Experiment: Zinc 0.12 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2162 and Psest_2163 are separated by 383 nucleotides Psest_2163 and Psest_2164 are separated by 102 nucleotides Psest_2164 and Psest_2165 are separated by 27 nucleotides
Psest_2162: Psest_2162 - Uncharacterized conserved protein, at 2,314,412 to 2,315,329
_2162
Psest_2163: Psest_2163 - Transcriptional regulator, at 2,315,713 to 2,316,633
_2163
Psest_2164: Psest_2164 - Uncharacterized conserved protein, at 2,316,736 to 2,317,560
_2164
Psest_2165: Psest_2165 - Cytochrome B561, at 2,317,588 to 2,318,427
_2165
Position (kb)
2315
2316
2317 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2314.776 kb on + strand, within Psest_2162 at 2314.776 kb on + strand, within Psest_2162 at 2314.776 kb on + strand, within Psest_2162 at 2314.777 kb on - strand, within Psest_2162 at 2314.777 kb on - strand, within Psest_2162 at 2314.777 kb on - strand, within Psest_2162 at 2314.777 kb on - strand, within Psest_2162 at 2314.777 kb on - strand, within Psest_2162 at 2314.780 kb on + strand, within Psest_2162 at 2314.781 kb on - strand, within Psest_2162 at 2314.781 kb on - strand, within Psest_2162 at 2314.872 kb on + strand, within Psest_2162 at 2314.873 kb on - strand, within Psest_2162 at 2314.873 kb on - strand, within Psest_2162 at 2314.949 kb on + strand, within Psest_2162 at 2314.949 kb on + strand, within Psest_2162 at 2314.950 kb on - strand, within Psest_2162 at 2315.187 kb on + strand, within Psest_2162 at 2315.187 kb on + strand, within Psest_2162 at 2315.187 kb on + strand, within Psest_2162 at 2315.268 kb on + strand at 2315.268 kb on + strand at 2315.308 kb on + strand at 2315.308 kb on + strand at 2315.412 kb on - strand at 2315.412 kb on - strand at 2315.445 kb on + strand at 2315.445 kb on + strand at 2315.445 kb on + strand at 2315.445 kb on + strand at 2315.445 kb on + strand at 2315.445 kb on + strand at 2315.445 kb on + strand at 2315.446 kb on - strand at 2315.446 kb on - strand at 2315.446 kb on - strand at 2315.446 kb on - strand at 2315.446 kb on - strand at 2315.446 kb on - strand at 2315.446 kb on - strand at 2315.446 kb on - strand at 2315.446 kb on - strand at 2315.446 kb on - strand at 2315.537 kb on + strand at 2315.538 kb on - strand at 2315.555 kb on + strand at 2315.556 kb on - strand at 2315.556 kb on - strand at 2315.556 kb on - strand at 2315.765 kb on + strand at 2315.765 kb on + strand at 2315.915 kb on + strand, within Psest_2163 at 2315.916 kb on - strand, within Psest_2163 at 2315.916 kb on - strand, within Psest_2163 at 2315.916 kb on - strand, within Psest_2163 at 2316.211 kb on - strand, within Psest_2163 at 2316.249 kb on + strand, within Psest_2163 at 2316.249 kb on + strand, within Psest_2163 at 2316.268 kb on + strand, within Psest_2163 at 2316.437 kb on + strand, within Psest_2163 at 2316.437 kb on + strand, within Psest_2163 at 2316.438 kb on - strand, within Psest_2163 at 2316.711 kb on + strand at 2316.712 kb on - strand at 2316.973 kb on + strand, within Psest_2164 at 2316.973 