Experiment: Thallium(I) acetate 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2888 and Psest_2889 are separated by 257 nucleotides Psest_2889 and Psest_2890 are separated by 253 nucleotides
Psest_2888: Psest_2888 - Transcriptional activator of acetoin/glycerol metabolism, at 3,080,199 to 3,082,088
_2888
Psest_2889: Psest_2889 - Predicted flavoprotein involved in K+ transport, at 3,082,346 to 3,084,226
_2889
Psest_2890: Psest_2890 - diguanylate cyclase (GGDEF) domain, at 3,084,480 to 3,086,030
_2890
Position (kb)
3082
3083
3084
3085 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3081.403 kb on + strand, within Psest_2888 at 3081.403 kb on + strand, within Psest_2888 at 3081.403 kb on + strand, within Psest_2888 at 3081.404 kb on - strand, within Psest_2888 at 3081.404 kb on - strand, within Psest_2888 at 3081.404 kb on - strand, within Psest_2888 at 3082.176 kb on + strand at 3082.238 kb on + strand at 3082.321 kb on - strand at 3082.727 kb on + strand, within Psest_2889 at 3082.727 kb on + strand, within Psest_2889 at 3082.727 kb on + strand, within Psest_2889 at 3082.727 kb on + strand, within Psest_2889 at 3082.916 kb on + strand, within Psest_2889 at 3082.917 kb on - strand, within Psest_2889 at 3083.087 kb on + strand, within Psest_2889 at 3083.156 kb on + strand, within Psest_2889 at 3083.156 kb on + strand, within Psest_2889 at 3083.156 kb on + strand, within Psest_2889 at 3083.156 kb on + strand, within Psest_2889 at 3083.156 kb on + strand, within Psest_2889 at 3083.156 kb on + strand, within Psest_2889 at 3083.156 kb on + strand, within Psest_2889 at 3083.157 kb on - strand, within Psest_2889 at 3083.157 kb on - strand, within Psest_2889 at 3083.157 kb on - strand, within Psest_2889 at 3083.157 kb on - strand, within Psest_2889 at 3083.157 kb on - strand, within Psest_2889 at 3083.157 kb on - strand, within Psest_2889 at 3083.157 kb on - strand, within Psest_2889 at 3083.180 kb on + strand, within Psest_2889 at 3083.180 kb on + strand, within Psest_2889 at 3083.181 kb on - strand, within Psest_2889 at 3083.181 kb on - strand, within Psest_2889 at 3083.181 kb on - strand, within Psest_2889 at 3083.181 kb on - strand, within Psest_2889 at 3083.449 kb on + strand, within Psest_2889 at 3083.449 kb on + strand, within Psest_2889 at 3083.449 kb on + strand, within Psest_2889 at 3083.450 kb on - strand, within Psest_2889 at 3083.558 kb on + strand, within Psest_2889 at 3083.558 kb on + strand, within Psest_2889 at 3083.558 kb on + strand, within Psest_2889 at 3083.558 kb on + strand, within Psest_2889 at 3083.628 kb on - strand, within Psest_2889 at 3083.693 kb on + strand, within Psest_2889 at 3083.694 kb on - strand, within Psest_2889 at 3083.694 kb on - strand, within Psest_2889 at 3083.694 kb on - strand, within Psest_2889 at 3083.694 kb on - strand, within Psest_2889 at 3083.694 kb on - strand, within Psest_2889 at 3083.694 kb on - strand, within Psest_2889 at 3083.694 kb on - strand, within Psest_2889 at 3083.694 kb on - strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.762 kb on + strand, within Psest_2889 at 3083.763 kb on - strand, within Psest_2889 at 3083.763 kb on - strand, within Psest_2889 at 3083.763 kb on - strand, within Psest_2889 at 3083.763 kb on - strand, within Psest_2889 at 3083.763 kb on - strand, within Psest_2889 at 3083.763 kb on - strand, within Psest_2889 at 3083.763 kb on - strand, within Psest_2889 at 3083.763 kb on - strand, within Psest_2889 at 3083.784 