Experiment: RCH2_defined_1percent_glucose; no stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16325 and BWI76_RS16330 are separated by 56 nucleotides BWI76_RS16330 and BWI76_RS16335 are separated by 177 nucleotides BWI76_RS16335 and BWI76_RS16340 are separated by 103 nucleotides
BWI76_RS16325: BWI76_RS16325 - adenosine deaminase, at 3,388,669 to 3,389,670
_RS16325
BWI76_RS16330: BWI76_RS16330 - oxidoreductase, at 3,389,727 to 3,390,767
_RS16330
BWI76_RS16335: BWI76_RS16335 - division septum protein Blr, at 3,390,945 to 3,391,094
_RS16335
BWI76_RS16340: BWI76_RS16340 - aryl-phospho-beta-D-glucosidase, at 3,391,198 to 3,392,568
_RS16340
Position (kb) 3389
3390
3391 Strain fitness (log2 ratio) -1
0
1
2 at 3388.813 kb on - strand, within BWI76_RS16325 at 3388.852 kb on + strand, within BWI76_RS16325 at 3388.873 kb on - strand, within BWI76_RS16325 at 3388.944 kb on + strand, within BWI76_RS16325 at 3389.252 kb on - strand, within BWI76_RS16325 at 3389.421 kb on + strand, within BWI76_RS16325 at 3389.725 kb on + strand at 3390.090 kb on + strand, within BWI76_RS16330 at 3390.199 kb on - strand, within BWI76_RS16330 at 3390.437 kb on - strand, within BWI76_RS16330 at 3390.553 kb on - strand, within BWI76_RS16330 at 3390.856 kb on - strand at 3391.018 kb on - strand, within BWI76_RS16335 at 3391.100 kb on + strand at 3391.237 kb on + strand at 3391.303 kb on - strand at 3391.330 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_1percent_glucose; no stress remove 3,388,813 - BWI76_RS16325 0.14 -0.6 3,388,852 + BWI76_RS16325 0.18 +0.2 3,388,873 - BWI76_RS16325 0.20 -0.3 3,388,944 + BWI76_RS16325 0.27 -0.9 3,389,252 - BWI76_RS16325 0.58 +0.3 3,389,421 + BWI76_RS16325 0.75 -0.7 3,389,725 + +0.5 3,390,090 + BWI76_RS16330 0.35 +1.2 3,390,199 - BWI76_RS16330 0.45 +0.4 3,390,437 - BWI76_RS16330 0.68 -0.3 3,390,553 - BWI76_RS16330 0.79 +2.6 3,390,856 - +0.7 3,391,018 - BWI76_RS16335 0.49 +0.4 3,391,100 + +0.2 3,391,237 + +0.2 3,391,303 - +0.2 3,391,330 - +0.1
Or see this region's nucleotide sequence