2
2,914,420	-				-1.7
2,914,505	+				+0.3
2,914,505	+				+2.3
2,914,505	+				+0.8
2,914,505	+				+0.9
2,914,505	+				+1.0
2,914,505	+				+0.2
2,914,506	-				-0.7
2,914,506	-				+0.1
2,914,506	-				-0.4
2,914,506	-				-1.8
2,914,506	-				-0.2
2,914,542	+				+2.2
2,914,542	+				+0.1
2,914,543	-				-0.9
2,914,543	-				-2.1
2,914,579	+				+0.3
2,914,653	+				-0.7
2,914,653	+				-1.9
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2,914,654	-				-2.9
2,914,654	-				-2.9
2,914,654	-				+0.0
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2,914,680	+				-2.5
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2,914,857	+		PFLU_RS12905	0.22	+1.2
2,914,857	+		PFLU_RS12905	0.22	-0.4
2,914,857	+		PFLU_RS12905	0.22	-0.5
2,914,857	+		PFLU_RS12905	0.22	-1.6
2,914,857	+		PFLU_RS12905	0.22	-1.6
2,914,857	+		PFLU_RS12905	0.22	-1.2
2,914,858	-		PFLU_RS12905	0.22	-1.9
2,914,858	-		PFLU_RS12905	0.22	-0.2
2,914,858	-		PFLU_RS12905	0.22	+0.8
2,914,858	-		PFLU_RS12905	0.22	-1.9
2,914,858	-		PFLU_RS12905	0.22	-2.3
2,914,858	-		PFLU_RS12905	0.22	-2.1
2,915,133	+		PFLU_RS12905	0.42	-0.4
2,915,169	+		PFLU_RS12905	0.44	+0.1
2,915,169	+		PFLU_RS12905	0.44	-0.2
2,915,220	+		PFLU_RS12905	0.48	-1.2
2,915,220	+		PFLU_RS12905	0.48	+0.4
2,915,220	+		PFLU_RS12905	0.48	-1.7
2,915,220	+		PFLU_RS12905	0.48	-0.8
2,915,220	+		PFLU_RS12905	0.48	+1.4
2,915,220	+		PFLU_RS12905	0.48	-1.7
2,915,220	+		PFLU_RS12905	0.48	-0.4
2,915,220	+		PFLU_RS12905	0.48	-1.1
2,915,220	+		PFLU_RS12905	0.48	+0.1
2,915,220	+		PFLU_RS12905	0.48	-0.2
2,915,220	+		PFLU_RS12905	0.48	-1.9
2,915,221	-		PFLU_RS12905	0.48	-2.0
2,915,221	-		PFLU_RS12905	0.48	-0.5
2,915,221	-		PFLU_RS12905	0.48	-0.7
2,915,221	-		PFLU_RS12905	0.48	+0.8
2,915,221	-		PFLU_RS12905	0.48	+0.7
2,915,221	-		PFLU_RS12905	0.48	-0.7
2,915,221	-		PFLU_RS12905	0.48	-1.8
2,915,221	-		PFLU_RS12905	0.48	-0.7