Experiment: Zinc 0.12 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2756 and Psest_2757 are separated by 138 nucleotides Psest_2757 and Psest_2758 are separated by 132 nucleotides Psest_2758 and Psest_2759 are separated by 62 nucleotides Psest_2759 and Psest_2760 are separated by 19 nucleotides
Psest_2756: Psest_2756 - hypothetical protein, at 2,945,799 to 2,945,921
_2756
Psest_2757: Psest_2757 - hypothetical protein, at 2,946,060 to 2,946,209
_2757
Psest_2758: Psest_2758 - Predicted transcriptional regulators, at 2,946,342 to 2,946,743
_2758
Psest_2759: Psest_2759 - Co/Zn/Cd efflux system component, at 2,946,806 to 2,947,453
_2759
Psest_2760: Psest_2760 - hypothetical protein, at 2,947,473 to 2,949,416
_2760
Position (kb)
2946
2947
2948 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2945.901 kb on + strand, within Psest_2756 at 2945.901 kb on + strand, within Psest_2756 at 2945.961 kb on - strand at 2945.987 kb on + strand at 2946.152 kb on - strand, within Psest_2757 at 2946.161 kb on - strand, within Psest_2757 at 2946.292 kb on + strand at 2946.292 kb on + strand at 2946.293 kb on - strand at 2946.293 kb on - strand at 2946.343 kb on + strand at 2946.343 kb on + strand at 2946.344 kb on - strand at 2946.487 kb on - strand, within Psest_2758 at 2946.679 kb on + strand, within Psest_2758 at 2946.679 kb on + strand, within Psest_2758 at 2946.679 kb on + strand, within Psest_2758 at 2946.682 kb on + strand, within Psest_2758 at 2946.757 kb on - strand at 2946.992 kb on + strand, within Psest_2759 at 2947.083 kb on + strand, within Psest_2759 at 2947.182 kb on + strand, within Psest_2759 at 2947.182 kb on + strand, within Psest_2759 at 2947.183 kb on - strand, within Psest_2759 at 2947.183 kb on - strand, within Psest_2759 at 2947.202 kb on + strand, within Psest_2759 at 2947.202 kb on + strand, within Psest_2759 at 2947.202 kb on + strand, within Psest_2759 at 2947.202 kb on + strand, within Psest_2759 at 2947.202 kb on + strand, within Psest_2759 at 2947.202 kb on + strand, within Psest_2759 at 2947.203 kb on - strand, within Psest_2759 at 2947.203 kb on - strand, within Psest_2759 at 2947.203 kb on - strand, within Psest_2759 at 2947.245 kb on + strand, within Psest_2759 at 2947.246 kb on - strand, within Psest_2759 at 2947.475 kb on - strand at 2947.543 kb on + strand at 2947.544 kb on - strand at 2947.822 kb on + strand, within Psest_2760 at 2947.823 kb on - strand, within Psest_2760 at 2947.834 kb on + strand, within Psest_2760 at 2947.861 kb on + strand, within Psest_2760 at 2947.861 kb on + strand, within Psest_2760 at 2947.861 kb on + strand, within Psest_2760 at 2947.861 kb on + strand, within Psest_2760 at 2947.861 kb on + strand, within Psest_2760 at 2947.861 kb on + strand, within Psest_2760 at 2947.861 kb on + strand, within Psest_2760 at 2947.861 kb on + strand, within Psest_2760 at 2947.861 kb on + strand, within Psest_2760 at 2947.861 kb on + strand, within Psest_2760 at 