Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05420

Experiment: p-Coumaric (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) 5 mM
1,208,273	+				+2.8
1,208,274	-				+0.0
1,208,277	+				-0.9
1,208,278	-				+0.1
1,208,278	-				-0.6
1,208,294	+				-0.2
1,208,295	-				-2.3
1,208,317	-				-0.1
1,208,320	+				+2.3
1,208,321	-				-1.1
1,208,321	-				+0.2
1,208,321	-				-1.4
1,208,321	-				-0.1
1,208,327	-				-1.8
1,208,365	-				-2.1
1,208,429	-				+0.7
1,208,477	+				-1.2
1,208,477	+				-1.1
1,208,541	+				-1.1
1,208,542	-				+0.3
1,208,567	+				-0.2
1,208,568	-				-1.4
1,208,597	+				-2.8
1,208,608	-				-1.5
1,208,613	+				-1.8
1,208,614	-				-1.4
1,208,621	+				-1.9
1,208,621	+				-1.7
1,208,621	+				-2.7
1,208,622	-				-1.2
1,208,622	-				-0.9
1,208,695	+		PFLU_RS05415	0.10	-0.7
1,208,695	+		PFLU_RS05415	0.10	-2.2
1,208,695	+		PFLU_RS05415	0.10	+0.2
1,208,717	-		PFLU_RS05415	0.15	+1.0
1,208,717	-		PFLU_RS05415	0.15	-2.0
1,208,717	-		PFLU_RS05415	0.15	+0.0
1,208,752	+		PFLU_RS05415	0.22	+0.3
1,208,752	+		PFLU_RS05415	0.22	-0.5
1,208,752	+		PFLU_RS05415	0.22	+0.2
1,208,752	+		PFLU_RS05415	0.22	-0.6
1,208,752	+		PFLU_RS05415	0.22	+0.0
1,208,753	-		PFLU_RS05415	0.22	+1.0
1,208,753	-		PFLU_RS05415	0.22	-0.6
1,208,753	-		PFLU_RS05415	0.22	+0.9
1,208,753	-		PFLU_RS05415	0.22	-1.2
1,208,753	-		PFLU_RS05415	0.22	-0.8
1,208,824	+		PFLU_RS05415	0.36	-0.8
1,208,824	+		PFLU_RS05415	0.36	-1.6
1,208,825	-		PFLU_RS05415	0.36	-0.5
1,209,001	+		PFLU_RS05415	0.70	-1.2
1,209,001	+		PFLU_RS05415	0.70	+0.0
1,209,001	+		PFLU_RS05415	0.70	-1.7
1,209,001	+		PFLU_RS05415	0.70	-0.7
1,209,001	+		PFLU_RS05415	0.70	-2.5
1,209,001	+		PFLU_RS05415	0.70	-0.7
1,209,002	-		PFLU_RS05415	0.71	+1.6
1,209,049	+		PFLU_RS05415	0.80	+0.8
1,209,050	-		PFLU_RS05415	0.80	-0.7
1,209,050	-		PFLU_RS05415	0.80	+0.8
1,209,071	+		PFLU_RS05415	0.84	-0.4
1,209,071	+		PFLU_RS05415	0.84	-1.7
1,209,071	+		PFLU_RS05415	0.84	-1.1
1,209,071	+		PFLU_RS05415	0.84	-2.0
1,209,071	+		PFLU_RS05415	0.84	-0.7
1,209,071	+		PFLU_RS05415	0.84	-1.1
1,209,071	+		PFLU_RS05415	0.84	-2.0
1,209,071	+		PFLU_RS05415	0.84	-1.7
1,209,071	+		PFLU_RS05415	0.84	+0.9
1,209,071	+		PFLU_RS05415	0.84	-1.1
1,209,071	+		PFLU_RS05415	0.84	-1.9
1,209,071	+		PFLU_RS05415	0.84	-1.7
1,209,071	+		PFLU_RS05415	0.84	-1.4
1,209,071	+		PFLU_RS05415	0.84	-2.3
1,209,071	+		PFLU_RS05415	0.84	-2.4
1,209,071	+		PFLU_RS05415	0.84	+0.3
1,209,071	+		PFLU_RS05415	0.84	+1.0
1,209,071	+		PFLU_RS05415	0.84	-1.7
