Experiment: RCH2_defined_1percent_glucose; no stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00050 and BWI76_RS00055 are separated by 133 nucleotides BWI76_RS00055 and BWI76_RS00060 are separated by 57 nucleotides BWI76_RS00060 and BWI76_RS00065 are separated by 147 nucleotides
BWI76_RS00050: BWI76_RS00050 - tRNA modification GTPase, at 9,264 to 10,628
_RS00050
BWI76_RS00055: BWI76_RS00055 - N-acetyltransferase, at 10,762 to 11,169
_RS00055
BWI76_RS00060: BWI76_RS00060 - N-acetylneuraminate lyase, at 11,227 to 12,123
_RS00060
BWI76_RS00065: BWI76_RS00065 - MurR/RpiR family transcriptional regulator, at 12,271 to 13,152
_RS00065
Position (kb)
11
12
13 Strain fitness (log2 ratio)
-1
0
1 at 10.715 kb on + strand at 10.715 kb on + strand at 10.723 kb on - strand at 10.723 kb on - strand at 10.759 kb on + strand at 10.767 kb on - strand at 11.006 kb on - strand, within BWI76_RS00055 at 11.485 kb on + strand, within BWI76_RS00060 at 11.485 kb on + strand, within BWI76_RS00060 at 11.697 kb on - strand, within BWI76_RS00060 at 11.935 kb on - strand, within BWI76_RS00060 at 12.356 kb on - strand at 12.428 kb on + strand, within BWI76_RS00065 at 12.436 kb on - strand, within BWI76_RS00065 at 12.465 kb on - strand, within BWI76_RS00065 at 12.527 kb on - strand, within BWI76_RS00065 at 12.584 kb on + strand, within BWI76_RS00065 at 12.584 kb on + strand, within BWI76_RS00065 at 12.695 kb on - strand, within BWI76_RS00065 at 12.749 kb on + strand, within BWI76_RS00065 at 12.749 kb on + strand, within BWI76_RS00065 at 12.822 kb on + strand, within BWI76_RS00065
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_1percent_glucose; no stress remove 10,715 + +1.1 10,715 + +0.3 10,723 - +0.7 10,723 - +1.0 10,759 + -0.5 10,767 - +0.2 11,006 - BWI76_RS00055 0.60 +0.7 11,485 + BWI76_RS00060 0.29 +0.2 11,485 + BWI76_RS00060 0.29 +1.5 11,697 - BWI76_RS00060 0.52 +0.2 11,935 - BWI76_RS00060 0.79 +0.7 12,356 - -0.4 12,428 + BWI76_RS00065 0.18 +0.3 12,436 - BWI76_RS00065 0.19 +1.4 12,465 - BWI76_RS00065 0.22 +0.8 12,527 - BWI76_RS00065 0.29 -0.7 12,584 + BWI76_RS00065 0.35 -0.5 12,584 + BWI76_RS00065 0.35 -0.3 12,695 - BWI76_RS00065 0.48 -1.4 12,749 + BWI76_RS00065 0.54 -0.0 12,749 + BWI76_RS00065 0.54 -0.5 12,822 + BWI76_RS00065 0.62 +0.4
Or see this region's nucleotide sequence