Experiment: p-Coumaric (C) 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS01840 and PFLU_RS01845 are separated by 185 nucleotides PFLU_RS01845 and PFLU_RS01850 are separated by 220 nucleotides
PFLU_RS01840: PFLU_RS01840 - glucans biosynthesis glucosyltransferase MdoH, at 414,404 to 416,974
_RS01840
PFLU_RS01845: PFLU_RS01845 - transporter substrate-binding domain-containing protein, at 417,160 to 417,960
_RS01845
PFLU_RS01850: PFLU_RS01850 - transporter substrate-binding domain-containing protein, at 418,181 to 418,978
_RS01850
Position (kb) 417
418 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7 at 416.301 kb on + strand, within PFLU_RS01840 at 416.579 kb on + strand, within PFLU_RS01840 at 416.579 kb on + strand, within PFLU_RS01840 at 416.579 kb on + strand, within PFLU_RS01840 at 416.579 kb on + strand, within PFLU_RS01840 at 416.579 kb on + strand, within PFLU_RS01840 at 416.579 kb on + strand, within PFLU_RS01840 at 416.579 kb on + strand, within PFLU_RS01840 at 416.580 kb on - strand, within PFLU_RS01840 at 416.580 kb on - strand, within PFLU_RS01840 at 416.580 kb on - strand, within PFLU_RS01840 at 416.580 kb on - strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.615 kb on + strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 416.616 kb on - strand, within PFLU_RS01840 at 417.025 kb on - strand at 417.025 kb on - strand at 417.025 kb on - strand at 417.057 kb on - strand at 417.099 kb on + strand at 417.099 kb on + strand at 417.099 kb on + strand at 417.100 kb on - strand at 417.123 kb on - strand at 417.123 kb on - strand at 417.123 kb on - strand at 417.123 kb on - strand at 417.139 kb on + strand at 417.173 kb on - strand at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.289 kb on + strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.290 kb on - strand, within PFLU_RS01845 at 417.403 kb on + strand, within PFLU_RS01845 at 417.592 kb on + strand, within PFLU_RS01845 at 417.692 kb on + strand, within PFLU_RS01845 at 417.692 kb on + strand, within PFLU_RS01845 at 417.726 kb on + strand, within PFLU_RS01845 at 417.726 kb on + strand, within PFLU_RS01845 at 417.726 kb on + strand, within PFLU_RS01845 at 417.727 kb on - strand, within PFLU_RS01845 at 417.727 kb on - strand, within PFLU_RS01845 at 417.727 kb on - strand, within PFLU_RS01845 at 417.727 kb on - strand, within PFLU_RS01845 at 417.727 kb on - strand, within PFLU_RS01845 at 417.727 kb on - strand, within PFLU_RS01845 at 417.727 kb on - strand, within PFLU_RS01845 at 417.742 kb on + strand, within PFLU_RS01845 at 417.742 kb on + strand, within PFLU_RS01845 at 417.742 kb on + strand, within PFLU_RS01845 at 417.742 kb on + strand, within PFLU_RS01845 at 417.742 kb on + strand, within PFLU_RS01845 at 417.742 kb on + strand, within PFLU_RS01845 at 417.743 kb on - strand, within PFLU_RS01845 at 417.743 kb on - strand, within PFLU_RS01845 at 417.743 kb on - strand, within PFLU_RS01845 at 417.804 kb on + strand, within PFLU_RS01845 at 417.804 kb on + strand, within PFLU_RS01845 at 417.804 kb on + strand, within PFLU_RS01845 at 417.804 kb on + strand, within PFLU_RS01845 at 417.805 kb on - strand, within PFLU_RS01845 at 417.805 kb on - strand, within PFLU_RS01845 at 417.901 kb on + strand at 417.901 kb