Experiment: Zinc 0.12 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1581 and Psest_1582 are separated by 131 nucleotides Psest_1582 and Psest_1583 are separated by 97 nucleotides Psest_1583 and Psest_1584 are separated by 163 nucleotides
Psest_1581: Psest_1581 - Acetyltransferases, at 1,685,891 to 1,686,391
_1581
Psest_1582: Psest_1582 - Protein of unknown function (DUF3087)., at 1,686,523 to 1,687,062
_1582
Psest_1583: Psest_1583 - outer membrane porin, OprD family., at 1,687,160 to 1,688,410
_1583
Psest_1584: Psest_1584 - Arabinose efflux permease, at 1,688,574 to 1,689,932
_1584
Position (kb)
1687
1688
1689 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1686.207 kb on + strand, within Psest_1581 at 1686.207 kb on + strand, within Psest_1581 at 1686.208 kb on - strand, within Psest_1581 at 1686.208 kb on - strand, within Psest_1581 at 1686.208 kb on - strand, within Psest_1581 at 1686.243 kb on + strand, within Psest_1581 at 1686.243 kb on + strand, within Psest_1581 at 1686.243 kb on + strand, within Psest_1581 at 1686.243 kb on + strand, within Psest_1581 at 1686.244 kb on - strand, within Psest_1581 at 1686.244 kb on - strand, within Psest_1581 at 1686.244 kb on - strand, within Psest_1581 at 1686.244 kb on - strand, within Psest_1581 at 1686.244 kb on - strand, within Psest_1581 at 1686.244 kb on - strand, within Psest_1581 at 1686.342 kb on + strand at 1686.342 kb on + strand at 1686.342 kb on + strand at 1686.342 kb on + strand at 1686.342 kb on + strand at 1686.342 kb on + strand at 1686.342 kb on + strand at 1686.342 kb on + strand at 1686.342 kb on + strand at 1686.342 kb on + strand at 1686.342 kb on + strand at 1686.342 kb on + strand at 1686.342 kb on + strand at 1686.342 kb on + strand at 1686.342 kb on + strand at 1686.342 kb on + strand at 1686.343 kb on - strand at 1686.343 kb on - strand at 1686.343 kb on - strand at 1686.343 kb on - strand at 1686.343 kb on - strand at 1686.343 kb on - strand at 1686.343 kb on - strand at 1686.343 kb on - strand at 1686.343 kb on - strand at 1686.343 kb on - strand at 1686.775 kb on + strand, within Psest_1582 at 1686.776 kb on - strand, within Psest_1582 at 1686.883 kb on + strand, within Psest_1582 at 1686.884 kb on - strand, within Psest_1582 at 1686.884 kb on - strand, within Psest_1582 at 1687.179 kb on + strand at 1687.179 kb on + strand at 1687.180 kb on - strand at 1687.180 kb on - strand at 1687.180 kb on - strand at 1687.180 kb on - strand at 1687.180 kb on - strand at 1687.180 kb on - strand at 1687.293 kb on + strand, within Psest_1583 at 1687.293 kb on + strand, within Psest_1583 at 1687.293 kb on + strand, within Psest_1583 at 1687.293 kb on + strand, within Psest_1583 at 1687.293 kb on + strand, within Psest_1583 at 1687.293 kb on + strand, within Psest_1583 at 1687.293 kb on + strand, within Psest_1583 at 1687.293 kb on + strand, within Psest_1583 at 1687.293 kb on + strand, within Psest_1583 at 1687.293 kb on + strand, within