Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS10925

Experiment: p-Coumaric (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) 5 mM
2,409,385	+		PFLU_RS10920	0.22	+2.7
2,409,385	+		PFLU_RS10920	0.22	+0.7
2,409,385	+		PFLU_RS10920	0.22	+3.5
2,409,386	-		PFLU_RS10920	0.22	+0.4
2,409,386	-		PFLU_RS10920	0.22	-1.2
2,409,386	-		PFLU_RS10920	0.22	-1.8
2,409,387	+		PFLU_RS10920	0.22	+0.4
2,409,387	+		PFLU_RS10920	0.22	+1.9
2,409,387	+		PFLU_RS10920	0.22	+0.3
2,409,387	+		PFLU_RS10920	0.22	+1.1
2,409,387	+		PFLU_RS10920	0.22	+0.7
2,409,387	+		PFLU_RS10920	0.22	+0.6
2,409,387	+		PFLU_RS10920	0.22	-1.0
2,409,387	+		PFLU_RS10920	0.22	-0.6
2,409,387	+		PFLU_RS10920	0.22	-0.9
2,409,387	+		PFLU_RS10920	0.22	-0.6
2,409,387	+		PFLU_RS10920	0.22	-1.9
2,409,388	-		PFLU_RS10920	0.22	-1.4
2,409,388	-		PFLU_RS10920	0.22	-0.8
2,409,388	-		PFLU_RS10920	0.22	-0.6
2,409,388	-		PFLU_RS10920	0.22	+0.4
2,409,388	-		PFLU_RS10920	0.22	+0.0
2,409,420	+		PFLU_RS10920	0.25	-1.2
2,409,420	+		PFLU_RS10920	0.25	+0.7
2,409,532	+		PFLU_RS10920	0.37	-0.1
2,409,532	+		PFLU_RS10920	0.37	+1.1
2,409,532	+		PFLU_RS10920	0.37	-1.4
2,409,532	+		PFLU_RS10920	0.37	-0.9
2,409,532	+		PFLU_RS10920	0.37	+0.1
2,409,533	-		PFLU_RS10920	0.37	+0.8
2,409,533	-		PFLU_RS10920	0.37	+0.2
2,409,533	-		PFLU_RS10920	0.37	-0.6
2,409,533	-		PFLU_RS10920	0.37	-0.2
2,409,533	-		PFLU_RS10920	0.37	-0.4
2,409,533	-		PFLU_RS10920	0.37	-2.8
2,409,609	+		PFLU_RS10920	0.44	-2.2
2,409,610	-		PFLU_RS10920	0.45	+2.1
2,409,610	-		PFLU_RS10920	0.45	+2.1
2,409,783	+		PFLU_RS10920	0.62	+0.4
2,409,783	+		PFLU_RS10920	0.62	-0.9
2,409,783	+		PFLU_RS10920	0.62	-0.7
2,409,783	+		PFLU_RS10920	0.62	+1.1
2,409,783	+		PFLU_RS10920	0.62	-0.4
2,409,783	+		PFLU_RS10920	0.62	+1.3
2,409,783	+		PFLU_RS10920	0.62	-1.2
2,409,783	+		PFLU_RS10920	0.62	-1.8
2,409,784	-		PFLU_RS10920	0.62	-0.8
2,409,784	-		PFLU_RS10920	0.62	-0.9
2,409,784	-		PFLU_RS10920	0.62	-0.8
2,409,784	-		PFLU_RS10920	0.62	-1.3
2,409,784	-		PFLU_RS10920	0.62	-2.0
2,409,784	-		PFLU_RS10920	0.62	+2.6
2,409,784	-		PFLU_RS10920	0.62	+2.0
2,409,784	-		PFLU_RS10920	0.62	-1.8
2,409,831	+		PFLU_RS10920	0.67	-2.6
2,409,831	+		PFLU_RS10920	0.67	-0.4
2,409,831	+		PFLU_RS10920	0.67	+1.0
2,409,831	+		PFLU_RS10920	0.67	-0.7
2,409,832	-		PFLU_RS10920	0.67	-2.0