1,209,071	+		PFLU_RS05415	0.84	-1.8
1,209,071	+		PFLU_RS05415	0.84	-3.1
1,209,071	+		PFLU_RS05415	0.84	-1.4
1,209,071	+		PFLU_RS05415	0.84	-0.1
1,209,071	+		PFLU_RS05415	0.84	-0.8
1,209,071	+		PFLU_RS05415	0.84	-1.0
1,209,071	+		PFLU_RS05415	0.84	+0.9
1,209,071	+		PFLU_RS05415	0.84	-1.4
1,209,071	+		PFLU_RS05415	0.84	-0.7
1,209,071	+		PFLU_RS05415	0.84	+0.2
1,209,071	+		PFLU_RS05415	0.84	-0.8
1,209,071	+		PFLU_RS05415	0.84	-1.7
1,209,071	+		PFLU_RS05415	0.84	-1.6
1,209,071	+		PFLU_RS05415	0.84	-3.3
1,209,071	+		PFLU_RS05415	0.84	-1.0
1,209,071	+		PFLU_RS05415	0.84	-2.7
1,209,071	+		PFLU_RS05415	0.84	-0.4
1,209,071	+		PFLU_RS05415	0.84	-1.6
1,209,071	+		PFLU_RS05415	0.84	-2.2
1,209,071	+		PFLU_RS05415	0.84	-2.7
1,209,071	+		PFLU_RS05415	0.84	-3.6
1,209,071	+		PFLU_RS05415	0.84	-2.6
1,209,071	+		PFLU_RS05415	0.84	-1.0
1,209,071	+		PFLU_RS05415	0.84	+0.8
1,209,071	+		PFLU_RS05415	0.84	-1.4
1,209,071	+		PFLU_RS05415	0.84	-2.4
1,209,071	+		PFLU_RS05415	0.84	-2.7
1,209,072	-		PFLU_RS05415	0.84	+2.1
1,209,072	-		PFLU_RS05415	0.84	+0.3
1,209,072	-		PFLU_RS05415	0.84	-2.1
1,209,072	-		PFLU_RS05415	0.84	+0.5
1,209,072	-		PFLU_RS05415	0.84	-0.8
1,209,072	-		PFLU_RS05415	0.84	+0.5
1,209,072	-		PFLU_RS05415	0.84	-0.2
1,209,072	-		PFLU_RS05415	0.84	-2.2
1,209,072	-		PFLU_RS05415	0.84	-1.5
1,209,072	-		PFLU_RS05415	0.84	-0.8
1,209,072	-		PFLU_RS05415	0.84	+0.9
1,209,072	-		PFLU_RS05415	0.84	-0.2
1,209,072	-		PFLU_RS05415	0.84	-1.9
1,209,072	-		PFLU_RS05415	0.84	+0.3
1,209,072	-		PFLU_RS05415	0.84	-2.2
1,209,072	-		PFLU_RS05415	0.84	+0.2
1,209,072	-		PFLU_RS05415	0.84	+0.5
1,209,072	-		PFLU_RS05415	0.84	-0.8
1,209,072	-		PFLU_RS05415	0.84	-1.2
1,209,072	-		PFLU_RS05415	0.84	-1.6
1,209,072	-		PFLU_RS05415	0.84	+2.4
1,209,072	-		PFLU_RS05415	0.84	-0.1
1,209,072	-		PFLU_RS05415	0.84	+1.5
1,209,072	-		PFLU_RS05415	0.84	-0.8
1,209,072	-		PFLU_RS05415	0.84	+0.3
1,209,072	-		PFLU_RS05415	0.84	+1.3
1,209,072	-		PFLU_RS05415	0.84	+0.5
1,209,072	-		PFLU_RS05415	0.84	+0.8
1,209,072	-		PFLU_RS05415	0.84	+0.1
1,209,072	-		PFLU_RS05415	0.84	-0.7
1,209,072	-		PFLU_RS05415	0.84	-0.3
1,209,072	-		PFLU_RS05415	0.84	+0.3
1,209,072	-		PFLU_RS05415	0.84	+1.3
1,209,072	-		PFLU_RS05415	0.84	+0.6
1,209,072	-		PFLU_RS05415	0.84	-1.4
1,209,072	-		PFLU_RS05415	0.84	+3.2
1,209,072	-		PFLU_RS05415	0.84	-0.8
1,209,072	-		PFLU_RS05415	0.84	+0.3
1,209,072	-		PFLU_RS05415	0.84	+0.2
1,209,072	-		PFLU_RS05415	0.84	+0.8
1,209,072	-		PFLU_RS05415	0.84	-0.1
