Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS10915

Experiment: p-Coumaric (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) 5 mM
2,406,603	+		PFLU_RS10910	0.50	-0.9
2,406,603	+		PFLU_RS10910	0.50	+1.1
2,406,604	-		PFLU_RS10910	0.50	+0.8
2,406,604	-		PFLU_RS10910	0.50	+0.8
2,406,604	-		PFLU_RS10910	0.50	-2.1
2,406,604	-		PFLU_RS10910	0.50	-0.3
2,406,604	-		PFLU_RS10910	0.50	+0.1
2,406,653	+		PFLU_RS10910	0.53	-0.7
2,406,671	-		PFLU_RS10910	0.55	+0.4
2,406,790	-		PFLU_RS10910	0.64	+2.1
2,406,848	+		PFLU_RS10910	0.68	+0.0
2,406,921	-		PFLU_RS10910	0.73	-2.2
2,406,921	-		PFLU_RS10910	0.73	+0.3
2,407,011	+		PFLU_RS10910	0.80	-0.4
2,407,012	-		PFLU_RS10910	0.80	+2.1
2,407,012	-		PFLU_RS10910	0.80	+1.1
2,407,057	-		PFLU_RS10910	0.84	+1.1
2,407,057	-		PFLU_RS10910	0.84	-1.9
2,407,202	+				+1.9
2,407,203	-				+0.8
2,407,203	-				+0.4
2,407,264	-				-1.6
2,407,276	+				+2.0
2,407,277	-				+0.6
2,407,568	+				+0.1
2,407,569	-				+1.6
2,407,570	+				-2.1
2,407,570	+				-0.9
2,407,570	+				-1.3
2,407,739	+				+0.3
2,407,740	-				-1.3
2,407,762	+		PFLU_RS10915	0.11	+0.6
2,407,762	+		PFLU_RS10915	0.11	+2.6
2,407,763	-		PFLU_RS10915	0.11	+0.7
2,407,845	+		PFLU_RS10915	0.16	-0.7
2,407,845	+		PFLU_RS10915	0.16	+0.3
2,407,846	-		PFLU_RS10915	0.16	+1.0
2,407,867	+		PFLU_RS10915	0.17	-1.3
2,407,867	+		PFLU_RS10915	0.17	-1.6
2,407,867	+		PFLU_RS10915	0.17	+1.2
2,407,867	+		PFLU_RS10915	0.17	-1.0
2,407,867	+		PFLU_RS10915	0.17	-2.3
2,407,867	+		PFLU_RS10915	0.17	+1.8
2,407,867	+		PFLU_RS10915	0.17	+0.8
2,407,867	+		PFLU_RS10915	0.17	+1.3
2,407,867	+		PFLU_RS10915	0.17	+0.6
2,407,868	-		PFLU_RS10915	0.17	+0.3
2,407,868	-		PFLU_RS10915	0.17	-2.2
2,407,868	-		PFLU_RS10915	0.17	-1.0
2,407,869	+		PFLU_RS10915	0.17	-2.1
2,407,869	+		PFLU_RS10915	0.17	-0.7
2,407,869	+		PFLU_RS10915	0.17	+4.1
2,407,869	+		PFLU_RS10915	0.17	-1.3
2,407,869	+		PFLU_RS10915	0.17	+0.1
2,407,869	+		PFLU_RS10915	0.17	+1.2
2,407,869	+		PFLU_RS10915	0.17	-1.0
2,407,870	-		PFLU_RS10915	0.17	+0.0
2,407,870	-		PFLU_RS10915	0.17	+0.3
2,407,955	-		PFLU_RS10915	0.23	+1.1
2,407,997	-		PFLU_RS10915	0.25	+1.9
2,408,022	+		PFLU_RS10915	0.27	+0.1
2,408,023	-		PFLU_RS10915	0.27	-1.2
2,408,023	-		PFLU_RS10915	0.27	+0.0