2,409,832	-		PFLU_RS10920	0.67	+1.0
2,409,832	-		PFLU_RS10920	0.67	-3.1
2,409,835	+		PFLU_RS10920	0.68	+0.1
2,409,835	+		PFLU_RS10920	0.68	+2.1
2,409,835	+		PFLU_RS10920	0.68	+1.0
2,409,835	+		PFLU_RS10920	0.68	-2.2
2,409,836	-		PFLU_RS10920	0.68	+2.0
2,409,861	+		PFLU_RS10920	0.70	-0.2
2,409,862	-		PFLU_RS10920	0.70	+0.3
2,409,879	+		PFLU_RS10920	0.72	-0.9
2,409,879	+		PFLU_RS10920	0.72	+0.0
2,409,880	-		PFLU_RS10920	0.72	+1.2
2,409,883	+		PFLU_RS10920	0.72	-1.8
2,409,883	+		PFLU_RS10920	0.72	+2.1
2,409,883	+		PFLU_RS10920	0.72	-0.6
2,409,883	+		PFLU_RS10920	0.72	-0.0
2,409,883	+		PFLU_RS10920	0.72	-0.4
2,409,883	+		PFLU_RS10920	0.72	+1.1
2,409,883	+		PFLU_RS10920	0.72	-1.6
2,409,883	+		PFLU_RS10920	0.72	-0.4
2,409,883	+		PFLU_RS10920	0.72	-1.1
2,409,883	+		PFLU_RS10920	0.72	+0.9
2,409,883	+		PFLU_RS10920	0.72	-0.5
2,409,883	+		PFLU_RS10920	0.72	+1.7
2,409,883	+		PFLU_RS10920	0.72	+0.5
2,409,884	-		PFLU_RS10920	0.73	-0.7
2,409,884	-		PFLU_RS10920	0.73	+0.6
2,409,884	-		PFLU_RS10920	0.73	+0.1
2,409,884	-		PFLU_RS10920	0.73	+0.8
2,409,884	-		PFLU_RS10920	0.73	+1.1
2,409,884	-		PFLU_RS10920	0.73	-1.7
2,409,884	-		PFLU_RS10920	0.73	+1.0
2,409,884	-		PFLU_RS10920	0.73	+0.3
2,409,884	-		PFLU_RS10920	0.73	+0.9
2,409,884	-		PFLU_RS10920	0.73	+0.7
2,409,884	-		PFLU_RS10920	0.73	-0.6
2,409,884	-		PFLU_RS10920	0.73	+0.6
2,409,884	-		PFLU_RS10920	0.73	+0.5
2,409,884	-		PFLU_RS10920	0.73	-0.2
2,409,884	-		PFLU_RS10920	0.73	-1.9
2,409,884	-		PFLU_RS10920	0.73	+1.1
2,409,884	-		PFLU_RS10920	0.73	-1.3
2,409,884	-		PFLU_RS10920	0.73	-1.9
2,409,884	-		PFLU_RS10920	0.73	+0.9
2,409,978	+		PFLU_RS10920	0.82	+1.1
2,409,978	+		PFLU_RS10920	0.82	+1.0
2,409,979	-		PFLU_RS10920	0.82	-2.6
2,409,979	-		PFLU_RS10920	0.82	-0.4
2,409,979	-		PFLU_RS10920	0.82	+0.0
2,410,008	+		PFLU_RS10920	0.85	+0.1
2,410,008	+		PFLU_RS10920	0.85	+1.6
2,410,008	+		PFLU_RS10920	0.85	-0.7
2,410,008	+		PFLU_RS10920	0.85	+1.8
2,410,008	+		PFLU_RS10920	0.85	-0.2
2,410,008	+		PFLU_RS10920	0.85	-1.2
2,410,008	+		PFLU_RS10920	0.85	-0.0
2,410,008	+		PFLU_RS10920	0.85	-0.8
2,410,009	-		PFLU_RS10920	0.85	-0.2
2,410,009	-		PFLU_RS10920	0.85	-0.9
2,410,009	-		PFLU_RS10920	0.85	+0.6
2,410,009	-		PFLU_RS10920	0.85	+0.1
2,410,009	-		PFLU_RS10920	0.85	+1.7
2,410,009	-		PFLU_RS10920	0.85	-0.4
