Experiment: Zinc 0.12 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2143 and Psest_2144 overlap by 4 nucleotides Psest_2144 and Psest_2145 are separated by 99 nucleotides
Psest_2143: Psest_2143 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 2,285,631 to 2,287,079
_2143
Psest_2144: Psest_2144 - The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family, at 2,287,076 to 2,290,246
_2144
Psest_2145: Psest_2145 - RND family efflux transporter, MFP subunit, at 2,290,346 to 2,291,575
_2145
Position (kb)
2287
2288
2289
2290
2291 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2286.853 kb on + strand, within Psest_2143 at 2286.854 kb on - strand, within Psest_2143 at 2286.962 kb on - strand at 2287.096 kb on - strand at 2287.096 kb on - strand at 2287.096 kb on - strand at 2287.146 kb on + strand at 2287.545 kb on + strand, within Psest_2144 at 2287.545 kb on + strand, within Psest_2144 at 2287.546 kb on - strand, within Psest_2144 at 2287.630 kb on - strand, within Psest_2144 at 2287.719 kb on + strand, within Psest_2144 at 2287.767 kb on + strand, within Psest_2144 at 2287.767 kb on + strand, within Psest_2144 at 2287.768 kb on - strand, within Psest_2144 at 2287.918 kb on - strand, within Psest_2144 at 2287.918 kb on - strand, within Psest_2144 at 2287.918 kb on - strand, within Psest_2144 at 2287.950 kb on + strand, within Psest_2144 at 2287.965 kb on + strand, within Psest_2144 at 2288.064 kb on + strand, within Psest_2144 at 2288.509 kb on - strand, within Psest_2144 at 2288.509 kb on - strand, within Psest_2144 at 2288.509 kb on - strand, within Psest_2144 at 2288.562 kb on + strand, within Psest_2144 at 2288.562 kb on + strand, within Psest_2144 at 2288.586 kb on + strand, within Psest_2144 at 2288.586 kb on + strand, within Psest_2144 at 2288.586 kb on + strand, within Psest_2144 at 2288.587 kb on - strand, within Psest_2144 at 2288.587 kb on - strand, within Psest_2144 at 2288.587 kb on - strand, within Psest_2144 at 2288.587 kb on - strand, within Psest_2144 at 2289.185 kb on + strand, within Psest_2144 at 2289.211 kb on + strand, within Psest_2144 at 2289.211 kb on + strand, within Psest_2144 at 2289.211 kb on + strand, within Psest_2144 at 2289.211 kb on + strand, within Psest_2144 at 2289.211 kb on + strand, within Psest_2144 at 2289.211 kb on + strand, within Psest_2144 at 2289.211 kb on + strand, within Psest_2144 at 2289.211 kb on + strand, within Psest_2144 at 2289.211 kb on + strand, within Psest_2144 at 2289.211 kb on + strand, within Psest_2144 at 2289.211 kb on + strand, within Psest_2144 at 2289.211 kb on + strand, within Psest_2144 at 2289.211 kb on + strand, within Psest_2144 at 2289.211 kb on + strand, within Psest_2144 at 2289.211 kb on + strand, within Psest_2144 at 2289.211 kb on + strand, within Psest_2144 at 2289.212 kb on - strand, within Psest_2144 at 2289.212 kb on - strand, within Psest_2144 at 2289.212 kb on - strand, within Psest_2144 at 2289.212 kb on - strand, within Psest_2144 at 2289.212 kb on - strand, within Psest_2144 at 2289.212 kb on - strand, within Psest_2144 at 2289.212 kb on - strand, within Psest_2144 at 2289.212 kb on - strand, within Psest_2144 at 2289.212 kb on - strand, within Psest_2144 at 2289.212 kb on - strand, within Psest_2144 at 2289.212 kb on - strand, within Psest_2144 at 2289.212 kb