Experiment: p-Coumaric (C) 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS04005 and PFLU_RS04010 are separated by 293 nucleotides PFLU_RS04010 and PFLU_RS04015 are separated by 0 nucleotides PFLU_RS04015 and PFLU_RS04020 are separated by 11 nucleotides
PFLU_RS04005: PFLU_RS04005 - catabolite repressor/activator, at 903,790 to 904,785
_RS04005
PFLU_RS04010: PFLU_RS04010 - phosphoenolpyruvate--protein phosphotransferase, at 905,079 to 907,937
_RS04010
PFLU_RS04015: PFLU_RS04015 - 1-phosphofructokinase, at 907,938 to 908,858
_RS04015
PFLU_RS04020: PFLU_RS04020 - PTS fructose-like transporter subunit IIB, at 908,870 to 910,582
_RS04020
Position (kb) 905
906
907
908 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 904.087 kb on + strand, within PFLU_RS04005 at 904.087 kb on + strand, within PFLU_RS04005 at 904.087 kb on + strand, within PFLU_RS04005 at 904.087 kb on + strand, within PFLU_RS04005 at 904.087 kb on + strand, within PFLU_RS04005 at 904.088 kb on - strand, within PFLU_RS04005 at 904.088 kb on - strand, within PFLU_RS04005 at 904.088 kb on - strand, within PFLU_RS04005 at 904.088 kb on - strand, within PFLU_RS04005 at 904.512 kb on - strand, within PFLU_RS04005 at 904.559 kb on + strand, within PFLU_RS04005 at 904.559 kb on + strand, within PFLU_RS04005 at 904.559 kb on + strand, within PFLU_RS04005 at 904.559 kb on + strand, within PFLU_RS04005 at 904.587 kb on + strand, within PFLU_RS04005 at 904.588 kb on - strand, within PFLU_RS04005 at 904.645 kb on - strand, within PFLU_RS04005 at 904.645 kb on - strand, within PFLU_RS04005 at 904.645 kb on - strand, within PFLU_RS04005 at 904.730 kb on + strand at 904.730 kb on + strand at 904.730 kb on + strand at 904.730 kb on + strand at 904.730 kb on + strand at 904.730 kb on + strand at 904.730 kb on + strand at 904.730 kb on + strand at 904.731 kb on - strand at 904.731 kb on - strand at 904.731 kb on - strand at 904.731 kb on - strand at 904.731 kb on - strand at 904.731 kb on - strand at 904.731 kb on - strand at 904.731 kb on - strand at 904.731 kb on - strand at 904.731 kb on - strand at 904.731 kb on - strand at 904.731 kb on - strand at 904.731 kb on - strand at 904.731 kb on - strand at 904.858 kb on + strand at 904.858 kb on + strand at 904.858 kb on + strand at 904.858 kb on + strand at 904.858 kb on + strand at 904.859 kb on - strand at 904.859 kb on - strand at 904.859 kb on - strand at 904.859 kb on - strand at 904.859 kb on - strand at 904.859 kb on - strand at 904.859 kb on - strand at 904.859 kb on - strand at 904.859 kb on - strand at 904.910 kb on + strand at 904.921 kb on - strand at 904.950 kb on + strand at 905.005 kb on + strand at 905.006 kb on - strand at 905.006 kb on - strand at 905.010 kb on - strand at 905.010 kb on - strand at 905.010 kb on - strand at 905.010 kb on - strand at 905.022 kb on + strand at 905.022 kb on + strand at 905.022 kb on + strand at 905.023 kb on - strand at 905.023 kb on - strand at 905.023 kb on - strand at 905.043 kb on + strand at 905.043 kb on + strand at 905.043 kb on + strand at 905.043 kb on + strand at 905.043 kb on + strand at 905.043 kb on + strand at 905.043 kb on + strand at 905.043 kb on + strand at 905.043 kb on + strand at 905.043 kb on + strand at 905.044 kb on - strand at 905.044 kb on - strand at 905.044 kb on - strand at 905.044 kb on - strand at 905.044 kb on - strand at 905.044 kb on - strand at 905.044 kb on - strand