Experiment: Thallium(I) acetate 0.09 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3944 and Psest_3945 are separated by 20 nucleotides Psest_3945 and Psest_3946 are separated by 66 nucleotides Psest_3946 and Psest_3947 overlap by 4 nucleotides Psest_3947 and Psest_3948 overlap by 4 nucleotides Psest_3948 and Psest_3949 are separated by 173 nucleotides
Psest_3944: Psest_3944 - phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) , at 4,115,299 to 4,115,631
_3944
Psest_3945: Psest_3945 - twin arginine-targeting protein translocase, TatA/E family, at 4,115,652 to 4,115,882
_3945
Psest_3946: Psest_3946 - twin arginine-targeting protein translocase TatB, at 4,115,949 to 4,116,377
_3946
Psest_3947: Psest_3947 - Twin arginine targeting (Tat) protein translocase TatC, at 4,116,374 to 4,117,177
_3947
Psest_3948: Psest_3948 - RNA methyltransferase, RsmE family, at 4,117,174 to 4,117,881
_3948
Psest_3949: Psest_3949 - Uncharacterised protein family (UPF0158)., at 4,118,055 to 4,118,480
_3949
Position (kb)
4116
4117
4118 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4115.383 kb on + strand, within Psest_3944 at 4115.383 kb on + strand, within Psest_3944 at 4115.491 kb on + strand, within Psest_3944 at 4115.491 kb on + strand, within Psest_3944 at 4115.880 kb on + strand at 4115.880 kb on + strand at 4115.928 kb on + strand at 4115.928 kb on + strand at 4117.945 kb on - strand at 4117.945 kb on - strand at 4118.022 kb on + strand at 4118.022 kb on + strand at 4118.022 kb on + strand at 4118.022 kb on + strand at 4118.022 kb on + strand at 4118.022 kb on + strand at 4118.023 kb on - strand at 4118.023 kb on - strand at 4118.023 kb on - strand at 4118.023 kb on - strand at 4118.029 kb on + strand at 4118.071 kb on + strand at 4118.071 kb on + strand at 4118.071 kb on + strand at 4118.071 kb on + strand at 4118.071 kb on + strand at 4118.071 kb on + strand at 4118.071 kb on + strand at 4118.072 kb on - strand at 4118.072 kb on - strand at 4118.091 kb on + strand at 4118.091 kb on + strand at 4118.092 kb on - strand at 4118.092 kb on - strand at 4118.122 kb on - strand, within Psest_3949 at 4118.122 kb on - strand, within Psest_3949 at 4118.124 kb on + strand, within Psest_3949 at 4118.124 kb on + strand, within Psest_3949 at 4118.125 kb on - strand, within Psest_3949 at 4118.125 kb on - strand, within Psest_3949 at 4118.125 kb on - strand, within Psest_3949 at 4118.125 kb on - strand, within Psest_3949 at 4118.134 kb on + strand, within Psest_3949 at 4118.134 kb on + strand, within Psest_3949 at 4118.134 kb on + strand, within Psest_3949 at 4118.135 kb on - strand, within Psest_3949 at 4118.135 kb on - strand, within Psest_3949
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.09 mg/ml remove 4,115,383 + Psest_3944 0.25 -0.7 4,115,383 + Psest_3944 0.25 +1.6 4,115,491 + Psest_3944 0.58 +0.2 4,115,491 + Psest_3944 0.58 -0.5 4,115,880 + +0.4 4,115,880 + +0.7 4,115,928 + +0.2 4,115,928 + +1.0 4,117,945 - -1.7 4,117,945 - +1.5 4,118,022 + +1.9 4,118,022 + -0.8 4,118,022 + +0.3 4,118,022 + +0.7 4,118,022 + -0.3 4,118,022 + -0.8 4,118,023 - -1.1 4,118,023 - +1.3 4,118,023 - -1.1 4,118,023 - -1.0 4,118,029 + +0.2 4,118,071 + -1.2 4,118,071 + +0.4 4,118,071 + -1.0 4,118,071 + +0.3 4,118,071 + +0.2 4,118,071 + -0.2 4,118,071 + -0.6 4,118,072 - -0.1 4,118,072 - +0.3 4,118,091 + -0.0 4,118,091 + +1.3 4,118,092 - -0.2 4,118,092 - -0.8 4,118,122 - Psest_3949 0.16 +0.5 4,118,122 - Psest_3949 0.16 -0.9 4,118,124 + Psest_3949 0.16 +0.4 4,118,124 + Psest_3949 0.16 -1.2 4,118,125 - Psest_3949 0.16 +0.3 4,118,125 - Psest_3949 0.16 +0.7 4,118,125 - Psest_3949 0.16 -1.8 4,118,125 - Psest_3949 0.16 -1.3 4,118,134 + Psest_3949 0.19 +0.5 4,118,134 + Psest_3949 0.19 +0.4 4,118,134 + Psest_3949 0.19 +0.0 4,118,135 - Psest_3949 0.19 +1.1 4,118,135 - Psest_3949 0.19 -0.7
Or see this region's nucleotide sequence