1,209,072	-		PFLU_RS05415	0.84	-0.2
1,209,072	-		PFLU_RS05415	0.84	-0.5
1,209,072	-		PFLU_RS05415	0.84	+0.4
1,209,072	-		PFLU_RS05415	0.84	+0.5
1,209,072	-		PFLU_RS05415	0.84	+0.6
1,209,072	-		PFLU_RS05415	0.84	-1.2
1,209,072	-		PFLU_RS05415	0.84	+1.2
1,209,075	+		PFLU_RS05415	0.85	-3.2
1,209,075	+		PFLU_RS05415	0.85	-2.1
1,209,075	+		PFLU_RS05415	0.85	-0.2
1,209,075	+		PFLU_RS05415	0.85	-2.7
1,209,075	+		PFLU_RS05415	0.85	-0.5
1,209,075	+		PFLU_RS05415	0.85	+0.2
1,209,075	+		PFLU_RS05415	0.85	+1.3
1,209,075	+		PFLU_RS05415	0.85	+1.6
1,209,075	+		PFLU_RS05415	0.85	-1.8
1,209,075	+		PFLU_RS05415	0.85	-1.8
1,209,075	+		PFLU_RS05415	0.85	-1.6
1,209,075	+		PFLU_RS05415	0.85	-0.2
1,209,075	+		PFLU_RS05415	0.85	-1.1
1,209,075	+		PFLU_RS05415	0.85	-1.0
1,209,075	+		PFLU_RS05415	0.85	-1.9
1,209,075	+		PFLU_RS05415	0.85	-1.4
1,209,075	+		PFLU_RS05415	0.85	-0.2
1,209,075	+		PFLU_RS05415	0.85	-3.2
1,209,076	-		PFLU_RS05415	0.85	-1.4
1,209,076	-		PFLU_RS05415	0.85	-2.0
1,209,076	-		PFLU_RS05415	0.85	+0.4
1,209,076	-		PFLU_RS05415	0.85	+0.5
1,209,076	-		PFLU_RS05415	0.85	+2.3
1,209,076	-		PFLU_RS05415	0.85	+2.3
1,209,076	-		PFLU_RS05415	0.85	-2.1
1,209,076	-		PFLU_RS05415	0.85	+0.9
1,209,076	-		PFLU_RS05415	0.85	+0.8
1,209,076	-		PFLU_RS05415	0.85	-2.4
1,209,076	-		PFLU_RS05415	0.85	-1.9
1,209,076	-		PFLU_RS05415	0.85	+1.2
1,209,076	-		PFLU_RS05415	0.85	-1.3
1,209,076	-		PFLU_RS05415	0.85	+0.2
1,209,076	-		PFLU_RS05415	0.85	-0.1
1,209,076	-		PFLU_RS05415	0.85	-1.6
1,209,076	-		PFLU_RS05415	0.85	+0.2
1,209,076	-		PFLU_RS05415	0.85	-2.0
1,209,076	-		PFLU_RS05415	0.85	-1.2
1,209,133	+				-3.5
1,209,133	+				-1.1
1,209,133	+				-1.4
1,209,133	+				-1.1
1,209,133	+				-0.8
1,209,133	+				-1.6
1,209,133	+				-3.6
1,209,133	+				-1.7
1,209,133	+				-1.0
1,209,134	-				-2.1
1,209,134	-				+1.6
1,209,134	-				+1.3
1,209,134	-				-1.0
1,209,134	-				+1.1
1,209,134	-				+1.0
1,209,143	+				-1.1
1,209,143	+				-2.7
1,209,144	-				-0.5
1,209,144	-				+1.8
1,209,144	-				-0.5
1,209,144	-				+0.0
1,209,144	-				+1.1
1,209,216	+				-3.0
1,209,216	+				-1.7
1,209,216	+				+0.3
1,209,216	+				+0.8
1,209,216	+				-2.9
1,209,216	+				-0.2
1,209,216	+				-1.0
1,209,216	+				-2.5
1,209,216	+				-0.5
1,209,216	+				-2.1
1,209,216	+				-0.5
1,209,216	+				-2.7
1,209,216	+				-0.5
1,209,216	+				-2.6
1,209,216	+				-1.1
1,209,216	+				-1.6
1,209,216	+				+1.3
1,209,216	+				-0.5
1,209,216	+				-2.9
1,209,216	+				-0.2
