Experiment: Zinc 0.12 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2263 and Psest_2264 overlap by 4 nucleotides Psest_2264 and Psest_2265 overlap by 4 nucleotides
Psest_2263: Psest_2263 - heavy metal efflux pump (cobalt-zinc-cadmium), at 2,409,104 to 2,412,226
_2263
Psest_2264: Psest_2264 - RND family efflux transporter, MFP subunit, at 2,412,223 to 2,413,710
_2264
Psest_2265: Psest_2265 - Outer membrane protein, at 2,413,707 to 2,414,960
_2265
Position (kb)
2412
2413
2414 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2411.254 kb on - strand, within Psest_2263 at 2411.254 kb on - strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.542 kb on - strand, within Psest_2263 at 2411.542 kb on - strand, within Psest_2263 at 2411.542 kb on - strand, within Psest_2263 at 2411.542 kb on - strand, within Psest_2263 at 2411.542 kb on - strand, within Psest_2263 at 2411.542 kb on - strand, within Psest_2263 at 2411.542 kb on - strand, within Psest_2263 at 2411.542 kb on - strand, within Psest_2263 at 2411.668 kb on - strand, within Psest_2263 at 2411.730 kb on + strand, within Psest_2263 at 2411.731 kb on - strand, within Psest_2263 at 2411.731 kb on - strand, within Psest_2263 at 2411.731 kb on - strand, within Psest_2263 at 2411.890 kb on - strand, within Psest_2263 at 2411.890 kb on - strand, within Psest_2263 at 2411.917 kb on - strand at 2411.942 kb on + strand at 2411.943 kb on - strand at 2411.943 kb on - strand at 2411.946 kb on + strand at 2411.946 kb on + strand at 2411.946 kb on + strand at 2411.946 kb on + strand at 2411.946 kb on + strand at 2411.947 kb on - strand at 2411.947 kb on - strand at 2411.947 kb on - strand at 2411.947 kb on - strand at 2411.947 kb on - strand at 2412.378 kb on + strand, within Psest_2264 at 2412.379 kb on - strand, within Psest_2264 at 2412.379 kb on - strand, within Psest_2264 at 2412.379 kb on - strand, within Psest_2264 at 2412.460 kb on + strand, within Psest_2264 at 2412.461 kb on - strand, within Psest_2264 at 2412.566 kb on - strand, within Psest_2264 at 2412.566 kb on - strand, within Psest_2264 at 2412.823 kb on - strand, within Psest_2264 at 2412.906 kb on + strand, within Psest_2264 at 2412.906 kb on + strand, within Psest_2264 at 2412.906 kb on + strand, within Psest_2264 at 2413.202 kb on + strand, within Psest_2264 at 2413.203 kb on - strand, within Psest_2264 at 2413.289 kb on + strand, within Psest_2264 at 2413.290 kb on - strand, within Psest_2264 at 2413.290 kb on - strand, within Psest_2264 at 2413.290 kb on - strand, within Psest_2264 at 2413.350 kb on - strand, within Psest_2264 at 2413.350 kb on - strand, within Psest_2264 at 2413.350 kb on - strand, within Psest_2264 at 2413.350 kb on - strand, within Psest_2264 at 2413.357 kb on + strand, within Psest_2264 