2,408,116	+		PFLU_RS10915	0.33	+0.4
2,408,146	+		PFLU_RS10915	0.35	+1.0
2,408,146	+		PFLU_RS10915	0.35	-0.7
2,408,146	+		PFLU_RS10915	0.35	+0.3
2,408,153	+		PFLU_RS10915	0.35	+0.3
2,408,153	+		PFLU_RS10915	0.35	-2.2
2,408,206	+		PFLU_RS10915	0.39	-1.9
2,408,207	-		PFLU_RS10915	0.39	-1.0
2,408,207	-		PFLU_RS10915	0.39	-1.2
2,408,207	-		PFLU_RS10915	0.39	+3.1
2,408,207	-		PFLU_RS10915	0.39	+0.9
2,408,207	-		PFLU_RS10915	0.39	+0.3
2,408,233	+		PFLU_RS10915	0.40	-0.9
2,408,233	+		PFLU_RS10915	0.40	+1.8
2,408,234	-		PFLU_RS10915	0.40	+0.9
2,408,356	+		PFLU_RS10915	0.48	-0.9
2,408,422	+		PFLU_RS10915	0.52	-0.7
2,408,423	-		PFLU_RS10915	0.52	+0.4
2,408,423	-		PFLU_RS10915	0.52	+0.1
2,408,529	+		PFLU_RS10915	0.59	+0.1
2,408,587	+		PFLU_RS10915	0.63	+0.1
2,408,588	-		PFLU_RS10915	0.63	-1.0
2,408,611	+		PFLU_RS10915	0.64	+3.1
2,408,612	-		PFLU_RS10915	0.64	+3.1
2,408,617	+		PFLU_RS10915	0.65	+2.1
2,408,617	+		PFLU_RS10915	0.65	-0.8
2,408,617	+		PFLU_RS10915	0.65	+0.1
2,408,617	+		PFLU_RS10915	0.65	+3.4
2,408,617	+		PFLU_RS10915	0.65	+0.7
2,408,837	-		PFLU_RS10915	0.78	-0.2
2,408,844	+		PFLU_RS10915	0.79	+1.1
2,408,881	+		PFLU_RS10915	0.81	+2.8
2,408,882	-		PFLU_RS10915	0.81	-0.4
2,408,882	-		PFLU_RS10915	0.81	+1.4
2,408,899	+		PFLU_RS10915	0.82	-2.8
2,408,899	+		PFLU_RS10915	0.82	+2.1
2,408,899	+		PFLU_RS10915	0.82	-0.7
2,408,899	+		PFLU_RS10915	0.82	-1.0
2,408,899	+		PFLU_RS10915	0.82	-2.5
2,408,899	+		PFLU_RS10915	0.82	+0.3
2,408,899	+		PFLU_RS10915	0.82	-0.3
2,408,900	-		PFLU_RS10915	0.82	-0.1
2,408,900	-		PFLU_RS10915	0.82	-1.7
2,408,900	-		PFLU_RS10915	0.82	-0.5
2,408,903	+		PFLU_RS10915	0.83	+1.1
2,408,903	+		PFLU_RS10915	0.83	-0.9
2,408,903	+		PFLU_RS10915	0.83	-1.1
2,408,904	-		PFLU_RS10915	0.83	+1.1
2,408,904	-		PFLU_RS10915	0.83	-1.6
2,408,904	-		PFLU_RS10915	0.83	+0.2
2,408,904	-		PFLU_RS10915	0.83	+0.9
2,409,013	+		PFLU_RS10915	0.90	+1.0
2,409,013	+		PFLU_RS10915	0.90	+2.7
2,409,014	-		PFLU_RS10915	0.90	-2.5
2,409,014	-		PFLU_RS10915	0.90	+0.9
2,409,014	-		PFLU_RS10915	0.90	-0.7
2,409,014	-		PFLU_RS10915	0.90	+2.7
2,409,133	-				-1.0
2,409,142	+				+0.9
2,409,385	+		PFLU_RS10920	0.22	+2.7
2,409,385	+		PFLU_RS10920	0.22	+0.7
2,409,385	+		PFLU_RS10920	0.22	+3.5