on - strand, within Psest_2144 at 2289.215 kb on + strand, within Psest_2144 at 2289.215 kb on + strand, within Psest_2144 at 2289.215 kb on + strand, within Psest_2144 at 2289.216 kb on - strand, within Psest_2144 at 2289.216 kb on - strand, within Psest_2144 at 2289.216 kb on - strand, within Psest_2144 at 2289.216 kb on - strand, within Psest_2144 at 2289.216 kb on - strand, within Psest_2144 at 2289.259 kb on - strand, within Psest_2144 at 2289.270 kb on + strand, within Psest_2144 at 2289.270 kb on + strand, within Psest_2144 at 2289.772 kb on - strand, within Psest_2144 at 2289.783 kb on + strand, within Psest_2144 at 2289.783 kb on + strand, within Psest_2144 at 2289.784 kb on - strand, within Psest_2144 at 2289.784 kb on - strand, within Psest_2144 at 2289.784 kb on - strand, within Psest_2144 at 2289.784 kb on - strand, within Psest_2144 at 2290.011 kb on + strand at 2290.011 kb on + strand at 2290.011 kb on + strand at 2290.011 kb on + strand at 2290.011 kb on + strand at 2290.011 kb on + strand at 2290.011 kb on + strand at 2290.011 kb on + strand at 2290.011 kb on + strand at 2290.011 kb on + strand at 2290.012 kb on - strand at 2290.012 kb on - strand at 2290.012 kb on - strand at 2290.012 kb on - strand at 2290.012 kb on - strand at 2290.012 kb on - strand at 2290.343 kb on + strand at 2290.343 kb on + strand at 2290.347 kb on + strand at 2290.347 kb on + strand at 2290.347 kb on + strand at 2290.348 kb on - strand at 2290.348 kb on - strand at 2290.348 kb on - strand at 2290.683 kb on + strand, within Psest_2145 at 2290.683 kb on + strand, within Psest_2145 at 2290.684 kb on - strand, within Psest_2145 at 2290.858 kb on - strand, within Psest_2145 at 2290.905 kb on + strand, within Psest_2145 at 2290.905 kb on + strand, within Psest_2145 at 2290.906 kb on - strand, within Psest_2145 at 2290.914 kb on + strand, within Psest_2145 at 2290.914 kb on + strand, within Psest_2145 at 2290.914 kb on + strand, within Psest_2145 at 2290.914 kb on + strand, within Psest_2145 at 2290.915 kb on - strand, within Psest_2145 at 2290.938 kb on + strand, within Psest_2145 at 2290.938 kb on + strand, within Psest_2145 at 2290.938 kb on + strand, within Psest_2145 at 2290.939 kb on - strand, within Psest_2145 at 2290.939 kb on - strand, within Psest_2145 at 2290.944 kb on + strand, within Psest_2145 at 2290.944 kb on + strand, within Psest_2145 at 2290.944 kb on + strand, within Psest_2145 at 2290.944 kb on + strand, within Psest_2145 at 2290.945 kb on - strand, within Psest_2145 at 2290.945 kb on - strand, within Psest_2145 at 2290.945 kb on - strand, within Psest_2145 at 2290.945 kb on - strand, within Psest_2145 at 2290.945 kb on - strand, within Psest_2145
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 0.12 mM remove 2,286,853 + Psest_2143 0.84 -1.5 2,286,854 - Psest_2143 0.84 +0.0 2,286,962 - -0.4 2,287,096 - -1.1 2,287,096 - +0.1 2,287,096 - +0.7 2,287,146 + -1.6 2,287,545 + Psest_2144 0.15 -0.8 2,287,545 + Psest_2144 0.15 -0.3 2,287,546 - Psest_2144 0.15 -1.9 2,287,630 - Psest_2144 0.17 +0.1 2,287,719 + Psest_2144 0.20 +0.6 2,287,767 + Psest_2144 0.22 -1.0 2,287,767 + Psest_2144 0.22 -1.1 2,287,768 - Psest_2144 0.22 +1.2 2,287,918 - Psest_2144 0.27 -2.4 2,287,918 - Psest_2144 0.27 +0.7 2,287,918 - Psest_2144 0.27 -0.5 2,287,950 + Psest_2144 0.28 +1.5 