Experiment: Thallium(I) acetate 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0188 and Psest_0189 are separated by 112 nucleotides Psest_0189 and Psest_0190 are separated by 2 nucleotides Psest_0190 and Psest_0191 are separated by 21 nucleotides
Psest_0188: Psest_0188 - diguanylate cyclase (GGDEF) domain, at 183,244 to 185,142
_0188
Psest_0189: Psest_0189 - Negative regulator of beta-lactamase expression, at 185,255 to 186,043
_0189
Psest_0190: Psest_0190 - Uncharacterized conserved protein, at 186,046 to 186,450
_0190
Psest_0191: Psest_0191 - PAS domain S-box, at 186,472 to 188,259
_0191
Position (kb) 186
187 Strain fitness (log2 ratio) -2
-1
0
1
2 at 185.178 kb on - strand at 185.332 kb on + strand at 185.332 kb on + strand at 185.332 kb on + strand at 185.332 kb on + strand at 185.332 kb on + strand at 185.332 kb on + strand at 185.333 kb on - strand at 185.333 kb on - strand at 185.333 kb on - strand at 185.333 kb on - strand at 185.333 kb on - strand at 185.333 kb on - strand at 185.378 kb on + strand, within Psest_0189 at 185.378 kb on + strand, within Psest_0189 at 185.378 kb on + strand, within Psest_0189 at 185.378 kb on + strand, within Psest_0189 at 185.378 kb on + strand, within Psest_0189 at 185.379 kb on - strand, within Psest_0189 at 185.379 kb on - strand, within Psest_0189 at 185.379 kb on - strand, within Psest_0189 at 185.379 kb on - strand, within Psest_0189 at 185.379 kb on - strand, within Psest_0189 at 185.379 kb on - strand, within Psest_0189 at 185.379 kb on - strand, within Psest_0189 at 185.379 kb on - strand, within Psest_0189 at 185.379 kb on - strand, within Psest_0189 at 185.442 kb on - strand, within Psest_0189 at 185.442 kb on - strand, within Psest_0189 at 185.864 kb on + strand, within Psest_0189 at 185.961 kb on - strand, within Psest_0189 at 186.051 kb on - strand at 186.293 kb on + strand, within Psest_0190 at 186.293 kb on + strand, within Psest_0190 at 186.354 kb on + strand, within Psest_0190 at 186.356 kb on + strand, within Psest_0190 at 186.356 kb on + strand, within Psest_0190 at 186.356 kb on + strand, within Psest_0190 at 186.491 kb on + strand at 186.491 kb on + strand at 186.491 kb on + strand at 186.491 kb on + strand at 186.492 kb on - strand at 186.492 kb on - strand at 186.492 kb on - strand at 186.492 kb on - strand at 186.492 kb on - strand at 186.492 kb on - strand at 186.492 kb on - strand at 186.492 kb on - strand at 186.492 kb on - strand at 186.565 kb on + strand at 186.645 kb on - strand at 186.735 kb on + strand, within Psest_0191
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.08 mg/ml remove 185,178 - -0.8 185,332 + +0.9 185,332 + -1.6 185,332 + +1.6 185,332 + +0.8 185,332 + -0.5 185,332 + -0.7 185,333 - +1.4 185,333 - -0.3 185,333 - -1.2 185,333 - -0.0 185,333 - -0.0 185,333 - +0.8 185,378 + Psest_0189 0.16 -0.5 185,378 + Psest_0189 0.16 -0.2 185,378 + Psest_0189 0.16 +0.7 185,378 + Psest_0189 0.16 -0.9 185,378 + Psest_0189 0.16 -0.3 185,379 - Psest_0189 0.16 -1.0 185,379 - Psest_0189 0.16 +0.7 185,379 - Psest_0189 0.16 +0.2 185,379 - Psest_0189 0.16 -0.9 185,379 - Psest_0189 0.16 -0.3 185,379 - Psest_0189 0.16 +0.9 185,379 - Psest_0189 0.16 +1.0 185,379 - Psest_0189 0.16 +0.7 185,379 - Psest_0189 0.16 -1.4 185,442 - Psest_0189 0.24 +0.1 185,442 - Psest_0189 0.24 -0.9 185,864 + Psest_0189 0.77 -2.1 185,961 - Psest_0189 0.89 -0.8 186,051 - +1.6 186,293 + Psest_0190 0.61 +0.2 186,293 + Psest_0190 0.61 +0.4 186,354 + Psest_0190 0.76 +0.9 186,356 + Psest_0190 0.77 +1.8 186,356 + Psest_0190 0.77 +1.1 186,356 + Psest_0190 0.77 +2.7 186,491 + +1.5 186,491 + -0.8 186,491 + +0.4 186,491 + -1.2 186,492 - +0.7 186,492 - +0.2 186,492 - -2.3 186,492 - +1.2 186,492 - +1.4 186,492 - +2.5 186,492 - +0.2 186,492 - +0.4 186,492 - -2.2 186,565 + +0.7 186,645 - -0.9 186,735 + Psest_0191 0.15 +0.5
Or see this region's nucleotide sequence