2,409,386	-		PFLU_RS10920	0.22	+0.4
2,409,386	-		PFLU_RS10920	0.22	-1.2
2,409,386	-		PFLU_RS10920	0.22	-1.8
2,409,387	+		PFLU_RS10920	0.22	+0.4
2,409,387	+		PFLU_RS10920	0.22	+1.9
2,409,387	+		PFLU_RS10920	0.22	+0.3
2,409,387	+		PFLU_RS10920	0.22	+1.1
2,409,387	+		PFLU_RS10920	0.22	+0.7
2,409,387	+		PFLU_RS10920	0.22	+0.6
2,409,387	+		PFLU_RS10920	0.22	-1.0
2,409,387	+		PFLU_RS10920	0.22	-0.6
2,409,387	+		PFLU_RS10920	0.22	-0.9
2,409,387	+		PFLU_RS10920	0.22	-0.6
2,409,387	+		PFLU_RS10920	0.22	-1.9
2,409,388	-		PFLU_RS10920	0.22	-1.4
2,409,388	-		PFLU_RS10920	0.22	-0.8
2,409,388	-		PFLU_RS10920	0.22	-0.6
2,409,388	-		PFLU_RS10920	0.22	+0.4
2,409,388	-		PFLU_RS10920	0.22	+0.0
2,409,420	+		PFLU_RS10920	0.25	-1.2
2,409,420	+		PFLU_RS10920	0.25	+0.7
2,409,532	+		PFLU_RS10920	0.37	-0.1
2,409,532	+		PFLU_RS10920	0.37	+1.1
2,409,532	+		PFLU_RS10920	0.37	-1.4
2,409,532	+		PFLU_RS10920	0.37	-0.9
2,409,532	+		PFLU_RS10920	0.37	+0.1
2,409,533	-		PFLU_RS10920	0.37	+0.8
2,409,533	-		PFLU_RS10920	0.37	+0.2
2,409,533	-		PFLU_RS10920	0.37	-0.6
2,409,533	-		PFLU_RS10920	0.37	-0.2
2,409,533	-		PFLU_RS10920	0.37	-0.4
2,409,533	-		PFLU_RS10920	0.37	-2.8
2,409,609	+		PFLU_RS10920	0.44	-2.2
2,409,610	-		PFLU_RS10920	0.45	+2.1
2,409,610	-		PFLU_RS10920	0.45	+2.1
2,409,783	+		PFLU_RS10920	0.62	+0.4
2,409,783	+		PFLU_RS10920	0.62	-0.9
2,409,783	+		PFLU_RS10920	0.62	-0.7
2,409,783	+		PFLU_RS10920	0.62	+1.1
2,409,783	+		PFLU_RS10920	0.62	-0.4
2,409,783	+		PFLU_RS10920	0.62	+1.3
2,409,783	+		PFLU_RS10920	0.62	-1.2
2,409,783	+		PFLU_RS10920	0.62	-1.8
2,409,784	-		PFLU_RS10920	0.62	-0.8
2,409,784	-		PFLU_RS10920	0.62	-0.9
2,409,784	-		PFLU_RS10920	0.62	-0.8
2,409,784	-		PFLU_RS10920	0.62	-1.3
2,409,784	-		PFLU_RS10920	0.62	-2.0
2,409,784	-		PFLU_RS10920	0.62	+2.6
2,409,784	-		PFLU_RS10920	0.62	+2.0
2,409,784	-		PFLU_RS10920	0.62	-1.8
2,409,831	+		PFLU_RS10920	0.67	-2.6
2,409,831	+		PFLU_RS10920	0.67	-0.4
2,409,831	+		PFLU_RS10920	0.67	+1.0
2,409,831	+		PFLU_RS10920	0.67	-0.7
2,409,832	-		PFLU_RS10920	0.67	-2.0
2,409,832	-		PFLU_RS10920	0.67	+1.0
2,409,832	-		PFLU_RS10920	0.67	-3.1
2,409,835	+		PFLU_RS10920	0.68	+0.1
2,409,835	+		PFLU_RS10920	0.68	+2.1
2,409,835	+		PFLU_RS10920	0.68	+1.0