kb on + strand, within Psest_2164 at 2316.973 kb on + strand, within Psest_2164 at 2316.974 kb on - strand, within Psest_2164 at 2316.974 kb on - strand, within Psest_2164 at 2316.974 kb on - strand, within Psest_2164 at 2316.974 kb on - strand, within Psest_2164 at 2316.974 kb on - strand, within Psest_2164 at 2316.999 kb on + strand, within Psest_2164 at 2316.999 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.004 kb on - strand, within Psest_2164 at 2317.004 kb on - strand, within Psest_2164 at 2317.004 kb on - strand, within Psest_2164 at 2317.591 kb on + strand at 2317.591 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 0.12 mM remove 2,314,776 + Psest_2162 0.40 -0.4 2,314,776 + Psest_2162 0.40 -1.1 2,314,776 + Psest_2162 0.40 -1.0 2,314,777 - Psest_2162 0.40 -0.3 2,314,777 - Psest_2162 0.40 +1.4 2,314,777 - Psest_2162 0.40 -0.9 2,314,777 - Psest_2162 0.40 +1.4 2,314,777 - Psest_2162 0.40 -0.2 2,314,780 + Psest_2162 0.40 +0.6 2,314,781 - Psest_2162 0.40 +0.7 2,314,781 - Psest_2162 0.40 +0.5 2,314,872 + Psest_2162 0.50 -1.3 2,314,873 - Psest_2162 0.50 +0.5 2,314,873 - Psest_2162 0.50 +0.4 2,314,949 + Psest_2162 0.58 -1.5 2,314,949 + Psest_2162 0.58 +0.9 2,314,950 - Psest_2162 0.59 -2.0 2,315,187 + Psest_2162 0.84 -0.3 2,315,187 + Psest_2162 0.84 -1.2 2,315,187 + Psest_2162 0.84 -1.0 2,315,268 + +0.3 2,315,268 + -1.6 2,315,308 + +1.0 2,315,308 + -0.1 2,315,412 - +2.6 2,315,412 - -0.3 2,315,445 + +0.2 2,315,445 + -0.7 2,315,445 + -1.7 2,315,445 + +0.4 2,315,445 + +2.3 2,315,445 + +1.6 2,315,445 + +0.2 2,315,446 - -0.8 2,315,446 - -1.9 2,315,446 - -1.4 2,315,446 - -0.7 2,315,446 - +0.1 2,315,446 - -2.0 2,315,446 - +0.3 2,315,446 - -1.0 2,315,446 - -0.1 2,315,446 - +0.2 2,315,537 + -0.3 2,315,538 - +0.5 2,315,555 + -0.7 2,315,556 - +2.5 2,315,556 - +0.4 2,315,556 - +1.0 2,315,765 + -0.3 2,315,765 + -2.6 2,315,915 + Psest_2163 0.22 +0.2 2,315,916 - Psest_2163 0.22 +0.3 2,315,916 - Psest_2163 0.22 +1.1 2,315,916 - Psest_2163 0.22 +0.5 2,316,211 - Psest_2163 0.54 +1.8 2,316,249 + Psest_2163 0.58 +2.1 2,316,249 + Psest_2163 0.58 -0.1 2,316,268 + Psest_2163 0.60 +0.1 2,316,437 + Psest_2163 0.79 -0.7 2,316,437 + Psest_2163 0.79 +1.5 2,316,438 - Psest_2163 0.79 +0.5 2,316,711 + -0.3 2,316,712 - -0.9 2,316,973 + Psest_2164 0.29 +0.3 2,316,973 + Psest_2164 0.29 -0.2 2,316,973 + Psest_2164 0.29 -1.6 2,316,974 - Psest_2164 0.29 +0.6 2,316,974 - Psest_2164 0.29 -0.7 2,316,974 - Psest_2164 0.29 -2.1 2,316,974 - Psest_2164 0.29 +0.7 2,316,974 - Psest_2164 0.29 -0.7 2,316,999 + Psest_2164 0.32 +1.4 2,316,999 + Psest_2164 0.32 -0.7 2,317,003 + Psest_2164 0.32 +0.8 2,317,003 + Psest_2164 0.32 -1.0 2,317,003 + Psest_2164 0.32 -1.8 2,317,003 + Psest_2164 0.32 -0.9 2,317,003 + Psest_2164 0.32 -0.4 2,317,003 + Psest_2164 0.32 -1.2 2,317,003 + Psest_2164 0.32 -0.7 2,317,003 + Psest_2164 0.32 -0.6 2,317,003 + Psest_2164 0.32 -0.8 2,317,004 - Psest_2164 0.32 +0.5 2,317,004 - Psest_2164 0.32 +0.1 2,317,004 - Psest_2164 0.32 -0.4 2,317,591 + -0.3 2,317,591 + +0.3
Or see this region's nucleotide sequence