Experiment: Thallium(I) acetate 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1139 and Psest_1140 are separated by 45 nucleotides Psest_1140 and Psest_1141 are separated by 4 nucleotides
Psest_1139: Psest_1139 - PAS domain S-box, at 1,236,036 to 1,238,051
_1139
Psest_1140: Psest_1140 - 2-dehydropantoate 2-reductase, at 1,238,097 to 1,239,008
_1140
Psest_1141: Psest_1141 - diguanylate cyclase (GGDEF) domain, at 1,239,013 to 1,239,978
_1141
Position (kb)
1238
1239
1240 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1237.129 kb on + strand, within Psest_1139 at 1237.130 kb on - strand, within Psest_1139 at 1237.130 kb on - strand, within Psest_1139 at 1237.189 kb on + strand, within Psest_1139 at 1237.432 kb on + strand, within Psest_1139 at 1237.433 kb on - strand, within Psest_1139 at 1237.579 kb on + strand, within Psest_1139 at 1237.579 kb on + strand, within Psest_1139 at 1237.579 kb on + strand, within Psest_1139 at 1237.579 kb on + strand, within Psest_1139 at 1237.580 kb on - strand, within Psest_1139 at 1237.580 kb on - strand, within Psest_1139 at 1237.580 kb on - strand, within Psest_1139 at 1237.580 kb on - strand, within Psest_1139 at 1237.580 kb on - strand, within Psest_1139 at 1237.771 kb on + strand, within Psest_1139 at 1237.772 kb on - strand, within Psest_1139 at 1237.772 kb on - strand, within Psest_1139 at 1237.798 kb on + strand, within Psest_1139 at 1238.066 kb on + strand at 1238.066 kb on + strand at 1238.254 kb on + strand, within Psest_1140 at 1238.254 kb on + strand, within Psest_1140 at 1238.254 kb on + strand, within Psest_1140 at 1238.254 kb on + strand, within Psest_1140 at 1238.254 kb on + strand, within Psest_1140 at 1238.254 kb on + strand, within Psest_1140 at 1238.254 kb on + strand, within Psest_1140 at 1238.255 kb on - strand, within Psest_1140 at 1238.266 kb on + strand, within Psest_1140 at 1238.266 kb on + strand, within Psest_1140 at 1238.267 kb on - strand, within Psest_1140 at 1238.267 kb on - strand, within Psest_1140 at 1238.422 kb on + strand, within Psest_1140 at 1238.423 kb on - strand, within Psest_1140 at 1238.423 kb on - strand, within Psest_1140 at 1238.503 kb on + strand, within Psest_1140 at 1238.773 kb on + strand, within Psest_1140 at 1238.773 kb on + strand, within Psest_1140 at 1238.773 kb on + strand, within Psest_1140 at 1238.774 kb on - strand, within Psest_1140 at 1238.774 kb on - strand, within Psest_1140 at 1239.059 kb on + strand at 1239.059 kb on + strand at 1239.059 kb on + strand at 1239.060 kb on - strand at 1239.359 kb on + strand, within Psest_1141 at 1239.360 kb on - strand, within Psest_1141 at 1239.360 kb on - strand, within Psest_1141 at 1239.360 kb on - strand, within Psest_1141 at 1239.362 kb on - strand, within Psest_1141 at 1239.362 kb on - strand, within Psest_1141 at 1239.362 kb on - strand, within Psest_1141 at 1239.419 kb on + strand, within Psest_1141 at 1239.419 kb on + strand, within Psest_1141 at 1239.419 kb on + strand, within Psest_1141 at 1239.420 kb on - strand, within Psest_1141 at 1239.422 kb on + strand, within Psest_1141 at 1239.422 kb on + strand, within Psest_1141 at 1239.422 kb on + strand, within Psest_1141 at 1239.422 kb on + strand, within Psest_1141 at 1239.422 kb on + strand, within Psest_1141 at 1239.422 kb on + strand, within Psest_1141 at 1239.422 kb on + strand, within Psest_1141 at 1239.423 kb on - strand, within Psest_1141 at 1239.423 kb on - strand, within Psest_1141 at 1239.423 kb on - strand, within Psest_1141 at 1239.423 kb on - strand, within Psest_1141 at 1239.423 kb on - strand, within