at 905.044 kb on - strand at 905.047 kb on + strand at 905.047 kb on + strand at 905.047 kb on + strand at 905.047 kb on + strand at 905.047 kb on + strand at 905.047 kb on + strand at 905.047 kb on + strand at 905.048 kb on - strand at 905.048 kb on - strand at 905.048 kb on - strand at 905.048 kb on - strand at 905.048 kb on - strand at 905.048 kb on - strand at 905.063 kb on + strand at 905.063 kb on + strand at 905.063 kb on + strand at 905.063 kb on + strand at 905.063 kb on + strand at 905.063 kb on + strand at 905.063 kb on + strand at 905.063 kb on + strand at 905.063 kb on + strand at 905.064 kb on - strand at 905.064 kb on - strand at 905.064 kb on - strand at 905.064 kb on - strand at 905.064 kb on - strand at 905.064 kb on - strand at 905.064 kb on - strand at 905.064 kb on - strand at 905.064 kb on - strand at 905.067 kb on + strand at 905.067 kb on + strand at 905.067 kb on + strand at 905.067 kb on + strand at 905.067 kb on + strand at 905.067 kb on + strand at 905.068 kb on - strand at 905.068 kb on - strand at 905.068 kb on - strand at 905.068 kb on - strand at 905.068 kb on - strand at 905.068 kb on - strand at 905.068 kb on - strand at 905.068 kb on - strand at 905.095 kb on + strand at 905.095 kb on + strand at 905.095 kb on + strand at 905.096 kb on - strand at 905.096 kb on - strand at 905.096 kb on - strand at 905.096 kb on - strand at 905.096 kb on - strand at 905.096 kb on - strand at 905.096 kb on - strand at 905.096 kb on - strand at 905.130 kb on - strand at 905.130 kb on - strand at 905.130 kb on - strand at 905.130 kb on - strand at 905.194 kb on - strand at 905.249 kb on + strand at 905.249 kb on + strand at 905.249 kb on + strand at 905.249 kb on + strand at 905.249 kb on + strand at 905.250 kb on - strand at 905.250 kb on - strand at 905.356 kb on + strand at 905.356 kb on + strand at 905.356 kb on + strand at 905.356 kb on + strand at 905.356 kb on + strand at 905.356 kb on + strand at 905.356 kb on + strand at 905.357 kb on - strand at 905.357 kb on - strand at 905.357 kb on - strand at 905.358 kb on + strand at 905.358 kb on + strand at 905.358 kb on + strand at 905.358 kb on + strand at 905.358 kb on + strand at 905.358 kb on + strand at 905.358 kb on + strand at 905.359 kb on - strand at 905.359 kb on - strand at 905.359 kb on - strand at 905.359 kb on - strand at 905.359 kb on - strand at 905.359 kb on - strand at 905.359 kb on - strand at 905.359 kb on - strand at 905.359 kb on - strand at 905.359 kb on - strand at 905.359 kb on - strand at 905.748 kb on + strand, within PFLU_RS04010 at 905.749 kb on - strand, within PFLU_RS04010 at 906.714 kb on + strand, within PFLU_RS04010 at 906.714 kb on + strand, within PFLU_RS04010 at 906.714 kb on + strand, within PFLU_RS04010 at 906.714 kb on + strand, within PFLU_RS04010 at 906.714 kb on + strand, within PFLU_RS04010 at 906.715 kb on - strand, within PFLU_RS04010 at 906.715 kb on - strand, within PFLU_RS04010 at 906.715 kb on - strand, within PFLU_RS04010 at 906.715 kb on - strand, within PFLU_RS04010 at 906.715 kb on - strand, within PFLU_RS04010 at 906.821 kb on + strand, within PFLU_RS04010 at 906.842 kb on + strand, within PFLU_RS04010 at 907.197 kb on + strand, within PFLU_RS04010 at 907.198 kb on - strand, within PFLU_RS04010 at 907.198 kb on - strand, within PFLU_RS04010 at 907.210 kb on + strand, within PFLU_RS04010 at 907.210 kb on + strand, within PFLU_RS04010 