kb on - strand, within Psest_2889 at 3083.786 kb on + strand, within Psest_2889 at 3083.786 kb on + strand, within Psest_2889 at 3083.786 kb on + strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.787 kb on - strand, within Psest_2889 at 3083.887 kb on - strand, within Psest_2889 at 3084.134 kb on + strand at 3084.134 kb on + strand at 3084.134 kb on + strand at 3084.143 kb on + strand at 3084.143 kb on + strand at 3084.143 kb on + strand at 3084.143 kb on + strand at 3084.144 kb on - strand at 3084.185 kb on - strand at 3084.194 kb on + strand at 3084.194 kb on + strand at 3084.194 kb on + strand at 3084.195 kb on - strand at 3084.195 kb on - strand at 3084.388 kb on + strand at 3084.496 kb on + strand at 3084.497 kb on - strand at 3084.567 kb on + strand at 3084.621 kb on + strand at 3084.622 kb on - strand at 3084.913 kb on - strand, within Psest_2890 at 3084.933 kb on + strand, within Psest_2890 at 3084.933 kb on + strand, within Psest_2890 at 3084.934 kb on - strand, within Psest_2890 at 3084.934 kb on - strand, within Psest_2890 at 3084.979 kb on - strand, within Psest_2890 at 3084.990 kb on - strand, within Psest_2890 at 3085.050 kb on + strand, within Psest_2890 at 3085.051 kb on - strand, within Psest_2890 at 3085.051 kb on - strand, within Psest_2890 at 3085.051 kb on - strand, within Psest_2890 at 3085.068 kb on + strand, within Psest_2890 at 3085.069 kb on - strand, within Psest_2890 at 3085.069 kb on - strand, within Psest_2890 at 3085.074 kb on + strand, within Psest_2890 at 3085.074 kb on + strand, within Psest_2890 at 3085.074 kb on + strand, within Psest_2890 at 3085.074 kb on + strand, within Psest_2890 at 3085.074 kb on + strand, within Psest_2890 at 3085.074 kb on + strand, within Psest_2890 at 3085.074 kb on + strand, within Psest_2890 at 3085.074 kb on + strand, within Psest_2890 at 3085.074 kb on + strand, within Psest_2890 at 3085.075 kb on - strand, within Psest_2890 at 3085.075 kb on - strand, within Psest_2890 at 3085.075 kb on - strand, within Psest_2890 at 3085.075 kb on - strand, within Psest_2890 at 3085.075 kb on - strand, within Psest_2890 at 3085.075 kb on - strand, within Psest_2890 at 3085.075 kb on - strand, within Psest_2890 at 3085.138 kb on + strand, within Psest_2890 at 3085.203 kb on - strand, within Psest_2890 at 3085.203 kb on - strand, within Psest_2890
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.08 mg/ml remove 3,081,403 + Psest_2888 0.64 +0.0 3,081,403 + Psest_2888 0.64 +0.0 3,081,403 + Psest_2888 0.64 -0.4 3,081,404 - Psest_2888 0.64 -0.8 3,081,404 - Psest_2888 0.64 -0.7 3,081,404 - Psest_2888 0.64 -1.5 3,082,176 + -0.6 3,082,238 + -1.4 3,082,321 - -1.4 3,082,727 + Psest_2889 0.20 -1.1 3,082,727 + Psest_2889 0.20 +0.5 3,082,727 + Psest_2889 0.20 -0.4 3,082,727 + Psest_2889 0.20 +1.7 3,082,916 + Psest_2889 0.30 -1.0 3,082,917 - Psest_2889 0.30 +0.6 3,083,087 + Psest_2889 0.39 -0.4 3,083,156 + Psest_2889 0.43 +0.3 3,083,156 + Psest_2889 0.43 -0.2 3,083,156 + Psest_2889 0.43 +0.2 3,083,156 + Psest_2889 0.43 -0.1 3,083,156 + Psest_2889 0.43 -1.0 3,083,156 + Psest_2889 0.43 +0.4 3,083,156 + Psest_2889 0.43 +0.3 3,083,157 - Psest_2889 0.43 -0.3 3,083,157 - Psest_2889 0.43 +0.5 3,083,157 - Psest_2889 0.43 +0.5 3,083,157 - Psest_2889 0.43 -0.9 3,083,157 - Psest_2889 0.43 +0.0 3,083,157 - Psest_2889 0.43 -0.2 3,083,157 - Psest_2889 0.43 +0.5 3,083,180 + Psest_2889 0.44 +0.8 3,083,180 + Psest_2889 0.44 -0.2 3,083,181 - Psest_2889 0.44 -2.2 3,083,181 - Psest_2889 0.44 +0.4 3,083,181 - Psest_2889 0.44 +0.5 3,083,181 - Psest_2889 0.44 -0.6 3,083,449 + Psest_2889 0.59 -0.0 3,083,449 + Psest_2889 0.59 -0.1 3,083,449 + Psest_2889 0.59 +0.7 3,083,450 - Psest_2889 0.59 +0.1 3,083,558 + Psest_2889 0.64 +0.4 3,083,558 + Psest_2889 0.64 +0.5 3,083,558 + Psest_2889 0.64 +1.1 3,083,558 + Psest_2889 0.64 -1.6 3,083,628 - Psest_2889 0.68 +0.1 3,083,693 + Psest_2889 0.72 +0.0 3,083,694 - Psest_2889 0.72 -1.4 3,083,694 - Psest_2889 0.72 +0.2 3,083,694 - Psest_2889 0.72 -3.3 3,083,694 - Psest_2889 0.72 -0.1 3,083,694 - Psest_2889 0.72 +0.9 3,083,694 - Psest_2889 0.72 +0.9 3,083,694 - Psest_2889 0.72 +0.6 3,083,694 - Psest_2889 0.72 -0.4 3,083,762 + Psest_2889 0.75 -0.6 3,083,762 + Psest_2889 0.75 -0.4 3,083,762 + Psest_2889 0.75 +1.2 3,083,762 + Psest_2889 0.75 -1.9 3,083,762 + Psest_2889 0.75 -0.4 3,083,762 + Psest_2889 0.75 -1.6 3,083,762 + Psest_2889 0.75 -0.1 3,083,762 + Psest_2889 0.75 -0.9 3,083,762 + Psest_2889 0.75 +0.5 3,083,762 + Psest_2889 0.75 -1.0 3,083,762 + Psest_2889 0.75 +2.9 3,083,762 + Psest_2889 0.75 +1.8 3,083,762 + Psest_2889 0.75 +0.7 3,083,762 + Psest_2889 0.75 -2.4 3,083,762 + Psest_2889 0.75 -0.5 3,083,762 + Psest_2889 0.75 -1.3 3,083,762 + Psest_2889 0.75 +0.6 3,083,763 - Psest_2889 0.75 -0.2 3,083,763 - Psest_2889 0.75 -0.9 3,083,763 - Psest_2889 0.75 -0.0 3,083,763 - Psest_2889 0.75 -1.2 3,083,763 - Psest_2889 0.75 +0.0 3,083,763 - Psest_2889 0.75 -0.1 3,083,763 - Psest_2889 0.75 +0.5 3,083,763 - Psest_2889 0.75 -1.1 3,083,784 - Psest_2889 0.76 -0.2 3,083,786 + Psest_2889 0.77 +0.5 3,083,786 + Psest_2889 0.77 -1.2 3,083,786 + Psest_2889 0.77 +0.9 3,083,787 - Psest_2889 0.77 -1.3 3,083,787 - Psest_2889 0.77 -0.8 3,083,787 - Psest_2889 0.77 -0.1 3,083,787 - Psest_2889 0.77 -0.2 3,083,787 - Psest_2889 0.77 -1.2 3,083,787 - Psest_2889 0.77 -0.8 3,083,787 - Psest_2889 0.77 -0.1 3,083,787 - Psest_2889 0.77 +1.0 3,083,787 - Psest_2889 0.77 -0.9 3,083,787 - Psest_2889 0.77 -1.4 3,083,887 - Psest_2889 0.82 -2.4 3,084,134 + +0.0 3,084,134 + -0.9 3,084,134 + +0.9 3,084,143 + +0.2 3,084,143 + +0.4 3,084,143 + +0.2 3,084,143 + -0.4 3,084,144 - -0.1 3,084,185 - +1.7 3,084,194 + +0.4 3,084,194 + -0.3 3,084,194 + +0.1 3,084,195 - +0.3 3,084,195 - +0.4 3,084,388 + -0.7 3,084,496 + -0.3 3,084,497 - -0.7 3,084,567 + -2.2 3,084,621 + -2.1 3,084,622 - +0.7 3,084,913 - Psest_2890 0.28 -0.6 3,084,933 + Psest_2890 0.29 -1.5 3,084,933 + Psest_2890 0.29 +1.8 3,084,934 - Psest_2890 0.29 +0.3 3,084,934 - Psest_2890 0.29 -3.0 3,084,979 - Psest_2890 0.32 +1.0 3,084,990 - Psest_2890 0.33 +0.1 3,085,050 + Psest_2890 0.37 +0.5 3,085,051 - Psest_2890 0.37 -0.8 3,085,051 - Psest_2890 0.37 +1.4 3,085,051 - Psest_2890 0.37 +1.3 3,085,068 + Psest_2890 0.38 -2.1 3,085,069 - Psest_2890 0.38 +2.5 3,085,069 - Psest_2890 0.38 -0.1 3,085,074 + Psest_2890 0.38 -0.7 3,085,074 + Psest_2890 0.38 -1.1 3,085,074 + Psest_2890 0.38 -1.9 3,085,074 + Psest_2890 0.38 -0.3 3,085,074 + Psest_2890 0.38 -1.4 3,085,074 + Psest_2890 0.38 -0.1 3,085,074 + Psest_2890 0.38 +0.5 3,085,074 + Psest_2890 0.38 +2.4 3,085,074 + Psest_2890 0.38 +1.5 3,085,075 - Psest_2890 0.38 +1.7 3,085,075 - Psest_2890 0.38 -1.8 3,085,075 - Psest_2890 0.38 +0.0 3,085,075 - Psest_2890 0.38 -1.7 3,085,075 - Psest_2890 0.38 -0.2 3,085,075 - Psest_2890 0.38 +0.9 3,085,075 - Psest_2890 0.38 -0.2 3,085,138 + Psest_2890 0.42 +0.2 3,085,203 - Psest_2890 0.47 +0.6 3,085,203 - Psest_2890 0.47 +0.6
Or see this region's nucleotide sequence