Experiment: Thallium(I) acetate 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2549 and Psest_2550 are separated by 21 nucleotides Psest_2550 and Psest_2551 are separated by 18 nucleotides Psest_2551 and Psest_2552 are separated by 4 nucleotides
Psest_2549: Psest_2549 - putative efflux protein, MATE family, at 2,728,969 to 2,730,363
_2549
Psest_2550: Psest_2550 - Rhodanese-like domain./Cyclic nucleotide-binding domain., at 2,730,385 to 2,731,485
_2550
Psest_2551: Psest_2551 - 1-aminocyclopropane-1-carboxylate deaminase, at 2,731,504 to 2,732,445
_2551
Psest_2552: Psest_2552 - hypothetical protein, at 2,732,450 to 2,733,805
_2552
Position (kb)
2730
2731
2732 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2729.468 kb on + strand, within Psest_2549 at 2729.468 kb on + strand, within Psest_2549 at 2729.469 kb on - strand, within Psest_2549 at 2729.509 kb on + strand, within Psest_2549 at 2729.510 kb on - strand, within Psest_2549 at 2729.510 kb on - strand, within Psest_2549 at 2729.510 kb on - strand, within Psest_2549 at 2729.510 kb on - strand, within Psest_2549 at 2729.510 kb on - strand, within Psest_2549 at 2729.510 kb on - strand, within Psest_2549 at 2729.521 kb on + strand, within Psest_2549 at 2729.521 kb on + strand, within Psest_2549 at 2729.522 kb on - strand, within Psest_2549 at 2729.522 kb on - strand, within Psest_2549 at 2729.522 kb on - strand, within Psest_2549 at 2729.522 kb on - strand, within Psest_2549 at 2729.522 kb on - strand, within Psest_2549 at 2729.823 kb on + strand, within Psest_2549 at 2729.824 kb on - strand, within Psest_2549 at 2729.873 kb on + strand, within Psest_2549 at 2729.957 kb on - strand, within Psest_2549 at 2730.013 kb on + strand, within Psest_2549 at 2730.013 kb on + strand, within Psest_2549 at 2730.013 kb on + strand, within Psest_2549 at 2730.013 kb on + strand, within Psest_2549 at 2730.013 kb on + strand, within Psest_2549 at 2730.014 kb on - strand, within Psest_2549 at 2730.014 kb on - strand, within Psest_2549 at 2730.014 kb on - strand, within Psest_2549 at 2730.014 kb on - strand, within Psest_2549 at 2730.014 kb on - strand, within Psest_2549 at 2730.015 kb on + strand, within Psest_2549 at 2730.016 kb on - strand, within Psest_2549 at 2730.016 kb on - strand, within Psest_2549 at 2730.061 kb on + strand, within Psest_2549 at 2730.061 kb on + strand, within Psest_2549 at 2730.061 kb on + strand, within Psest_2549 at 2730.061 kb on + strand, within Psest_2549 at 2730.061 kb on + strand, within Psest_2549 at 2730.061 kb on + strand, within Psest_2549 at 2730.061 kb on + strand, within Psest_2549 at 2730.062 kb on - strand, within Psest_2549 at 2730.062 kb on - strand, within Psest_2549 at 2730.062 kb on - strand, within Psest_2549 at 2730.062 kb on - strand, within Psest_2549 at 2730.062 kb on - strand, within Psest_2549 at 2730.151 kb on + strand, within Psest_2549 at 2730.151 kb on + strand, within Psest_2549 at 2730.151 kb on + strand, within