Psest_1583 at 1687.293 kb on + strand, within Psest_1583 at 1687.294 kb on - strand, within Psest_1583 at 1687.294 kb on - strand, within Psest_1583 at 1687.294 kb on - strand, within Psest_1583 at 1687.294 kb on - strand, within Psest_1583 at 1687.294 kb on - strand, within Psest_1583 at 1687.294 kb on - strand, within Psest_1583 at 1687.294 kb on - strand, within Psest_1583 at 1687.294 kb on - strand, within Psest_1583 at 1687.294 kb on - strand, within Psest_1583 at 1687.294 kb on - strand, within Psest_1583 at 1687.294 kb on - strand, within Psest_1583 at 1687.294 kb on - strand, within Psest_1583 at 1687.294 kb on - strand, within Psest_1583 at 1687.294 kb on - strand, within Psest_1583 at 1687.294 kb on - strand, within Psest_1583 at 1687.294 kb on - strand, within Psest_1583 at 1687.416 kb on + strand, within Psest_1583 at 1687.422 kb on + strand, within Psest_1583 at 1687.489 kb on - strand, within Psest_1583 at 1687.489 kb on - strand, within Psest_1583 at 1687.489 kb on - strand, within Psest_1583 at 1687.489 kb on - strand, within Psest_1583 at 1687.489 kb on - strand, within Psest_1583 at 1687.650 kb on + strand, within Psest_1583 at 1687.650 kb on + strand, within Psest_1583 at 1687.650 kb on + strand, within Psest_1583 at 1687.693 kb on + strand, within Psest_1583 at 1687.693 kb on + strand, within Psest_1583 at 1687.693 kb on + strand, within Psest_1583 at 1687.693 kb on + strand, within Psest_1583 at 1687.693 kb on + strand, within Psest_1583 at 1687.693 kb on + strand, within Psest_1583 at 1687.693 kb on + strand, within Psest_1583 at 1687.694 kb on - strand, within Psest_1583 at 1687.694 kb on - strand, within Psest_1583 at 1687.694 kb on - strand, within Psest_1583 at 1687.694 kb on - strand, within Psest_1583 at 1687.694 kb on - strand, within Psest_1583 at 1687.694 kb on - strand, within Psest_1583 at 1687.694 kb on - strand, within Psest_1583 at 1687.696 kb on + strand, within Psest_1583 at 1687.696 kb on + strand, within Psest_1583 at 1687.726 kb on - strand, within Psest_1583 at 1687.729 kb on + strand, within Psest_1583 at 1687.729 kb on + strand, within Psest_1583 at 1687.729 kb on + strand, within Psest_1583 at 1687.730 kb on - strand, within Psest_1583 at 1687.730 kb on - strand, within Psest_1583 at 1687.749 kb on + strand, within Psest_1583 at 1687.749 kb on + strand, within Psest_1583 at 1687.752 kb on + strand, within Psest_1583 at 1687.752 kb on + strand, within Psest_1583 at 1687.753 kb on - strand, within Psest_1583 at 1687.753 kb on - strand, within Psest_1583 at 1687.753 kb on - strand, within Psest_1583 at 1687.753 kb on - strand, within Psest_1583 at 1687.753 kb on - strand, within Psest_1583 at 1688.055 kb on + strand, within Psest_1583 at 1688.056 kb on - strand, within Psest_1583 at 1688.277 kb on + strand, within Psest_1583 at 1688.277 kb on + strand, within Psest_1583 at 1688.281 kb on - strand, within Psest_1583 at 1688.281 kb on - strand, within Psest_1583 at 