on + strand at 417.901 kb on + strand at 417.901 kb on + strand at 417.901 kb on + strand at 417.901 kb on + strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.902 kb on - strand at 417.928 kb on - strand at 417.967 kb on + strand at 417.967 kb on + strand at 417.968 kb on - strand at 417.975 kb on + strand at 417.975 kb on + strand at 417.976 kb on - strand at 417.976 kb on - strand at 418.008 kb on + strand at 418.008 kb on + strand at 418.008 kb on + strand at 418.008 kb on + strand at 418.008 kb on + strand at 418.009 kb on - strand at 418.009 kb on - strand at 418.009 kb on - strand at 418.009 kb on - strand at 418.009 kb on - strand at 418.058 kb on + strand at 418.058 kb on + strand at 418.058 kb on + strand at 418.058 kb on + strand at 418.058 kb on + strand at 418.058 kb on + strand at 418.059 kb on - strand at 418.059 kb on - strand at 418.059 kb on - strand at 418.059 kb on - strand at 418.059 kb on - strand at 418.073 kb on + strand at 418.110 kb on - strand at 418.155 kb on - strand at 418.190 kb on + strand at 418.191 kb on - strand at 418.191 kb on - strand at 418.191 kb on - strand at 418.191 kb on - strand at 418.307 kb on + strand, within PFLU_RS01850 at 418.307 kb on + strand, within PFLU_RS01850 at 418.307 kb on + strand, within PFLU_RS01850 at 418.307 kb on + strand, within PFLU_RS01850 at 418.307 kb on + strand, within PFLU_RS01850 at 418.307 kb on + strand, within PFLU_RS01850 at 418.307 kb on + strand, within PFLU_RS01850 at 418.307 kb on + strand, within PFLU_RS01850 at 418.308 kb on - strand, within PFLU_RS01850 at 418.308 kb on - strand, within PFLU_RS01850 at 418.308 kb on - strand, within PFLU_RS01850 at 418.308 kb on - strand, within PFLU_RS01850 at 418.308 kb on - strand, within PFLU_RS01850 at 418.308 kb on - strand, within PFLU_RS01850 at 418.432 kb on + strand, within PFLU_RS01850 at 418.433 kb on - strand, within PFLU_RS01850 at 418.586 kb on + strand, within PFLU_RS01850 at 418.586 kb on + strand, within PFLU_RS01850 at 418.586 kb on + strand, within PFLU_RS01850 at 418.587 kb on - strand, within PFLU_RS01850 at 418.587 kb on - strand, within PFLU_RS01850 at 418.587 kb on - strand, within PFLU_RS01850 at 418.611 kb on - strand, within PFLU_RS01850 at 418.679 kb on + strand, within PFLU_RS01850 at 418.679 kb on + strand, within PFLU_RS01850 at 418.679 kb on + strand, within PFLU_RS01850 at 418.679 kb on + strand, within PFLU_RS01850 at 418.679 kb on + strand, within PFLU_RS01850 at 418.680 kb on - strand, within PFLU_RS01850 at 418.680 kb on - strand, within PFLU_RS01850 at 418.680 kb on - strand, within PFLU_RS01850 at 418.748 kb on + strand, within PFLU_RS01850 at 418.748 kb on + strand, within PFLU_RS01850 at 418.748 kb on + strand, within PFLU_RS01850 at 418.748 kb on + strand, within PFLU_RS01850 at 418.749 kb on - strand, within PFLU_RS01850 at 418.749 kb on - strand, within PFLU_RS01850 at 418.749 kb on - strand, within PFLU_RS01850 at 418.749 kb on - strand, within PFLU_RS01850 at 418.760 kb on + strand, within PFLU_RS01850 at 418.760 kb on + strand, within PFLU_RS01850 at 418.760 kb on + strand, within PFLU_RS01850 at 418.862 kb on + strand, within PFLU_RS01850 at 418.862 kb on + strand, within PFLU_RS01850 at 418.862 kb on + strand, within PFLU_RS01850 