Experiment: RCH2_defined_1percent_glucose; no stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13010 and BWI76_RS13015 are separated by 415 nucleotides BWI76_RS13015 and BWI76_RS13020 are separated by 96 nucleotides
BWI76_RS13010: BWI76_RS13010 - LysR family transcriptional regulator, at 2,714,488 to 2,715,408
_RS13010
BWI76_RS13015: BWI76_RS13015 - LysR family transcriptional regulator, at 2,715,824 to 2,716,735
_RS13015
BWI76_RS13020: BWI76_RS13020 - NmrA family protein, at 2,716,832 to 2,717,821
_RS13020
Position (kb)
2715
2716
2717 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2714.843 kb on - strand, within BWI76_RS13010 at 2715.004 kb on + strand, within BWI76_RS13010 at 2715.092 kb on - strand, within BWI76_RS13010 at 2715.184 kb on + strand, within BWI76_RS13010 at 2715.237 kb on - strand, within BWI76_RS13010 at 2715.401 kb on + strand at 2715.759 kb on - strand at 2715.800 kb on - strand at 2715.900 kb on + strand at 2715.905 kb on + strand at 2715.908 kb on - strand at 2715.910 kb on + strand at 2715.918 kb on - strand, within BWI76_RS13015 at 2715.974 kb on - strand, within BWI76_RS13015 at 2715.979 kb on - strand, within BWI76_RS13015 at 2716.020 kb on - strand, within BWI76_RS13015 at 2716.046 kb on - strand, within BWI76_RS13015 at 2716.054 kb on + strand, within BWI76_RS13015 at 2716.238 kb on - strand, within BWI76_RS13015 at 2716.688 kb on - strand at 2716.728 kb on - strand at 2717.120 kb on + strand, within BWI76_RS13020 at 2717.144 kb on - strand, within BWI76_RS13020 at 2717.359 kb on + strand, within BWI76_RS13020 at 2717.457 kb on - strand, within BWI76_RS13020 at 2717.654 kb on + strand, within BWI76_RS13020
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_1percent_glucose; no stress remove 2,714,843 - BWI76_RS13010 0.39 +0.6 2,715,004 + BWI76_RS13010 0.56 -1.1 2,715,092 - BWI76_RS13010 0.66 -1.0 2,715,184 + BWI76_RS13010 0.76 -1.0 2,715,237 - BWI76_RS13010 0.81 -2.0 2,715,401 + -0.0 2,715,759 - -1.0 2,715,800 - -1.1 2,715,900 + -1.0 2,715,905 + +0.2 2,715,908 - -0.2 2,715,910 + -0.5 2,715,918 - BWI76_RS13015 0.10 +0.4 2,715,974 - BWI76_RS13015 0.16 +2.0 2,715,979 - BWI76_RS13015 0.17 -0.4 2,716,020 - BWI76_RS13015 0.21 +1.1 2,716,046 - BWI76_RS13015 0.24 +0.0 2,716,054 + BWI76_RS13015 0.25 +0.8 2,716,238 - BWI76_RS13015 0.45 -0.1 2,716,688 - +0.7 2,716,728 - +1.7 2,717,120 + BWI76_RS13020 0.29 +0.1 2,717,144 - BWI76_RS13020 0.32 +0.3 2,717,359 + BWI76_RS13020 0.53 +0.3 2,717,457 - BWI76_RS13020 0.63 +0.3 2,717,654 + BWI76_RS13020 0.83 +0.8
Or see this region's nucleotide sequence