Experiment: Thallium(I) acetate 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2915 and Psest_2916 are separated by 178 nucleotides Psest_2916 and Psest_2917 are separated by 77 nucleotides Psest_2917 and Psest_2918 are separated by 129 nucleotides
Psest_2915: Psest_2915 - Glucose/sorbosone dehydrogenases, at 3,108,380 to 3,109,528
_2915
Psest_2916: Psest_2916 - hypothetical protein, at 3,109,707 to 3,109,886
_2916
Psest_2917: Psest_2917 - 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases, at 3,109,964 to 3,110,689
_2917
Psest_2918: Psest_2918 - amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-), at 3,110,819 to 3,111,589
_2918
Position (kb)
3109
3110 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3108.717 kb on + strand, within Psest_2915 at 3108.717 kb on + strand, within Psest_2915 at 3108.717 kb on + strand, within Psest_2915 at 3108.717 kb on + strand, within Psest_2915 at 3108.718 kb on - strand, within Psest_2915 at 3108.718 kb on - strand, within Psest_2915 at 3108.718 kb on - strand, within Psest_2915 at 3108.718 kb on - strand, within Psest_2915 at 3108.718 kb on - strand, within Psest_2915 at 3108.718 kb on - strand, within Psest_2915 at 3108.718 kb on - strand, within Psest_2915 at 3108.718 kb on - strand, within Psest_2915 at 3108.750 kb on + strand, within Psest_2915 at 3108.750 kb on + strand, within Psest_2915 at 3109.188 kb on + strand, within Psest_2915 at 3109.188 kb on + strand, within Psest_2915 at 3109.188 kb on + strand, within Psest_2915 at 3109.188 kb on + strand, within Psest_2915 at 3109.278 kb on - strand, within Psest_2915 at 3109.278 kb on - strand, within Psest_2915 at 3109.278 kb on - strand, within Psest_2915 at 3109.278 kb on - strand, within Psest_2915 at 3109.567 kb on + strand at 3109.641 kb on + strand at 3109.668 kb on + strand at 3109.671 kb on - strand at 3109.690 kb on + strand at 3110.036 kb on + strand at 3110.036 kb on + strand at 3110.036 kb on + strand at 3110.036 kb on + strand at 3110.036 kb on + strand at 3110.036 kb on + strand at 3110.036 kb on + strand at 3110.036 kb on + strand at 3110.036 kb on + strand at 3110.036 kb on + strand at 3110.036 kb on + strand at 3110.036 kb on + strand at 3110.036 kb on + strand at 3110.036 kb on + strand at 3110.036 kb on - strand at 3110.037 kb on - strand, within Psest_2917 at 3110.037 kb on - strand, within Psest_2917 at 3110.037 kb on - strand, within Psest_2917 at 3110.037 kb on - strand, within Psest_2917 at 3110.037 kb on - strand, within Psest_2917 at 3110.405 kb on + strand, within Psest_2917 at 3110.405 kb on + strand, within Psest_2917 at 3110.405 kb on + strand, within Psest_2917 at 3110.405 kb on + strand, within Psest_2917 at 3110.405 kb on + strand, within Psest_2917 at 3110.405 kb on + strand, within Psest_2917 at 3110.405 kb on + strand, within Psest_2917 at 3110.405 kb on + strand, within Psest_2917 at 3110.405 kb on + strand, within Psest_2917 at 3110.406 kb on - strand, within Psest_2917 at 3110.406 kb on - strand, within Psest_2917 at 3110.406 kb on - strand, within Psest_2917 at 3110.741 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.08 mg/ml remove 3,108,717 + Psest_2915 0.29 -1.3 3,108,717 + Psest_2915 0.29 -1.2 3,108,717 + Psest_2915 0.29 +0.3 3,108,717 + Psest_2915 0.29 -0.5 3,108,718 - Psest_2915 0.29 +2.6 3,108,718 - Psest_2915 0.29 +0.6 3,108,718 - Psest_2915 0.29 +0.5 3,108,718 - Psest_2915 0.29 -1.0 3,108,718 - Psest_2915 0.29 +0.8 3,108,718 - Psest_2915 0.29 -1.4 3,108,718 - Psest_2915 0.29 -0.2 3,108,718 - Psest_2915 0.29 -2.6 3,108,750 + Psest_2915 0.32 -0.0 3,108,750 + Psest_2915 0.32 +1.0 3,109,188 + Psest_2915 0.70 -0.6 3,109,188 + Psest_2915 0.70 -0.9 3,109,188 + Psest_2915 0.70 -1.3 3,109,188 + Psest_2915 0.70 +1.4 3,109,278 - Psest_2915 0.78 +0.4 3,109,278 - Psest_2915 0.78 -0.6 3,109,278 - Psest_2915 0.78 -0.7 3,109,278 - Psest_2915 0.78 -0.1 3,109,567 + +1.9 3,109,641 + +1.4 3,109,668 + -1.8 3,109,671 - -2.1 3,109,690 + -0.7 3,110,036 + +0.4 3,110,036 + +0.6 3,110,036 + -2.4 3,110,036 + -0.4 3,110,036 + -1.2 3,110,036 + -0.9 3,110,036 + +0.3 3,110,036 + +1.2 3,110,036 + +0.7 3,110,036 + +0.5 3,110,036 + +0.5 3,110,036 + +1.1 3,110,036 + -0.5 3,110,036 + +0.1 3,110,036 - -0.7 3,110,037 - Psest_2917 0.10 +1.1 3,110,037 - Psest_2917 0.10 +0.3 3,110,037 - Psest_2917 0.10 -0.2 3,110,037 - Psest_2917 0.10 +0.0 3,110,037 - Psest_2917 0.10 -1.0 3,110,405 + Psest_2917 0.61 +3.5 3,110,405 + Psest_2917 0.61 +1.6 3,110,405 + Psest_2917 0.61 +0.5 3,110,405 + Psest_2917 0.61 +1.2 3,110,405 + Psest_2917 0.61 -1.6 3,110,405 + Psest_2917 0.61 -0.4 3,110,405 + Psest_2917 0.61 +1.4 3,110,405 + Psest_2917 0.61 -3.6 3,110,405 + Psest_2917 0.61 +1.6 3,110,406 - Psest_2917 0.61 -0.5 3,110,406 - Psest_2917 0.61 +0.3 3,110,406 - Psest_2917 0.61 +1.2 3,110,741 - -0.1
Or see this region's nucleotide sequence