at 418.863 kb on - strand, within PFLU_RS01850 at 418.919 kb on + strand at 418.919 kb on + strand at 418.919 kb on + strand at 418.919 kb on + strand at 418.919 kb on + strand at 418.919 kb on + strand at 418.919 kb on + strand at 418.919 kb on + strand at 418.919 kb on + strand at 418.919 kb on + strand at 418.919 kb on + strand at 418.920 kb on - strand at 418.920 kb on - strand at 418.920 kb on - strand at 418.920 kb on - strand at 418.920 kb on - strand at 418.920 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) 5 mM remove 416,301 + PFLU_RS01840 0.74 +5.2 416,579 + PFLU_RS01840 0.85 +6.5 416,579 + PFLU_RS01840 0.85 +6.2 416,579 + PFLU_RS01840 0.85 +4.2 416,579 + PFLU_RS01840 0.85 +5.4 416,579 + PFLU_RS01840 0.85 +5.1 416,579 + PFLU_RS01840 0.85 +4.2 416,579 + PFLU_RS01840 0.85 +7.6 416,580 - PFLU_RS01840 0.85 +5.5 416,580 - PFLU_RS01840 0.85 +7.5 416,580 - PFLU_RS01840 0.85 +4.4 416,580 - PFLU_RS01840 0.85 +2.5 416,615 + PFLU_RS01840 0.86 +3.4 416,615 + PFLU_RS01840 0.86 +4.0 416,615 + PFLU_RS01840 0.86 +5.8 416,615 + PFLU_RS01840 0.86 +3.8 416,615 + PFLU_RS01840 0.86 +5.1 416,615 + PFLU_RS01840 0.86 +4.9 416,615 + PFLU_RS01840 0.86 +4.6 416,615 + PFLU_RS01840 0.86 +5.3 416,615 + PFLU_RS01840 0.86 +6.0 416,615 + PFLU_RS01840 0.86 +5.7 416,616 - PFLU_RS01840 0.86 +5.5 416,616 - PFLU_RS01840 0.86 +3.0 416,616 - PFLU_RS01840 0.86 +4.9 416,616 - PFLU_RS01840 0.86 +6.1 416,616 - PFLU_RS01840 0.86 +6.0 416,616 - PFLU_RS01840 0.86 +4.3 416,616 - PFLU_RS01840 0.86 +6.3 416,616 - PFLU_RS01840 0.86 +7.1 416,616 - PFLU_RS01840 0.86 +4.9 416,616 - PFLU_RS01840 0.86 +5.7 416,616 - PFLU_RS01840 0.86 +6.3 417,025 - +1.3 417,025 - +0.2 417,025 - +2.7 417,057 - +0.9 417,099 + -0.1 417,099 + +0.3 417,099 + +3.0 417,100 - -1.7 417,123 - -0.7 417,123 - -1.3 417,123 - +0.0 417,123 - +0.1 417,139 + +1.3 417,173 - -2.1 417,289 + PFLU_RS01845 0.16 -2.1 417,289 + PFLU_RS01845 0.16 -1.0 417,289 + PFLU_RS01845 0.16 -0.6 417,289 + PFLU_RS01845 0.16 +0.4 417,289 + PFLU_RS01845 0.16 -1.2 417,289 + PFLU_RS01845 0.16 +1.2 417,289 + PFLU_RS01845 0.16 +0.1 417,289 + PFLU_RS01845 0.16 -2.7 417,289 + PFLU_RS01845 0.16 -2.0 417,289 + PFLU_RS01845 0.16 +0.9 417,289 + PFLU_RS01845 0.16 +0.5 417,289 + PFLU_RS01845 0.16 +0.4 417,289 + PFLU_RS01845 0.16 -1.9 417,289 + PFLU_RS01845 0.16 +0.1 417,289 + PFLU_RS01845 0.16 +0.1 417,289 + PFLU_RS01845 0.16 -0.1 417,289 + PFLU_RS01845 0.16 -0.5 417,289 + PFLU_RS01845 0.16 -2.1 417,289 + PFLU_RS01845 0.16 +0.2 417,290 - PFLU_RS01845 0.16 +0.8 417,290 - PFLU_RS01845 0.16 +1.0 417,290 - PFLU_RS01845 0.16 -0.4 417,290 - PFLU_RS01845 0.16 +1.7 417,290 - PFLU_RS01845 0.16 -2.9 417,290 - PFLU_RS01845 0.16 +0.7 417,290 - PFLU_RS01845 0.16 +1.8 417,290 - PFLU_RS01845 0.16 +1.1 417,290 - PFLU_RS01845 0.16 +0.7 417,290 - PFLU_RS01845 0.16 +0.0 417,290 - PFLU_RS01845 0.16 +0.1 417,290 - PFLU_RS01845 0.16 -2.1 417,290 - PFLU_RS01845 0.16 -0.1 417,290 - PFLU_RS01845 0.16 -0.7 417,403 + PFLU_RS01845 0.30 -0.2 417,592 + PFLU_RS01845 0.54 +0.7 417,692 + PFLU_RS01845 0.66 +1.5 417,692 + PFLU_RS01845 0.66 -1.1 417,726 + PFLU_RS01845 0.71 +0.3 417,726 + PFLU_RS01845 0.71 +1.3 417,726 + PFLU_RS01845 0.71 -0.3 417,727 - PFLU_RS01845 0.71 +3.0 417,727 - PFLU_RS01845 0.71 +2.3 417,727 - PFLU_RS01845 0.71 +2.3 417,727 - PFLU_RS01845 0.71 -0.5 417,727 - PFLU_RS01845 0.71 -0.1 417,727 - PFLU_RS01845 0.71 -3.2 417,727 - PFLU_RS01845 0.71 +0.3 417,742 + PFLU_RS01845 0.73 +1.7 417,742 + PFLU_RS01845 0.73 +0.5 417,742 + PFLU_RS01845 0.73 +1.3 417,742 + PFLU_RS01845 0.73 +0.3 417,742 + PFLU_RS01845 0.73 +0.5 417,742 + PFLU_RS01845 0.73 +1.5 417,743 - PFLU_RS01845 0.73 -1.4 417,743 - PFLU_RS01845 0.73 -0.7 417,743 - PFLU_RS01845 0.73 +0.7 417,804 + PFLU_RS01845 0.80 -1.5 417,804 + PFLU_RS01845 0.80 +1.7 417,804 + PFLU_RS01845 0.80 +2.1 417,804 + PFLU_RS01845 0.80 -0.3 417,805 - PFLU_RS01845 0.81 +1.5 417,805 - PFLU_RS01845 0.81 -0.2 417,901 + +2.4 417,901 + +0.3 417,901 + +1.1 417,901 + -0.1 417,901 + +0.3 417,901 + -0.6 417,902 - -1.5 417,902 - +0.9 417,902 - -0.8 417,902 - +1.7 417,902 - -0.8 417,902 - +0.7 417,902 - +2.3 417,902 - -0.6 417,902 - -0.7 417,902 - -2.0 417,902 - +1.3 417,928 - +0.1 417,967 + +0.1 417,967 + +0.3 417,968 - +0.9 417,975 + +1.7 417,975 + -0.5 417,976 - -0.5 417,976 - +0.7 418,008 + -0.3 418,008 + -0.8 418,008 + +0.3 418,008 + -2.1 418,008 + +0.7 418,009 - +1.3 418,009 - +0.5 418,009 - -1.0 418,009 - -0.7 418,009 - +0.6 418,058 + -0.3 418,058 + -0.1 418,058 + -2.3 418,058 + +1.1 418,058 + -1.7 418,058 + -0.7 418,059 - +1.5 418,059 - +0.3 418,059 - +1.1 418,059 - +0.9 418,059 - -0.5 418,073 + +0.3 418,110 - +0.0 418,155 - -0.2 418,190 + -1.3 418,191 - +0.9 418,191 - -0.0 418,191 - -0.6 418,191 - -0.9 418,307 + PFLU_RS01850 0.16 +0.7 418,307 + PFLU_RS01850 0.16 -0.1 418,307 + PFLU_RS01850 0.16 -1.1 418,307 + PFLU_RS01850 0.16 +1.1 418,307 + PFLU_RS01850 0.16 -0.7 418,307 + PFLU_RS01850 0.16 +1.8 418,307 + PFLU_RS01850 0.16 -0.5 418,307 + PFLU_RS01850 0.16 +0.5 418,308 - PFLU_RS01850 0.16 -1.2 418,308 - PFLU_RS01850 0.16 -1.4 418,308 - PFLU_RS01850 0.16 -0.1 418,308 - PFLU_RS01850 0.16 +2.0 418,308 - PFLU_RS01850 0.16 +2.7 418,308 - PFLU_RS01850 0.16 +0.7 418,432 + PFLU_RS01850 0.31 +0.6 418,433 - PFLU_RS01850 0.32 -1.1 418,586 + PFLU_RS01850 0.51 -1.7 418,586 + PFLU_RS01850 0.51 -0.1 418,586 + PFLU_RS01850 0.51 -1.1 418,587 - PFLU_RS01850 0.51 +1.4 418,587 - PFLU_RS01850 0.51 -0.3 418,587 - PFLU_RS01850 0.51 -0.1 418,611 - PFLU_RS01850 0.54 -0.4 418,679 + PFLU_RS01850 0.62 +0.9 418,679 + PFLU_RS01850 0.62 +0.7 418,679 + PFLU_RS01850 0.62 -0.7 418,679 + PFLU_RS01850 0.62 +0.7 418,679 + PFLU_RS01850 0.62 -0.1 418,680 - PFLU_RS01850 0.63 +1.3 418,680 - PFLU_RS01850 0.63 +1.0 418,680 - PFLU_RS01850 0.63 +0.2 418,748 + PFLU_RS01850 0.71 +1.1 418,748 + PFLU_RS01850 0.71 +1.8 418,748 + PFLU_RS01850 0.71 +0.8 418,748 + PFLU_RS01850 0.71 +0.2 418,749 - PFLU_RS01850 0.71 -0.3 418,749 - PFLU_RS01850 0.71 +2.1 418,749 - PFLU_RS01850 0.71 -0.9 418,749 - PFLU_RS01850 0.71 -1.8 418,760 + PFLU_RS01850 0.73 -0.2 418,760 + PFLU_RS01850 0.73 +1.7 418,760 + PFLU_RS01850 0.73 -0.3 418,862 + PFLU_RS01850 0.85 -0.7 418,862 + PFLU_RS01850 0.85 +0.9 418,862 + PFLU_RS01850 0.85 -0.4 418,863 - PFLU_RS01850 0.85 +1.1 418,919 + -1.0 418,919 + -2.2 418,919 + -1.4 418,919 + +0.7 418,919 + -0.8 418,919 + -0.6 418,919 + +1.2 418,919 + +0.9 418,919 + -0.2 418,919 + +0.9 418,919 + +0.4 418,920 - -0.5 418,920 - +0.5 418,920 - -0.2 418,920 - -0.6 418,920 - -1.8 418,920 - -1.8
Or see this region's nucleotide sequence