2,409,835	+		PFLU_RS10920	0.68	-2.2
2,409,836	-		PFLU_RS10920	0.68	+2.0
2,409,861	+		PFLU_RS10920	0.70	-0.2
2,409,862	-		PFLU_RS10920	0.70	+0.3
2,409,879	+		PFLU_RS10920	0.72	-0.9
2,409,879	+		PFLU_RS10920	0.72	+0.0
2,409,880	-		PFLU_RS10920	0.72	+1.2
2,409,883	+		PFLU_RS10920	0.72	-1.8
2,409,883	+		PFLU_RS10920	0.72	+2.1
2,409,883	+		PFLU_RS10920	0.72	-0.6
2,409,883	+		PFLU_RS10920	0.72	-0.0
2,409,883	+		PFLU_RS10920	0.72	-0.4
2,409,883	+		PFLU_RS10920	0.72	+1.1
2,409,883	+		PFLU_RS10920	0.72	-1.6
2,409,883	+		PFLU_RS10920	0.72	-0.4
2,409,883	+		PFLU_RS10920	0.72	-1.1
2,409,883	+		PFLU_RS10920	0.72	+0.9
2,409,883	+		PFLU_RS10920	0.72	-0.5
2,409,883	+		PFLU_RS10920	0.72	+1.7
2,409,883	+		PFLU_RS10920	0.72	+0.5
2,409,884	-		PFLU_RS10920	0.73	-0.7
2,409,884	-		PFLU_RS10920	0.73	+0.6
2,409,884	-		PFLU_RS10920	0.73	+0.1
2,409,884	-		PFLU_RS10920	0.73	+0.8
2,409,884	-		PFLU_RS10920	0.73	+1.1
2,409,884	-		PFLU_RS10920	0.73	-1.7
2,409,884	-		PFLU_RS10920	0.73	+1.0
2,409,884	-		PFLU_RS10920	0.73	+0.3
2,409,884	-		PFLU_RS10920	0.73	+0.9
2,409,884	-		PFLU_RS10920	0.73	+0.7
2,409,884	-		PFLU_RS10920	0.73	-0.6
2,409,884	-		PFLU_RS10920	0.73	+0.6
2,409,884	-		PFLU_RS10920	0.73	+0.5
2,409,884	-		PFLU_RS10920	0.73	-0.2
2,409,884	-		PFLU_RS10920	0.73	-1.9
2,409,884	-		PFLU_RS10920	0.73	+1.1
2,409,884	-		PFLU_RS10920	0.73	-1.3
2,409,884	-		PFLU_RS10920	0.73	-1.9
2,409,884	-		PFLU_RS10920	0.73	+0.9
2,409,978	+		PFLU_RS10920	0.82	+1.1
2,409,978	+		PFLU_RS10920	0.82	+1.0
2,409,979	-		PFLU_RS10920	0.82	-2.6
2,409,979	-		PFLU_RS10920	0.82	-0.4
2,409,979	-		PFLU_RS10920	0.82	+0.0
2,410,008	+		PFLU_RS10920	0.85	+0.1
2,410,008	+		PFLU_RS10920	0.85	+1.6
2,410,008	+		PFLU_RS10920	0.85	-0.7
2,410,008	+		PFLU_RS10920	0.85	+1.8
2,410,008	+		PFLU_RS10920	0.85	-0.2
2,410,008	+		PFLU_RS10920	0.85	-1.2
2,410,008	+		PFLU_RS10920	0.85	-0.0
2,410,008	+		PFLU_RS10920	0.85	-0.8
2,410,009	-		PFLU_RS10920	0.85	-0.2
2,410,009	-		PFLU_RS10920	0.85	-0.9
2,410,009	-		PFLU_RS10920	0.85	+0.6
2,410,009	-		PFLU_RS10920	0.85	+0.1
2,410,009	-		PFLU_RS10920	0.85	+1.7
2,410,009	-		PFLU_RS10920	0.85	-0.4
2,410,127	+				-1.1
2,410,127	+				-0.7
2,410,127	+				-0.5
2,410,128	-				-1.2
2,410,171	+				+4.1