Experiment: Thallium(I) acetate 0.09 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0158 and Psest_0159 are separated by 3 nucleotides Psest_0159 and Psest_0160 are separated by 2 nucleotides Psest_0160 and Psest_0161 are separated by 71 nucleotides
Psest_0158: Psest_0158 - ABC-type amino acid transport/signal transduction systems, periplasmic component/domain, at 156,307 to 157,053
_0158
Psest_0159: Psest_0159 - Uncharacterized protein conserved in bacteria, at 157,057 to 157,848
_0159
Psest_0160: Psest_0160 - C-terminal peptidase (prc), at 157,851 to 159,170
_0160
Psest_0161: Psest_0161 - Membrane-bound metallopeptidase, at 159,242 to 160,504
_0161
Position (kb) 157
158
159
160 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 156.874 kb on + strand, within Psest_0158 at 156.987 kb on - strand at 157.059 kb on - strand at 157.065 kb on - strand at 157.435 kb on + strand, within Psest_0159 at 157.435 kb on + strand, within Psest_0159 at 157.436 kb on - strand, within Psest_0159 at 157.436 kb on - strand, within Psest_0159 at 157.537 kb on + strand, within Psest_0159 at 157.537 kb on + strand, within Psest_0159 at 157.732 kb on + strand, within Psest_0159 at 157.790 kb on + strand at 157.791 kb on - strand at 157.792 kb on + strand at 157.793 kb on - strand at 158.114 kb on - strand, within Psest_0160 at 159.184 kb on + strand at 159.307 kb on - strand at 159.342 kb on - strand at 159.412 kb on - strand, within Psest_0161 at 159.482 kb on + strand, within Psest_0161 at 159.482 kb on + strand, within Psest_0161 at 159.483 kb on - strand, within Psest_0161 at 159.540 kb on - strand, within Psest_0161 at 160.086 kb on + strand, within Psest_0161
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.09 mg/ml remove 156,874 + Psest_0158 0.76 -0.7 156,987 - +0.1 157,059 - -2.3 157,065 - +0.8 157,435 + Psest_0159 0.48 -1.8 157,435 + Psest_0159 0.48 -0.9 157,436 - Psest_0159 0.48 +0.8 157,436 - Psest_0159 0.48 -0.6 157,537 + Psest_0159 0.61 +0.5 157,537 + Psest_0159 0.61 +0.2 157,732 + Psest_0159 0.85 +1.1 157,790 + +0.5 157,791 - +0.7 157,792 + -1.4 157,793 - -0.3 158,114 - Psest_0160 0.20 +4.1 159,184 + +1.3 159,307 - -1.0 159,342 - -0.1 159,412 - Psest_0161 0.13 -0.2 159,482 + Psest_0161 0.19 +1.3 159,482 + Psest_0161 0.19 +1.4 159,483 - Psest_0161 0.19 +0.1 159,540 - Psest_0161 0.24 -1.3 160,086 + Psest_0161 0.67 -0.2
Or see this region's nucleotide sequence