at 2413.565 kb on + strand at 2413.566 kb on - strand at 2413.698 kb on + strand at 2413.698 kb on + strand at 2413.698 kb on + strand at 2413.698 kb on + strand at 2413.699 kb on - strand at 2414.105 kb on - strand, within Psest_2265 at 2414.126 kb on - strand, within Psest_2265 at 2414.209 kb on + strand, within Psest_2265 at 2414.441 kb on + strand, within Psest_2265 at 2414.614 kb on - strand, within Psest_2265 at 2414.614 kb on - strand, within Psest_2265
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 0.12 mM remove 2,411,254 - Psest_2263 0.69 +0.8 2,411,254 - Psest_2263 0.69 -0.0 2,411,541 + Psest_2263 0.78 -0.3 2,411,541 + Psest_2263 0.78 -0.3 2,411,541 + Psest_2263 0.78 -0.8 2,411,541 + Psest_2263 0.78 -0.4 2,411,541 + Psest_2263 0.78 +0.5 2,411,541 + Psest_2263 0.78 -1.3 2,411,541 + Psest_2263 0.78 +1.1 2,411,541 + Psest_2263 0.78 -1.4 2,411,541 + Psest_2263 0.78 -0.8 2,411,541 + Psest_2263 0.78 +1.0 2,411,542 - Psest_2263 0.78 -1.4 2,411,542 - Psest_2263 0.78 -0.6 2,411,542 - Psest_2263 0.78 -1.3 2,411,542 - Psest_2263 0.78 -2.2 2,411,542 - Psest_2263 0.78 -0.6 2,411,542 - Psest_2263 0.78 +1.0 2,411,542 - Psest_2263 0.78 +0.5 2,411,542 - Psest_2263 0.78 +0.6 2,411,668 - Psest_2263 0.82 -1.6 2,411,730 + Psest_2263 0.84 +1.2 2,411,731 - Psest_2263 0.84 -1.3 2,411,731 - Psest_2263 0.84 +2.6 2,411,731 - Psest_2263 0.84 -0.2 2,411,890 - Psest_2263 0.89 -0.2 2,411,890 - Psest_2263 0.89 +0.5 2,411,917 - +0.8 2,411,942 + +2.6 2,411,943 - +1.0 2,411,943 - +0.6 2,411,946 + -0.0 2,411,946 + -0.5 2,411,946 + -0.1 2,411,946 + -0.4 2,411,946 + -0.8 2,411,947 - +0.4 2,411,947 - -0.6 2,411,947 - -0.8 2,411,947 - -1.6 2,411,947 - +0.9 2,412,378 + Psest_2264 0.10 -0.3 2,412,379 - Psest_2264 0.10 -0.6 2,412,379 - Psest_2264 0.10 -1.3 2,412,379 - Psest_2264 0.10 -1.0 2,412,460 + Psest_2264 0.16 -0.0 2,412,461 - Psest_2264 0.16 -1.0 2,412,566 - Psest_2264 0.23 -0.1 2,412,566 - Psest_2264 0.23 -0.6 2,412,823 - Psest_2264 0.40 -0.5 2,412,906 + Psest_2264 0.46 +1.7 2,412,906 + Psest_2264 0.46 -0.6 2,412,906 + Psest_2264 0.46 -2.0 2,413,202 + Psest_2264 0.66 -0.9 2,413,203 - Psest_2264 0.66 -0.4 2,413,289 + Psest_2264 0.72 +0.5 2,413,290 - Psest_2264 0.72 -0.3 2,413,290 - Psest_2264 0.72 -1.2 2,413,290 - Psest_2264 0.72 +0.2 2,413,350 - Psest_2264 0.76 -1.3 2,413,350 - Psest_2264 0.76 -1.3 2,413,350 - Psest_2264 0.76 -1.0 2,413,350 - Psest_2264 0.76 +0.3 2,413,357 + Psest_2264 0.76 -0.6 2,413,565 + +1.2 2,413,566 - -0.8 2,413,698 + -1.1 2,413,698 + -0.1 2,413,698 + -0.7 2,413,698 + -1.3 2,413,699 - -0.3 2,414,105 - Psest_2265 0.32 -0.5 2,414,126 - Psest_2265 0.33 -0.7 2,414,209 + Psest_2265 0.40 +0.2 2,414,441 + Psest_2265 0.59 -0.0 2,414,614 - Psest_2265 0.72 -0.6 2,414,614 - Psest_2265 0.72 +1.6
Or see this region's nucleotide sequence