2,410,127	+				-1.1
2,410,127	+				-0.7
2,410,127	+				-0.5
2,410,128	-				-1.2
2,410,171	+				+4.1
2,410,228	-				+0.3
2,410,256	-		PFLU_RS10925	0.13	+0.4
2,410,330	+		PFLU_RS10925	0.22	-1.1
2,410,330	+		PFLU_RS10925	0.22	-0.2
2,410,331	-		PFLU_RS10925	0.22	-1.4
2,410,331	-		PFLU_RS10925	0.22	-1.2
2,410,365	-		PFLU_RS10925	0.26	-2.2
2,410,518	+		PFLU_RS10925	0.44	+0.3
2,410,518	+		PFLU_RS10925	0.44	+0.8
2,410,518	+		PFLU_RS10925	0.44	+0.4
2,410,518	+		PFLU_RS10925	0.44	+0.6
2,410,518	+		PFLU_RS10925	0.44	-2.3
2,410,518	+		PFLU_RS10925	0.44	-0.2
2,410,518	+		PFLU_RS10925	0.44	-1.7
2,410,518	+		PFLU_RS10925	0.44	-0.7
2,410,518	+		PFLU_RS10925	0.44	-0.4
2,410,519	-		PFLU_RS10925	0.44	-0.3
2,410,519	-		PFLU_RS10925	0.44	-0.9
2,410,519	-		PFLU_RS10925	0.44	-1.3
2,410,519	-		PFLU_RS10925	0.44	-0.9
2,410,689	+		PFLU_RS10925	0.65	+1.4
2,410,689	+		PFLU_RS10925	0.65	+0.2
2,410,690	-		PFLU_RS10925	0.65	+1.2
2,410,832	+		PFLU_RS10925	0.82	+0.3
2,410,832	+		PFLU_RS10925	0.82	+2.1
2,410,832	+		PFLU_RS10925	0.82	+0.1
2,410,833	-		PFLU_RS10925	0.82	+0.1
2,410,833	-		PFLU_RS10925	0.82	-0.6
2,410,833	-		PFLU_RS10925	0.82	+1.6
2,410,974	+				+3.0
2,410,975	-				-1.4
2,410,975	-				-1.8
2,411,045	-				-3.1
2,411,081	+				+0.1
2,411,081	+				+0.6
2,411,081	+				-2.1
2,411,082	-				-0.7
2,411,082	-				-1.0
2,411,082	-				+1.2
2,411,082	-				-1.0
2,411,082	-				+1.1
2,411,082	-				+0.1
2,411,087	+				+0.1
2,411,087	+				-1.4
2,411,088	-				+2.1
2,411,145	-		PFLU_RS10930	0.10	-0.9
2,411,244	+		PFLU_RS10930	0.16	+1.7
2,411,244	+		PFLU_RS10930	0.16	-1.0
2,411,244	+		PFLU_RS10930	0.16	+1.1
2,411,244	+		PFLU_RS10930	0.16	-1.0
2,411,245	-		PFLU_RS10930	0.16	-0.2
2,411,246	+		PFLU_RS10930	0.16	+2.7
2,411,246	+		PFLU_RS10930	0.16	-0.6
2,411,246	+		PFLU_RS10930	0.16	+2.1
2,411,246	+		PFLU_RS10930	0.16	+0.3
2,411,246	+		PFLU_RS10930	0.16	-0.4
2,411,246	+		PFLU_RS10930	0.16	-2.3
2,411,246	+		PFLU_RS10930	0.16	+0.8
2,411,246	+		PFLU_RS10930	0.16	+2.6
2,411,246	+		PFLU_RS10930	0.16	+0.4
2,411,246	+		PFLU_RS10930	0.16	-1.6
2,411,246	+		PFLU_RS10930	0.16	-1.7
2,411,246	+		PFLU_RS10930	0.16	-1.5
2,411,246	+		PFLU_RS10930	0.16	+0.4
2,411,246	+		PFLU_RS10930	0.16	+0.1
2,411,246	+		PFLU_RS10930	0.16	-0.3
2,411,246	+		PFLU_RS10930	0.16	-1.7
2,411,246	+		PFLU_RS10930	0.16	-1.9