2,287,965 + Psest_2144 0.28 -0.3 2,288,064 + Psest_2144 0.31 -0.5 2,288,509 - Psest_2144 0.45 +0.3 2,288,509 - Psest_2144 0.45 -0.2 2,288,509 - Psest_2144 0.45 +0.4 2,288,562 + Psest_2144 0.47 -0.1 2,288,562 + Psest_2144 0.47 +1.6 2,288,586 + Psest_2144 0.48 +0.2 2,288,586 + Psest_2144 0.48 +0.7 2,288,586 + Psest_2144 0.48 -0.8 2,288,587 - Psest_2144 0.48 +1.0 2,288,587 - Psest_2144 0.48 -0.7 2,288,587 - Psest_2144 0.48 +0.9 2,288,587 - Psest_2144 0.48 +1.2 2,289,185 + Psest_2144 0.67 +0.0 2,289,211 + Psest_2144 0.67 -0.5 2,289,211 + Psest_2144 0.67 -1.5 2,289,211 + Psest_2144 0.67 +1.1 2,289,211 + Psest_2144 0.67 +1.0 2,289,211 + Psest_2144 0.67 +0.8 2,289,211 + Psest_2144 0.67 -0.4 2,289,211 + Psest_2144 0.67 +0.3 2,289,211 + Psest_2144 0.67 +0.8 2,289,211 + Psest_2144 0.67 +0.1 2,289,211 + Psest_2144 0.67 +0.8 2,289,211 + Psest_2144 0.67 +0.1 2,289,211 + Psest_2144 0.67 +0.0 2,289,211 + Psest_2144 0.67 -0.5 2,289,211 + Psest_2144 0.67 +0.3 2,289,211 + Psest_2144 0.67 +0.0 2,289,211 + Psest_2144 0.67 +1.0 2,289,212 - Psest_2144 0.67 +0.8 2,289,212 - Psest_2144 0.67 -0.9 2,289,212 - Psest_2144 0.67 -0.9 2,289,212 - Psest_2144 0.67 +0.4 2,289,212 - Psest_2144 0.67 -1.1 2,289,212 - Psest_2144 0.67 -0.9 2,289,212 - Psest_2144 0.67 +0.6 2,289,212 - Psest_2144 0.67 -1.8 2,289,212 - Psest_2144 0.67 -1.1 2,289,212 - Psest_2144 0.67 +0.2 2,289,212 - Psest_2144 0.67 +0.5 2,289,212 - Psest_2144 0.67 +1.4 2,289,215 + Psest_2144 0.67 -2.4 2,289,215 + Psest_2144 0.67 +0.6 2,289,215 + Psest_2144 0.67 -0.5 2,289,216 - Psest_2144 0.67 +0.5 2,289,216 - Psest_2144 0.67 -2.0 2,289,216 - Psest_2144 0.67 +0.2 2,289,216 - Psest_2144 0.67 -0.4 2,289,216 - Psest_2144 0.67 +0.2 2,289,259 - Psest_2144 0.69 -0.2 2,289,270 + Psest_2144 0.69 -0.9 2,289,270 + Psest_2144 0.69 +0.9 2,289,772 - Psest_2144 0.85 -1.6 2,289,783 + Psest_2144 0.85 +1.2 2,289,783 + Psest_2144 0.85 +0.2 2,289,784 - Psest_2144 0.85 -0.9 2,289,784 - Psest_2144 0.85 +0.1 2,289,784 - Psest_2144 0.85 +1.4 2,289,784 - Psest_2144 0.85 +0.4 2,290,011 + -0.4 2,290,011 + -0.3 2,290,011 + -0.9 2,290,011 + -0.3 2,290,011 + +0.3 2,290,011 + -1.2 2,290,011 + +0.2 2,290,011 + +1.6 2,290,011 + -1.1 2,290,011 + +0.5 2,290,012 - -0.5 2,290,012 - -1.6 2,290,012 - +2.0 2,290,012 - -1.2 2,290,012 - +0.1 2,290,012 - -0.5 2,290,343 + -0.1 2,290,343 + -1.5 2,290,347 + -1.9 2,290,347 + +0.4 2,290,347 + +2.6 2,290,348 - -1.5 2,290,348 - -1.1 2,290,348 - +1.0 2,290,683 + Psest_2145 0.27 -1.0 2,290,683 + Psest_2145 0.27 +0.2 2,290,684 - Psest_2145 0.27 -0.5 2,290,858 - Psest_2145 0.42 +0.8 2,290,905 + Psest_2145 0.45 -1.7 2,290,905 + Psest_2145 0.45 -0.2 2,290,906 - Psest_2145 0.46 +0.7 2,290,914 + Psest_2145 0.46 -2.1 2,290,914 + Psest_2145 0.46 +1.2 2,290,914 + Psest_2145 0.46 +0.3 2,290,914 + Psest_2145 0.46 +1.5 2,290,915 - Psest_2145 0.46 -2.7 2,290,938 + Psest_2145 0.48 +0.1 2,290,938 + Psest_2145 0.48 +2.1 2,290,938 + Psest_2145 0.48 +1.8 2,290,939 - Psest_2145 0.48 -0.4 2,290,939 - Psest_2145 0.48 +1.0 2,290,944 + Psest_2145 0.49 +0.2 2,290,944 + Psest_2145 0.49 +0.1 2,290,944 + Psest_2145 0.49 -0.4 2,290,944 + Psest_2145 0.49 +0.1 2,290,945 - Psest_2145 0.49 -0.1 2,290,945 - Psest_2145 0.49 +1.1 2,290,945 - Psest_2145 0.49 +0.2 2,290,945 - Psest_2145 0.49 -1.2 2,290,945 - Psest_2145 0.49 +0.8
Or see this region's nucleotide sequence