1,209,217	-				-1.9
1,209,217	-				-2.0
1,209,217	-				+0.8
1,209,217	-				+0.7
1,209,217	-				-0.5
1,209,217	-				-0.2
1,209,217	-				-0.8
1,209,217	-				+0.3
1,209,217	-				-0.3
1,209,217	-				+0.6
1,209,217	-				+0.5
1,209,217	-				-1.6
1,209,217	-				+0.3
1,209,217	-				-1.0
1,209,217	-				-1.2
1,209,237	+				-1.7
1,209,237	+				-1.2
1,209,238	-				-1.7
1,209,429	+		PFLU_RS05420	0.41	-2.8
1,209,429	+		PFLU_RS05420	0.41	-1.7
1,209,429	+		PFLU_RS05420	0.41	-1.4
1,209,429	+		PFLU_RS05420	0.41	-1.6
1,209,429	+		PFLU_RS05420	0.41	-2.1
1,209,429	+		PFLU_RS05420	0.41	-2.0
1,209,429	+		PFLU_RS05420	0.41	-2.1
1,209,430	-		PFLU_RS05420	0.41	+1.1
1,209,430	-		PFLU_RS05420	0.41	-2.1
1,209,430	-		PFLU_RS05420	0.41	+1.8
1,209,480	+		PFLU_RS05420	0.50	-2.1
1,209,480	+		PFLU_RS05420	0.50	-2.8
1,209,481	-		PFLU_RS05420	0.50	-2.1
1,209,481	-		PFLU_RS05420	0.50	-1.4
1,209,481	-		PFLU_RS05420	0.50	+1.6
1,209,481	-		PFLU_RS05420	0.50	-2.2
1,209,481	-		PFLU_RS05420	0.50	-2.7
1,209,481	-		PFLU_RS05420	0.50	+1.1
1,209,481	-		PFLU_RS05420	0.50	-2.1
1,209,658	+		PFLU_RS05420	0.82	-0.8
1,209,658	+		PFLU_RS05420	0.82	-2.6
1,209,659	-		PFLU_RS05420	0.82	-0.4
1,209,659	-		PFLU_RS05420	0.82	+0.0
1,209,659	-		PFLU_RS05420	0.82	-0.5
1,209,671	+		PFLU_RS05420	0.84	-2.0
1,209,671	+		PFLU_RS05420	0.84	-3.0
1,209,680	+		PFLU_RS05420	0.86	-2.6
1,209,681	-		PFLU_RS05420	0.86	-1.2
1,209,681	-		PFLU_RS05420	0.86	-0.2
1,209,681	-		PFLU_RS05420	0.86	-2.5
1,209,681	-		PFLU_RS05420	0.86	-1.1
1,209,749	+				-0.5
1,209,749	+				-0.7
1,209,749	+				-3.0
1,209,749	+				+0.4
1,209,786	-				-1.7
1,209,786	-				+0.2
1,209,786	-				-0.7
1,209,786	-				-0.5
1,209,853	+				-0.2
1,209,870	-				+0.4
1,209,870	-				-1.6
1,209,871	+				+1.9
1,209,871	+				+2.9
1,209,899	+				+0.2
1,209,947	+				-0.4
1,209,987	-				+0.9
1,210,075	+		PFLU_RS05425	0.11	+1.1
1,210,184	-		PFLU_RS05425	0.16	-2.2
1,210,184	-		PFLU_RS05425	0.16	+0.2
1,210,184	-		PFLU_RS05425	0.16	-0.8
1,210,193	+		PFLU_RS05425	0.16	-1.2
1,210,193	+		PFLU_RS05425	0.16	+0.7
1,210,193	+		PFLU_RS05425	0.16	-1.1
1,210,194	-		PFLU_RS05425	0.16	-0.7
1,210,194	-		PFLU_RS05425	0.16	+0.0
1,210,194	-		PFLU_RS05425	0.16	-0.3
1,210,194	-		PFLU_RS05425	0.16	-0.5
1,210,194	-		PFLU_RS05425	0.16	-0.2
1,210,221	+		PFLU_RS05425	0.17	-0.1
1,210,221	+		PFLU_RS05425	0.17	-1.6
1,210,221	+		PFLU_RS05425	0.17	-1.4
1,210,221	+		PFLU_RS05425	0.17	-2.0
1,210,221	+		PFLU_RS05425	0.17	-1.4
1,210,222	-		PFLU_RS05425	0.17	+1.0