Psest_1141 at 1239.423 kb on - strand, within Psest_1141 at 1239.423 kb on - strand, within Psest_1141 at 1239.423 kb on - strand, within Psest_1141 at 1239.688 kb on + strand, within Psest_1141 at 1239.728 kb on + strand, within Psest_1141 at 1239.728 kb on + strand, within Psest_1141 at 1239.728 kb on + strand, within Psest_1141 at 1239.728 kb on + strand, within Psest_1141 at 1239.729 kb on - strand, within Psest_1141 at 1239.729 kb on - strand, within Psest_1141 at 1239.729 kb on - strand, within Psest_1141 at 1239.729 kb on - strand, within Psest_1141 at 1239.729 kb on - strand, within Psest_1141 at 1239.729 kb on - strand, within Psest_1141 at 1239.729 kb on - strand, within Psest_1141 at 1239.735 kb on - strand, within Psest_1141
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.1 mg/ml remove 1,237,129 + Psest_1139 0.54 +1.4 1,237,130 - Psest_1139 0.54 +0.7 1,237,130 - Psest_1139 0.54 -1.0 1,237,189 + Psest_1139 0.57 -2.0 1,237,432 + Psest_1139 0.69 -0.6 1,237,433 - Psest_1139 0.69 -1.0 1,237,579 + Psest_1139 0.77 -1.7 1,237,579 + Psest_1139 0.77 +0.0 1,237,579 + Psest_1139 0.77 +0.1 1,237,579 + Psest_1139 0.77 +1.7 1,237,580 - Psest_1139 0.77 +0.3 1,237,580 - Psest_1139 0.77 +0.1 1,237,580 - Psest_1139 0.77 +1.9 1,237,580 - Psest_1139 0.77 -0.2 1,237,580 - Psest_1139 0.77 -0.4 1,237,771 + Psest_1139 0.86 -0.0 1,237,772 - Psest_1139 0.86 +1.4 1,237,772 - Psest_1139 0.86 +0.9 1,237,798 + Psest_1139 0.87 +0.3 1,238,066 + +2.0 1,238,066 + +0.6 1,238,254 + Psest_1140 0.17 +1.3 1,238,254 + Psest_1140 0.17 +0.3 1,238,254 + Psest_1140 0.17 +3.3 1,238,254 + Psest_1140 0.17 -0.5 1,238,254 + Psest_1140 0.17 +1.1 1,238,254 + Psest_1140 0.17 +1.8 1,238,254 + Psest_1140 0.17 +1.0 1,238,255 - Psest_1140 0.17 -0.6 1,238,266 + Psest_1140 0.19 +1.7 1,238,266 + Psest_1140 0.19 +0.5 1,238,267 - Psest_1140 0.19 -0.1 1,238,267 - Psest_1140 0.19 +1.7 1,238,422 + Psest_1140 0.36 +0.1 1,238,423 - Psest_1140 0.36 +1.1 1,238,423 - Psest_1140 0.36 -1.3 1,238,503 + Psest_1140 0.45 +0.6 1,238,773 + Psest_1140 0.74 +0.0 1,238,773 + Psest_1140 0.74 -1.2 1,238,773 + Psest_1140 0.74 -0.2 1,238,774 - Psest_1140 0.74 +0.9 1,238,774 - Psest_1140 0.74 +1.7 1,239,059 + +1.1 1,239,059 + -1.7 1,239,059 + -2.3 1,239,060 - +0.9 1,239,359 + Psest_1141 0.36 -0.7 1,239,360 - Psest_1141 0.36 +0.6 1,239,360 - Psest_1141 0.36 -0.0 1,239,360 - Psest_1141 0.36 -2.6 1,239,362 - Psest_1141 0.36 -0.1 1,239,362 - Psest_1141 0.36 +1.4 1,239,362 - Psest_1141 0.36 +0.8 1,239,419 + Psest_1141 0.42 +0.1 1,239,419 + Psest_1141 0.42 +1.5 1,239,419 + Psest_1141 0.42 +2.0 1,239,420 - Psest_1141 0.42 +0.7 1,239,422 + Psest_1141 0.42 -2.0 1,239,422 + Psest_1141 0.42 +0.0 1,239,422 + Psest_1141 0.42 +0.1 1,239,422 + Psest_1141 0.42 +0.6 1,239,422 + Psest_1141 0.42 +1.3 1,239,422 + Psest_1141 0.42 -1.2 1,239,422 + Psest_1141 0.42 +1.4 1,239,423 - Psest_1141 0.42 +2.8 1,239,423 - Psest_1141 0.42 -1.0 1,239,423 - Psest_1141 0.42 -0.0 1,239,423 - Psest_1141 0.42 +0.4 1,239,423 - Psest_1141 0.42 -0.3 1,239,423 - Psest_1141 0.42 +1.0 1,239,423 - Psest_1141 0.42 -0.0 1,239,423 - Psest_1141 0.42 -1.6 1,239,688 + Psest_1141 0.70 +2.0 1,239,728 + Psest_1141 0.74 +2.6 1,239,728 + Psest_1141 0.74 +2.4 1,239,728 + Psest_1141 0.74 +2.0 1,239,728 + Psest_1141 0.74 -1.3 1,239,729 - Psest_1141 0.74 -0.1 1,239,729 - Psest_1141 0.74 +3.0 1,239,729 - Psest_1141 0.74 -0.3 1,239,729 - Psest_1141 0.74 -0.4 1,239,729 - Psest_1141 0.74 -0.4 1,239,729 - Psest_1141 0.74 -0.1 1,239,729 - Psest_1141 0.74 +0.9 1,239,735 - Psest_1141 0.75 +0.2
Or see this region's nucleotide sequence