Psest_2549 at 2730.362 kb on - strand at 2730.362 kb on - strand at 2730.362 kb on - strand at 2730.376 kb on + strand at 2730.376 kb on + strand at 2730.376 kb on + strand at 2730.376 kb on + strand at 2730.376 kb on + strand at 2730.376 kb on + strand at 2730.377 kb on - strand at 2730.377 kb on - strand at 2730.377 kb on - strand at 2730.387 kb on - strand at 2730.387 kb on - strand at 2730.501 kb on - strand, within Psest_2550 at 2730.532 kb on + strand, within Psest_2550 at 2730.567 kb on - strand, within Psest_2550 at 2730.614 kb on - strand, within Psest_2550 at 2730.950 kb on + strand, within Psest_2550 at 2730.951 kb on - strand, within Psest_2550 at 2730.951 kb on - strand, within Psest_2550 at 2730.951 kb on - strand, within Psest_2550 at 2730.951 kb on - strand, within Psest_2550 at 2730.951 kb on - strand, within Psest_2550 at 2730.951 kb on - strand, within Psest_2550 at 2731.036 kb on + strand, within Psest_2550 at 2731.036 kb on + strand, within Psest_2550 at 2731.036 kb on + strand, within Psest_2550 at 2731.036 kb on + strand, within Psest_2550 at 2731.036 kb on + strand, within Psest_2550 at 2731.036 kb on + strand, within Psest_2550 at 2731.036 kb on + strand, within Psest_2550 at 2731.036 kb on + strand, within Psest_2550 at 2731.036 kb on + strand, within Psest_2550 at 2731.037 kb on - strand, within Psest_2550 at 2731.037 kb on - strand, within Psest_2550 at 2731.037 kb on - strand, within Psest_2550 at 2731.037 kb on - strand, within Psest_2550 at 2731.037 kb on - strand, within Psest_2550 at 2731.037 kb on - strand, within Psest_2550 at 2731.037 kb on - strand, within Psest_2550 at 2731.037 kb on - strand, within Psest_2550 at 2731.037 kb on - strand, within Psest_2550 at 2731.037 kb on - strand, within Psest_2550 at 2731.037 kb on - strand, within Psest_2550 at 2731.037 kb on - strand, within Psest_2550 at 2731.037 kb on - strand, within Psest_2550 at 2731.037 kb on - strand, within Psest_2550 at 2731.243 kb on - strand, within Psest_2550 at 2731.329 kb on - strand, within Psest_2550 at 2731.329 kb on - strand, within Psest_2550 at 2731.602 kb on - strand, within Psest_2551 at 2731.602 kb on - strand, within Psest_2551 at 2731.641 kb on + strand, within Psest_2551 at 2731.641 kb on + strand, within Psest_2551 at 2731.641 kb on + strand, within Psest_2551 at 2731.642 kb on - strand, within Psest_2551 at 2731.642 kb on - strand, within Psest_2551 at 2731.642 kb on - strand, within Psest_2551 at 2731.649 kb on + strand, within Psest_2551 at 2731.649 kb on + strand, within Psest_2551 at 2731.649 kb on + strand, within Psest_2551 at 2731.649 kb on + strand, within Psest_2551 at 2731.649 kb on + strand, within Psest_2551 at 2731.649 kb on + strand, within Psest_2551 at 2731.649 kb on + strand, within Psest_2551 at 2731.649 kb on + strand, within Psest_2551 at 2731.649 kb on + strand, within Psest_2551 at 2731.649 kb on + strand, within Psest_2551 at 2731.649 kb on + strand, within Psest_2551 at 