at 907.210 kb on + strand, within PFLU_RS04010 at 907.210 kb on + strand, within PFLU_RS04010 at 907.210 kb on + strand, within PFLU_RS04010 at 907.210 kb on + strand, within PFLU_RS04010 at 907.211 kb on - strand, within PFLU_RS04010 at 907.211 kb on - strand, within PFLU_RS04010 at 907.211 kb on - strand, within PFLU_RS04010 at 907.211 kb on - strand, within PFLU_RS04010 at 907.211 kb on - strand, within PFLU_RS04010 at 907.211 kb on - strand, within PFLU_RS04010 at 907.605 kb on + strand, within PFLU_RS04010 at 907.605 kb on + strand, within PFLU_RS04010 at 907.606 kb on - strand, within PFLU_RS04010 at 907.606 kb on - strand, within PFLU_RS04010 at 907.922 kb on - strand at 907.935 kb on + strand at 907.935 kb on + strand at 907.935 kb on + strand at 907.935 kb on + strand at 907.935 kb on + strand at 907.935 kb on + strand at 907.936 kb on - strand at 907.936 kb on - strand at 908.213 kb on + strand, within PFLU_RS04015 at 908.213 kb on + strand, within PFLU_RS04015 at 908.214 kb on - strand, within PFLU_RS04015 at 908.214 kb on - strand, within PFLU_RS04015 at 908.607 kb on + strand, within PFLU_RS04015 at 908.607 kb on + strand, within PFLU_RS04015 at 908.607 kb on + strand, within PFLU_RS04015 at 908.608 kb on - strand, within PFLU_RS04015 at 908.642 kb on + strand, within PFLU_RS04015 at 908.856 kb on + strand at 908.856 kb on + strand at 908.856 kb on + strand at 908.856 kb on + strand at 908.856 kb on + strand at 908.856 kb on + strand at 908.856 kb on + strand at 908.856 kb on + strand at 908.856 kb on + strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.857 kb on - strand at 908.877 kb on + strand at 908.877 kb on + strand at 908.878 kb on - strand at 908.888 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) 5 mM remove 904,087 + PFLU_RS04005 0.30 +1.9 904,087 + PFLU_RS04005 0.30 -1.1 904,087 + PFLU_RS04005 0.30 -2.6 904,087 + PFLU_RS04005 0.30 +3.6 904,087 + PFLU_RS04005 0.30 +1.4 904,088 - PFLU_RS04005 0.30 -0.1 904,088 - PFLU_RS04005 0.30 +1.2 904,088 - PFLU_RS04005 0.30 -0.4 904,088 - PFLU_RS04005 0.30 +1.9 904,512 - PFLU_RS04005 0.72 -0.3 904,559 + PFLU_RS04005 0.77 -2.5 904,559 + PFLU_RS04005 0.77 +2.4 904,559 + PFLU_RS04005 0.77 -0.4 904,559 + PFLU_RS04005 0.77 +0.1 904,587 + PFLU_RS04005 0.80 +0.7 904,588 - PFLU_RS04005 0.80 +0.1 904,645 - PFLU_RS04005 0.86 -0.8 904,645 - PFLU_RS04005 0.86 -1.1 904,645 - PFLU_RS04005 0.86 +1.3 904,730 + +1.5 904,730 + +2.1 904,730 + +2.4 904,730 + +1.4 904,730 + +2.3 904,730 + +1.6 904,730 + -2.6 904,730 + +1.9 904,731 - +1.0 904,731 - +0.9 904,731 - +1.9 904,731 - -0.3 904,731 - +3.1 904,731 - -0.0 904,731 - -0.9 904,731 - -0.9 904,731 - +2.7 904,731 - +0.6 904,731 - +0.9 904,731 - +0.2 904,731 - +0.7 904,731 - -0.8 904,858 + -1.3 904,858 + -0.1 904,858 + -0.0 904,858 + +1.3 904,858 + -0.5 904,859 - -0.8 904,859 - +0.9 904,859 - +1.4 904,859 - +1.9 904,859 - +1.9 904,859 - -2.0 904,859 - +0.4 904,859 - -2.4 904,859 - -1.7 904,910 + -0.9 904,921 - +1.4 904,950 + -1.4 905,005 + -0.7 905,006 - +2.1 905,006 - +0.7 905,010 - -1.6 905,010 - -1.1 905,010 - -0.4 905,010 - -1.0 905,022 + -2.1 905,022 + -0.4 905,022 + -1.6 905,023 - +0.4 905,023 - -1.4 905,023 - +1.0 905,043 + +1.1 905,043 + -1.4 905,043 + -2.2 905,043 + -0.6 905,043 + -0.1 905,043 + -0.1 905,043 + +0.1 905,043 + -0.7 905,043 + +1.7 905,043 + +0.5 905,044 - +3.2 905,044 - -2.1 905,044 - +0.3 905,044 - -0.7 905,044 - +0.3 905,044 - +1.1 905,044 - +1.1 905,044 - -0.5 905,047 + -0.4 905,047 + -0.2 905,047 + -0.0 905,047 + -1.1 905,047 + +0.6 905,047 + +0.4 905,047 + -0.7 905,048 - -0.4 905,048 - +1.9 905,048 - -0.4 905,048 - -0.4 905,048 - -1.5 905,048 - -1.6 905,063 + +3.2 905,063 + +0.4 905,063 + -1.8 905,063 + -0.6 905,063 + -1.0 905,063 + +4.2 905,063 + +0.4 905,063 + +1.9 905,063 + +0.1 905,064 - +1.7 905,064 - +2.4 905,064 - +1.9 905,064 - +1.5 905,064 - +2.0 905,064 - -1.0 905,064 - -0.1 905,064 - -0.2 905,064 - +1.3 905,067 + -0.3 905,067 + +1.0 905,067 + -0.2 905,067 + +0.6 905,067 + +0.6 905,067 + +0.5 905,068 - +0.7 905,068 - -2.3 905,068 - -0.7 905,068 - +0.3 905,068 - +0.2 905,068 - +0.1 905,068 - +0.3 905,068 - +0.4 905,095 + -1.1 905,095 + +0.3 905,095 + -1.5 905,096 - -2.0 905,096 - +2.4 905,096 - +0.7 905,096 - -1.8 905,096 - +0.9 905,096 - +0.1 905,096 - +2.2 905,096 - +0.6 905,130 - -1.1 905,130 - -1.2 905,130 - +0.6 905,130 - +0.6 905,194 - -3.2 905,249 + +1.5 905,249 + +0.0 905,249 + +0.8 905,249 + +0.1 905,249 + +0.3 905,250 - -1.5 905,250 - +1.3 905,356 + +0.7 905,356 + -1.4 905,356 + +1.0 905,356 + +0.4 905,356 + -2.0 905,356 + -0.1 905,356 + +0.3 905,357 - -1.1 905,357 - +0.9 905,357 - -0.8 905,358 + -0.8 905,358 + -1.0 905,358 + +0.6 905,358 + -0.8 905,358 + +0.3 905,358 + +0.1 905,358 + -1.1 905,359 - -2.0 905,359 - +1.9 905,359 - -1.0 905,359 - -0.1 905,359 - +2.2 905,359 - +0.7 905,359 - +2.4 905,359 - -0.3 905,359 - -0.4 905,359 - +0.8 905,359 - +0.1 905,748 + PFLU_RS04010 0.23 -1.5 905,749 - PFLU_RS04010 0.23 +0.3 906,714 + PFLU_RS04010 0.57 +0.2 906,714 + PFLU_RS04010 0.57 +0.4 906,714 + PFLU_RS04010 0.57 -1.3 906,714 + PFLU_RS04010 0.57 +0.1 906,714 + PFLU_RS04010 0.57 +0.6 906,715 - PFLU_RS04010 0.57 -1.7 906,715 - PFLU_RS04010 0.57 -1.4 906,715 - PFLU_RS04010 0.57 +0.5 906,715 - PFLU_RS04010 0.57 +0.7 906,715 - PFLU_RS04010 0.57 -2.4 906,821 + PFLU_RS04010 0.61 +1.1 906,842 + PFLU_RS04010 0.62 +0.7 907,197 + PFLU_RS04010 0.74 -1.3 907,198 - PFLU_RS04010 0.74 +1.4 907,198 - PFLU_RS04010 0.74 +0.0 907,210 + PFLU_RS04010 0.75 +2.8 907,210 + PFLU_RS04010 0.75 +2.3 907,210 + PFLU_RS04010 0.75 -0.4 907,210 + PFLU_RS04010 0.75 +0.1 907,210 + PFLU_RS04010 0.75 +1.7 907,210 + PFLU_RS04010 0.75 +1.6 907,211 - PFLU_RS04010 0.75 -0.7 907,211 - PFLU_RS04010 0.75 +0.3 907,211 - PFLU_RS04010 0.75 -0.4 907,211 - PFLU_RS04010 0.75 +0.0 907,211 - PFLU_RS04010 0.75 +0.9 907,211 - PFLU_RS04010 0.75 +0.9 907,605 + PFLU_RS04010 0.88 +1.0 907,605 + PFLU_RS04010 0.88 +4.6 907,606 - PFLU_RS04010 0.88 -0.6 907,606 - PFLU_RS04010 0.88 +0.4 907,922 - -0.5 907,935 + +1.9 907,935 + -1.1 907,935 + +1.0 907,935 + +3.7 907,935 + +1.2 907,935 + +0.4 907,936 - +0.6 907,936 - +0.7 908,213 + PFLU_RS04015 0.30 +0.6 908,213 + PFLU_RS04015 0.30 +0.4 908,214 - PFLU_RS04015 0.30 -0.4 908,214 - PFLU_RS04015 0.30 +1.4 908,607 + PFLU_RS04015 0.73 -1.3 908,607 + PFLU_RS04015 0.73 -0.6 908,607 + PFLU_RS04015 0.73 +2.0 908,608 - PFLU_RS04015 0.73 -0.4 908,642 + PFLU_RS04015 0.76 +1.4 908,856 + +1.7 908,856 + -0.5 908,856 + +0.9 908,856 + -1.1 908,856 + -0.5 908,856 + -0.1 908,856 + +1.4 908,856 + +1.4 908,856 + +1.1 908,857 - +0.7 908,857 - -1.6 908,857 - +1.3 908,857 - +1.1 908,857 - -0.4 908,857 - -0.4 908,857 - +0.1 908,857 - +0.6 908,857 - +0.3 908,857 - -1.3 908,857 - -0.3 908,857 - -1.8 908,877 + -0.6 908,877 + -0.2 908,878 - +5.6 908,888 - -0.8
Or see this region's nucleotide sequence