1688.281 kb on - strand, within Psest_1583 at 1688.417 kb on + strand at 1688.417 kb on + strand at 1688.731 kb on + strand, within Psest_1584 at 1688.731 kb on + strand, within Psest_1584 at 1688.732 kb on - strand, within Psest_1584 at 1688.732 kb on - strand, within Psest_1584 at 1688.732 kb on - strand, within Psest_1584 at 1688.732 kb on - strand, within Psest_1584 at 1688.732 kb on - strand, within Psest_1584 at 1688.732 kb on - strand, within Psest_1584 at 1688.732 kb on - strand, within Psest_1584 at 1688.732 kb on - strand, within Psest_1584 at 1688.824 kb on + strand, within Psest_1584 at 1688.919 kb on + strand, within Psest_1584 at 1688.919 kb on + strand, within Psest_1584 at 1688.919 kb on + strand, within Psest_1584 at 1688.919 kb on + strand, within Psest_1584 at 1688.920 kb on - strand, within Psest_1584 at 1689.164 kb on - strand, within Psest_1584 at 1689.164 kb on - strand, within Psest_1584 at 1689.178 kb on + strand, within Psest_1584 at 1689.178 kb on + strand, within Psest_1584 at 1689.178 kb on + strand, within Psest_1584 at 1689.179 kb on - strand, within Psest_1584 at 1689.179 kb on - strand, within Psest_1584 at 1689.179 kb on - strand, within Psest_1584 at 1689.179 kb on - strand, within Psest_1584
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 0.12 mM remove 1,686,207 + Psest_1581 0.63 -1.9 1,686,207 + Psest_1581 0.63 +0.8 1,686,208 - Psest_1581 0.63 +0.2 1,686,208 - Psest_1581 0.63 -0.3 1,686,208 - Psest_1581 0.63 -0.4 1,686,243 + Psest_1581 0.70 +0.6 1,686,243 + Psest_1581 0.70 -0.7 1,686,243 + Psest_1581 0.70 -0.6 1,686,243 + Psest_1581 0.70 -0.2 1,686,244 - Psest_1581 0.70 -1.3 1,686,244 - Psest_1581 0.70 -1.4 1,686,244 - Psest_1581 0.70 +0.6 1,686,244 - Psest_1581 0.70 -1.3 1,686,244 - Psest_1581 0.70 -0.6 1,686,244 - Psest_1581 0.70 -0.3 1,686,342 + +0.5 1,686,342 + -0.6 1,686,342 + -0.5 1,686,342 + +0.1 1,686,342 + -0.4 1,686,342 + -0.5 1,686,342 + -2.2 1,686,342 + -1.3 1,686,342 + -0.9 1,686,342 + +0.1 1,686,342 + -0.5 1,686,342 + -1.9 1,686,342 + +1.6 1,686,342 + -0.2 1,686,342 + -1.0 1,686,342 + -0.1 1,686,343 - -0.2 1,686,343 - +0.8 1,686,343 - +0.6 1,686,343 - +1.0 1,686,343 - +0.7 1,686,343 - -1.0 1,686,343 - +0.6 1,686,343 - -0.1 1,686,343 - -0.7 1,686,343 - +1.1 1,686,775 + Psest_1582 0.47 -1.1 1,686,776 - Psest_1582 0.47 -1.3 1,686,883 + Psest_1582 0.67 +0.3 1,686,884 - Psest_1582 0.67 +0.3 1,686,884 - Psest_1582 0.67 -0.7 1,687,179 + +0.7 1,687,179 + -0.7 1,687,180 - -0.4 1,687,180 - -0.8 1,687,180 - -0.4 1,687,180 - -0.8 1,687,180 - -0.3 1,687,180 - -0.2 1,687,293 + Psest_1583 0.11 -0.9 1,687,293 + Psest_1583 0.11 -0.3 1,687,293 + Psest_1583 0.11 -0.3 1,687,293 + Psest_1583 0.11 -1.0 1,687,293 + Psest_1583 0.11 -2.0 1,687,293 + Psest_1583 0.11 -0.8 1,687,293 + Psest_1583 0.11 -0.5 1,687,293 + Psest_1583 0.11 +1.1 1,687,293 + Psest_1583 0.11 -0.8 1,687,293 + Psest_1583 0.11 -0.3 1,687,293 + Psest_1583 0.11 -0.6 1,687,294 - Psest_1583 0.11 -1.9 1,687,294 - Psest_1583 0.11 +0.0 1,687,294 - Psest_1583 0.11 +0.9 1,687,294 - Psest_1583 0.11 -0.4 1,687,294 - Psest_1583 0.11 +2.5 1,687,294 - Psest_1583 0.11 +0.4 1,687,294 - Psest_1583 0.11 +0.1 1,687,294 - Psest_1583 0.11 +1.1 1,687,294 - Psest_1583 0.11 -1.0 1,687,294 - Psest_1583 0.11 +0.9 1,687,294 - Psest_1583 0.11 +0.3 1,687,294 - Psest_1583 0.11 +0.1 1,687,294 - Psest_1583 0.11 +1.3 1,687,294 - Psest_1583 0.11 +1.7 1,687,294 - Psest_1583 0.11 +0.6 1,687,294 - Psest_1583 0.11 -1.9 1,687,416 + Psest_1583 0.20 +0.4 1,687,422 + Psest_1583 0.21 +0.4 1,687,489 - Psest_1583 0.26 -0.8 1,687,489 - Psest_1583 0.26 -0.7 1,687,489 - Psest_1583 0.26 +1.6 1,687,489 - Psest_1583 0.26 +0.1 1,687,489 - Psest_1583 0.26 +0.6 1,687,650 + Psest_1583 0.39 -1.7 1,687,650 + Psest_1583 0.39 -0.9 1,687,650 + Psest_1583 0.39 -0.7 1,687,693 + Psest_1583 0.43 -1.1 1,687,693 + Psest_1583 0.43 +0.1 1,687,693 + Psest_1583 0.43 -0.5 1,687,693 + Psest_1583 0.43 -1.6 1,687,693 + Psest_1583 0.43 -0.4 1,687,693 + Psest_1583 0.43 +0.9 1,687,693 + Psest_1583 0.43 +1.8 1,687,694 - Psest_1583 0.43 -0.3 1,687,694 - Psest_1583 0.43 +0.3 1,687,694 - Psest_1583 0.43 -0.4 1,687,694 - Psest_1583 0.43 +0.2 1,687,694 - Psest_1583 0.43 -0.6 1,687,694 - Psest_1583 0.43 -1.2 1,687,694 - Psest_1583 0.43 -0.2 1,687,696 + Psest_1583 0.43 -0.5 1,687,696 + Psest_1583 0.43 -1.0 1,687,726 - Psest_1583 0.45 -0.6 1,687,729 + Psest_1583 0.45 -0.7 1,687,729 + Psest_1583 0.45 +0.1 1,687,729 + Psest_1583 0.45 -1.7 1,687,730 - Psest_1583 0.46 -0.4 1,687,730 - Psest_1583 0.46 -2.4 1,687,749 + Psest_1583 0.47 -0.2 1,687,749 + Psest_1583 0.47 -1.9 1,687,752 + Psest_1583 0.47 +0.2 1,687,752 + Psest_1583 0.47 -0.3 1,687,753 - Psest_1583 0.47 +0.6 1,687,753 - Psest_1583 0.47 -1.3 1,687,753 - Psest_1583 0.47 +1.0 1,687,753 - Psest_1583 0.47 -0.7 1,687,753 - Psest_1583 0.47 -0.1 1,688,055 + Psest_1583 0.72 -0.1 1,688,056 - Psest_1583 0.72 +1.1 1,688,277 + Psest_1583 0.89 -0.4 1,688,277 + Psest_1583 0.89 -1.1 1,688,281 - Psest_1583 0.90 -0.9 1,688,281 - Psest_1583 0.90 +0.5 1,688,281 - Psest_1583 0.90 +0.3 1,688,417 + +1.4 1,688,417 + +0.6 1,688,731 + Psest_1584 0.12 -0.0 1,688,731 + Psest_1584 0.12 -0.4 1,688,732 - Psest_1584 0.12 -0.5 1,688,732 - Psest_1584 0.12 -1.9 1,688,732 - Psest_1584 0.12 +2.1 1,688,732 - Psest_1584 0.12 -0.2 1,688,732 - Psest_1584 0.12 +0.6 1,688,732 - Psest_1584 0.12 -0.3 1,688,732 - Psest_1584 0.12 -0.4 1,688,732 - Psest_1584 0.12 -0.3 1,688,824 + Psest_1584 0.18 -1.9 1,688,919 + Psest_1584 0.25 -0.6 1,688,919 + Psest_1584 0.25 +0.7 1,688,919 + Psest_1584 0.25 +0.5 1,688,919 + Psest_1584 0.25 +0.6 1,688,920 - Psest_1584 0.25 -2.0 1,689,164 - Psest_1584 0.43 -0.0 1,689,164 - Psest_1584 0.43 -0.7 1,689,178 + Psest_1584 0.44 -1.9 1,689,178 + Psest_1584 0.44 +0.4 1,689,178 + Psest_1584 0.44 -0.1 1,689,179 - Psest_1584 0.45 -0.4 1,689,179 - Psest_1584 0.45 +2.0 1,689,179 - Psest_1584 0.45 -0.6 1,689,179 - Psest_1584 0.45 +0.1
Or see this region's nucleotide sequence