2731.649 kb on + strand, within Psest_2551 at 2731.649 kb on + strand, within Psest_2551 at 2731.649 kb on + strand, within Psest_2551 at 2731.649 kb on + strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.650 kb on - strand, within Psest_2551 at 2731.758 kb on - strand, within Psest_2551 at 2731.917 kb on + strand, within Psest_2551 at 2731.926 kb on - strand, within Psest_2551 at 2732.131 kb on + strand, within Psest_2551 at 2732.131 kb on + strand, within Psest_2551 at 2732.132 kb on - strand, within Psest_2551 at 2732.132 kb on - strand, within Psest_2551 at 2732.132 kb on - strand, within Psest_2551 at 2732.132 kb on - strand, within Psest_2551 at 2732.132 kb on - strand, within Psest_2551 at 2732.300 kb on - strand, within Psest_2551 at 2732.353 kb on + strand at 2732.354 kb on - strand at 2732.354 kb on - strand at 2732.354 kb on - strand at 2732.357 kb on - strand at 2732.456 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.1 mg/ml remove 2,729,468 + Psest_2549 0.36 +0.7 2,729,468 + Psest_2549 0.36 -0.2 2,729,469 - Psest_2549 0.36 -0.7 2,729,509 + Psest_2549 0.39 +0.3 2,729,510 - Psest_2549 0.39 -0.9 2,729,510 - Psest_2549 0.39 -0.9 2,729,510 - Psest_2549 0.39 -0.3 2,729,510 - Psest_2549 0.39 -0.3 2,729,510 - Psest_2549 0.39 +0.5 2,729,510 - Psest_2549 0.39 +0.0 2,729,521 + Psest_2549 0.40 -1.0 2,729,521 + Psest_2549 0.40 +0.8 2,729,522 - Psest_2549 0.40 +0.6 2,729,522 - Psest_2549 0.40 +2.2 2,729,522 - Psest_2549 0.40 -0.5 2,729,522 - Psest_2549 0.40 +2.8 2,729,522 - Psest_2549 0.40 -1.9 2,729,823 + Psest_2549 0.61 -0.6 2,729,824 - Psest_2549 0.61 +2.1 2,729,873 + Psest_2549 0.65 +0.2 2,729,957 - Psest_2549 0.71 -0.8 2,730,013 + Psest_2549 0.75 -0.8 2,730,013 + Psest_2549 0.75 +0.4 2,730,013 + Psest_2549 0.75 -1.2 2,730,013 + Psest_2549 0.75 -0.5 2,730,013 + Psest_2549 0.75 +1.0 2,730,014 - Psest_2549 0.75 +0.2 2,730,014 - Psest_2549 0.75 +0.1 2,730,014 - Psest_2549 0.75 +0.7 2,730,014 - Psest_2549 0.75 -0.3 2,730,014 - Psest_2549 0.75 +2.4 2,730,015 + Psest_2549 0.75 -0.3 2,730,016 - Psest_2549 0.75 +0.3 2,730,016 - Psest_2549 0.75 -0.8 2,730,061 + Psest_2549 0.78 +0.7 2,730,061 + Psest_2549 0.78 -0.8 2,730,061 + Psest_2549 0.78 -1.0 2,730,061 + Psest_2549 0.78 -2.1 2,730,061 + Psest_2549 0.78 -1.0 2,730,061 + Psest_2549 0.78 -0.8 2,730,061 + Psest_2549 0.78 -0.8 2,730,062 - Psest_2549 0.78 +1.9 2,730,062 - Psest_2549 0.78 -1.9 2,730,062 - Psest_2549 0.78 +1.0 2,730,062 - Psest_2549 0.78 +0.5 2,730,062 - Psest_2549 0.78 +1.8 2,730,151 + Psest_2549 0.85 +0.0 2,730,151 + Psest_2549 0.85 +0.5 2,730,151 + Psest_2549 0.85 -0.3 2,730,362 - -1.1 2,730,362 - -0.1 2,730,362 - +0.0 2,730,376 + -0.7 2,730,376 + +1.4 2,730,376 + +0.4 2,730,376 + -0.1 2,730,376 + -0.7 2,730,376 + +0.4 2,730,377 - +1.9 2,730,377 - -0.3 2,730,377 - +0.5 2,730,387 - +0.2 2,730,387 - -0.5 2,730,501 - Psest_2550 0.11 -0.2 2,730,532 + Psest_2550 0.13 +0.9 2,730,567 - Psest_2550 0.17 -1.2 2,730,614 - Psest_2550 0.21 -0.3 2,730,950 + Psest_2550 0.51 +1.3 2,730,951 - Psest_2550 0.51 -0.8 2,730,951 - Psest_2550 0.51 +0.7 2,730,951 - Psest_2550 0.51 -0.6 2,730,951 - Psest_2550 0.51 -0.7 2,730,951 - Psest_2550 0.51 +0.7 2,730,951 - Psest_2550 0.51 -0.1 2,731,036 + Psest_2550 0.59 -0.1 2,731,036 + Psest_2550 0.59 +0.0 2,731,036 + Psest_2550 0.59 -1.0 2,731,036 + Psest_2550 0.59 -0.2 2,731,036 + Psest_2550 0.59 -0.2 2,731,036 + Psest_2550 0.59 -0.5 2,731,036 + Psest_2550 0.59 -2.3 2,731,036 + Psest_2550 0.59 -1.1 2,731,036 + Psest_2550 0.59 -0.1 2,731,037 - Psest_2550 0.59 +0.3 2,731,037 - Psest_2550 0.59 +0.1 2,731,037 - Psest_2550 0.59 -0.6 2,731,037 - Psest_2550 0.59 +0.5 2,731,037 - Psest_2550 0.59 +0.5 2,731,037 - Psest_2550 0.59 +0.0 2,731,037 - Psest_2550 0.59 -0.9 2,731,037 - Psest_2550 0.59 -0.5 2,731,037 - Psest_2550 0.59 -0.8 2,731,037 - Psest_2550 0.59 -1.3 2,731,037 - Psest_2550 0.59 +0.4 2,731,037 - Psest_2550 0.59 +1.1 2,731,037 - Psest_2550 0.59 -0.2 2,731,037 - Psest_2550 0.59 -1.4 2,731,243 - Psest_2550 0.78 -0.6 2,731,329 - Psest_2550 0.86 -0.7 2,731,329 - Psest_2550 0.86 -0.7 2,731,602 - Psest_2551 0.10 -0.3 2,731,602 - Psest_2551 0.10 +0.2 2,731,641 + Psest_2551 0.15 +0.7 2,731,641 + Psest_2551 0.15 +0.8 2,731,641 + Psest_2551 0.15 +0.1 2,731,642 - Psest_2551 0.15 +0.2 2,731,642 - Psest_2551 0.15 -1.3 2,731,642 - Psest_2551 0.15 +0.3 2,731,649 + Psest_2551 0.15 -1.2 2,731,649 + Psest_2551 0.15 -1.6 2,731,649 + Psest_2551 0.15 -1.3 2,731,649 + Psest_2551 0.15 +2.6 2,731,649 + Psest_2551 0.15 +1.3 2,731,649 + Psest_2551 0.15 +0.1 2,731,649 + Psest_2551 0.15 -1.5 2,731,649 + Psest_2551 0.15 +0.3 2,731,649 + Psest_2551 0.15 +0.8 2,731,649 + Psest_2551 0.15 +1.1 2,731,649 + Psest_2551 0.15 +0.6 2,731,649 + Psest_2551 0.15 +0.3 2,731,649 + Psest_2551 0.15 -1.1 2,731,649 + Psest_2551 0.15 -0.4 2,731,649 + Psest_2551 0.15 -1.4 2,731,650 - Psest_2551 0.15 -1.1 2,731,650 - Psest_2551 0.15 -0.3 2,731,650 - Psest_2551 0.15 +1.6 2,731,650 - Psest_2551 0.15 +1.0 2,731,650 - Psest_2551 0.15 -0.2 2,731,650 - Psest_2551 0.15 +0.6 2,731,650 - Psest_2551 0.15 -0.8 2,731,650 - Psest_2551 0.15 +1.0 2,731,650 - Psest_2551 0.15 -0.5 2,731,650 - Psest_2551 0.15 -0.7 2,731,650 - Psest_2551 0.15 +1.0 2,731,650 - Psest_2551 0.15 +0.1 2,731,650 - Psest_2551 0.15 +0.4 2,731,650 - Psest_2551 0.15 -0.8 2,731,650 - Psest_2551 0.15 +0.0 2,731,650 - Psest_2551 0.15 -1.2 2,731,650 - Psest_2551 0.15 +0.5 2,731,650 - Psest_2551 0.15 -0.3 2,731,650 - Psest_2551 0.15 +0.5 2,731,758 - Psest_2551 0.27 -0.7 2,731,917 + Psest_2551 0.44 +1.2 2,731,926 - Psest_2551 0.45 +1.9 2,732,131 + Psest_2551 0.67 +0.9 2,732,131 + Psest_2551 0.67 -1.4 2,732,132 - Psest_2551 0.67 +0.0 2,732,132 - Psest_2551 0.67 +0.3 2,732,132 - Psest_2551 0.67 +1.2 2,732,132 - Psest_2551 0.67 +1.0 2,732,132 - Psest_2551 0.67 +0.7 2,732,300 - Psest_2551 0.85 -0.0 2,732,353 + -0.7 2,732,354 - -0.6 2,732,354 - +0.1 2,732,354 - +0.5 2,732,357 - -0.5 2,732,456 - +0.3
Or see this region's nucleotide sequence