2947.862 kb on - strand, within Psest_2760 at 2947.862 kb on - strand, within Psest_2760 at 2947.862 kb on - strand, within Psest_2760 at 2947.862 kb on - strand, within Psest_2760 at 2947.862 kb on - strand, within Psest_2760 at 2947.862 kb on - strand, within Psest_2760 at 2947.862 kb on - strand, within Psest_2760 at 2947.862 kb on - strand, within Psest_2760 at 2947.862 kb on - strand, within Psest_2760 at 2947.862 kb on - strand, within Psest_2760 at 2947.862 kb on - strand, within Psest_2760 at 2947.862 kb on - strand, within Psest_2760 at 2947.862 kb on - strand, within Psest_2760 at 2947.892 kb on + strand, within Psest_2760 at 2947.893 kb on - strand, within Psest_2760 at 2947.893 kb on - strand, within Psest_2760 at 2948.338 kb on + strand, within Psest_2760
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 0.12 mM remove 2,945,901 + Psest_2756 0.83 -0.5 2,945,901 + Psest_2756 0.83 -2.2 2,945,961 - +0.9 2,945,987 + -0.0 2,946,152 - Psest_2757 0.61 +1.2 2,946,161 - Psest_2757 0.67 -0.0 2,946,292 + +0.2 2,946,292 + -0.3 2,946,293 - +0.2 2,946,293 - -0.1 2,946,343 + +0.9 2,946,343 + +0.8 2,946,344 - +1.0 2,946,487 - Psest_2758 0.36 +0.3 2,946,679 + Psest_2758 0.84 +0.1 2,946,679 + Psest_2758 0.84 -0.4 2,946,679 + Psest_2758 0.84 -1.1 2,946,682 + Psest_2758 0.85 +0.9 2,946,757 - -3.2 2,946,992 + Psest_2759 0.29 -1.9 2,947,083 + Psest_2759 0.43 -0.7 2,947,182 + Psest_2759 0.58 -1.4 2,947,182 + Psest_2759 0.58 -1.7 2,947,183 - Psest_2759 0.58 -1.9 2,947,183 - Psest_2759 0.58 -2.6 2,947,202 + Psest_2759 0.61 -3.4 2,947,202 + Psest_2759 0.61 -2.8 2,947,202 + Psest_2759 0.61 -3.8 2,947,202 + Psest_2759 0.61 -3.1 2,947,202 + Psest_2759 0.61 -1.8 2,947,202 + Psest_2759 0.61 -2.2 2,947,203 - Psest_2759 0.61 -2.8 2,947,203 - Psest_2759 0.61 -2.6 2,947,203 - Psest_2759 0.61 -3.2 2,947,245 + Psest_2759 0.68 -3.2 2,947,246 - Psest_2759 0.68 -0.5 2,947,475 - +0.6 2,947,543 + -0.8 2,947,544 - -1.6 2,947,822 + Psest_2760 0.18 +0.5 2,947,823 - Psest_2760 0.18 -0.2 2,947,834 + Psest_2760 0.19 +0.1 2,947,861 + Psest_2760 0.20 -0.5 2,947,861 + Psest_2760 0.20 -0.9 2,947,861 + Psest_2760 0.20 +0.8 2,947,861 + Psest_2760 0.20 -0.1 2,947,861 + Psest_2760 0.20 -1.9 2,947,861 + Psest_2760 0.20 -0.1 2,947,861 + Psest_2760 0.20 -1.2 2,947,861 + Psest_2760 0.20 +1.0 2,947,861 + Psest_2760 0.20 -0.6 2,947,861 + Psest_2760 0.20 +0.8 2,947,862 - Psest_2760 0.20 -2.6 2,947,862 - Psest_2760 0.20 -2.7 2,947,862 - Psest_2760 0.20 +1.5 2,947,862 - Psest_2760 0.20 -0.7 2,947,862 - Psest_2760 0.20 +1.7 2,947,862 - Psest_2760 0.20 -0.2 2,947,862 - Psest_2760 0.20 -1.3 2,947,862 - Psest_2760 0.20 +2.0 2,947,862 - Psest_2760 0.20 -0.8 2,947,862 - Psest_2760 0.20 +1.2 2,947,862 - Psest_2760 0.20 -1.0 2,947,862 - Psest_2760 0.20 +0.6 2,947,862 - Psest_2760 0.20 -0.4 2,947,892 + Psest_2760 0.22 +0.4 2,947,893 - Psest_2760 0.22 -0.1 2,947,893 - Psest_2760 0.22 +0.6 2,948,338 + Psest_2760 0.44 +1.6
Or see this region's nucleotide sequence