2,411,246	+		PFLU_RS10930	0.16	-0.5
2,411,246	+		PFLU_RS10930	0.16	+1.2
2,411,246	+		PFLU_RS10930	0.16	-0.5
2,411,246	+		PFLU_RS10930	0.16	+1.5
2,411,246	+		PFLU_RS10930	0.16	+0.1
2,411,246	+		PFLU_RS10930	0.16	+0.7
2,411,246	+		PFLU_RS10930	0.16	+2.1
2,411,246	+		PFLU_RS10930	0.16	+1.1
2,411,246	+		PFLU_RS10930	0.16	+1.2
2,411,246	+		PFLU_RS10930	0.16	-0.7
2,411,246	+		PFLU_RS10930	0.16	-1.6
2,411,246	+		PFLU_RS10930	0.16	+2.1
2,411,246	+		PFLU_RS10930	0.16	+0.1
2,411,246	+		PFLU_RS10930	0.16	-0.1
2,411,246	+		PFLU_RS10930	0.16	+1.6
2,411,247	-		PFLU_RS10930	0.17	+0.9
2,411,247	-		PFLU_RS10930	0.17	+1.7
2,411,247	-		PFLU_RS10930	0.17	+0.7
2,411,247	-		PFLU_RS10930	0.17	+0.6
2,411,247	-		PFLU_RS10930	0.17	-0.7
2,411,247	-		PFLU_RS10930	0.17	-1.0
2,411,247	-		PFLU_RS10930	0.17	+3.1
2,411,247	-		PFLU_RS10930	0.17	+2.4
2,411,247	-		PFLU_RS10930	0.17	-1.2
2,411,247	-		PFLU_RS10930	0.17	-1.6
2,411,247	-		PFLU_RS10930	0.17	-1.2
2,411,247	-		PFLU_RS10930	0.17	+3.9
2,411,247	-		PFLU_RS10930	0.17	-1.2
2,411,247	-		PFLU_RS10930	0.17	+2.1
2,411,247	-		PFLU_RS10930	0.17	-1.1
2,411,247	-		PFLU_RS10930	0.17	+1.6
2,411,247	-		PFLU_RS10930	0.17	+2.5
2,411,247	-		PFLU_RS10930	0.17	-2.8
2,411,247	-		PFLU_RS10930	0.17	+1.9
2,411,247	-		PFLU_RS10930	0.17	+1.9
2,411,247	-		PFLU_RS10930	0.17	-0.8
2,411,247	-		PFLU_RS10930	0.17	-0.2
2,411,247	-		PFLU_RS10930	0.17	-0.3
2,411,247	-		PFLU_RS10930	0.17	-0.6
2,411,247	-		PFLU_RS10930	0.17	+1.1
2,411,247	-		PFLU_RS10930	0.17	-0.1
2,411,247	-		PFLU_RS10930	0.17	+0.3
2,411,247	-		PFLU_RS10930	0.17	+2.1
2,411,247	-		PFLU_RS10930	0.17	+0.1
2,411,383	+		PFLU_RS10930	0.25	-1.5
2,411,383	+		PFLU_RS10930	0.25	-1.4
2,411,384	-		PFLU_RS10930	0.25	-1.4
2,411,384	-		PFLU_RS10930	0.25	-0.0
2,411,384	-		PFLU_RS10930	0.25	-0.6
2,411,384	-		PFLU_RS10930	0.25	+0.7
2,411,580	+		PFLU_RS10930	0.37	+1.8
2,411,697	-		PFLU_RS10930	0.44	+1.6
2,411,719	+		PFLU_RS10930	0.45	+1.7
2,411,720	-		PFLU_RS10930	0.45	-0.2
2,411,721	+		PFLU_RS10930	0.45	+2.8
2,411,814	+		PFLU_RS10930	0.51	-0.2
2,411,815	-		PFLU_RS10930	0.51	+1.5
2,411,969	+		PFLU_RS10930	0.60	-1.6
2,411,969	+		PFLU_RS10930	0.60	-0.9
2,411,969	+		PFLU_RS10930	0.60	+3.7
2,411,969	+		PFLU_RS10930	0.60	+1.7
2,411,970	-		PFLU_RS10930	0.60	-1.6
2,411,970	-		PFLU_RS10930	0.60	+0.3