1,210,222	-		PFLU_RS05425	0.17	-0.7
1,210,222	-		PFLU_RS05425	0.17	+0.7
1,210,222	-		PFLU_RS05425	0.17	-1.6
1,210,222	-		PFLU_RS05425	0.17	+2.5
1,210,230	+		PFLU_RS05425	0.17	+1.2
1,210,230	+		PFLU_RS05425	0.17	+0.0
1,210,230	+		PFLU_RS05425	0.17	-0.5
1,210,231	-		PFLU_RS05425	0.17	-1.5
1,210,241	+		PFLU_RS05425	0.18	-1.3
1,210,242	-		PFLU_RS05425	0.18	-0.8
1,210,242	-		PFLU_RS05425	0.18	-0.3
1,210,242	-		PFLU_RS05425	0.18	-2.0
1,210,296	+		PFLU_RS05425	0.20	+1.8
1,210,296	+		PFLU_RS05425	0.20	-0.7
1,210,297	-		PFLU_RS05425	0.20	+0.1
1,210,297	-		PFLU_RS05425	0.20	-2.2
1,210,297	-		PFLU_RS05425	0.20	-0.3
1,210,297	-		PFLU_RS05425	0.20	+1.3
1,210,297	-		PFLU_RS05425	0.20	+1.3
1,210,297	-		PFLU_RS05425	0.20	+2.0
1,210,297	-		PFLU_RS05425	0.20	-1.6
1,210,297	-		PFLU_RS05425	0.20	+2.3
1,210,297	-		PFLU_RS05425	0.20	+0.3
1,210,297	-		PFLU_RS05425	0.20	+0.3
1,210,320	+		PFLU_RS05425	0.21	-0.7
1,210,321	-		PFLU_RS05425	0.21	-1.4
1,210,321	-		PFLU_RS05425	0.21	+2.3
1,210,344	-		PFLU_RS05425	0.22	+0.2
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1,210,346	+		PFLU_RS05425	0.22	-0.9
1,210,347	-		PFLU_RS05425	0.22	-0.5
1,210,347	-		PFLU_RS05425	0.22	-0.2
1,210,443	+		PFLU_RS05425	0.26	-0.2
1,210,443	+		PFLU_RS05425	0.26	+2.9
1,210,443	+		PFLU_RS05425	0.26	-1.0
1,210,444	-		PFLU_RS05425	0.26	-1.4
1,210,444	-		PFLU_RS05425	0.26	+1.6
1,210,473	+		PFLU_RS05425	0.27	+0.0
1,210,476	+		PFLU_RS05425	0.27	+1.0
1,210,476	+		PFLU_RS05425	0.27	+0.3
1,210,476	+		PFLU_RS05425	0.27	+1.1
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1,210,476	+		PFLU_RS05425	0.27	+2.9
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1,210,477	-		PFLU_RS05425	0.27	+0.1
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1,210,530	+		PFLU_RS05425	0.29	+0.8
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1,210,530	+		PFLU_RS05425	0.29	+1.1
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1,210,530	+		PFLU_RS05425	0.29	-0.2
1,210,530	+		PFLU_RS05425	0.29	-0.7
1,210,531	-		PFLU_RS05425	0.29	-0.2
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1,210,536	+		PFLU_RS05425	0.29	-1.3
1,210,537	-		PFLU_RS05425	0.29	+0.3
1,210,608	-		PFLU_RS05425	0.32	+0.0
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1,210,692	+		PFLU_RS05425	0.35	+0.3
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1,210,693	-		PFLU_RS05425	0.35	+0.2
1,210,693	-		PFLU_RS05425	0.35	+1.0
1,210,693	-		PFLU_RS05425	0.35	-0.6
1,210,693	-		PFLU_RS05425	0.35	+0.8