Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0680 and Psest_0681 overlap by 4 nucleotides Psest_0681 and Psest_0682 are separated by 82 nucleotides
Psest_0680: Psest_0680 - N-acetylmuramoyl-L-alanine amidase, at 742,290 to 743,726
_0680
Psest_0681: Psest_0681 - DNA mismatch repair protein MutL, at 743,723 to 745,600
_0681
Psest_0682: Psest_0682 - tRNA dimethylallyltransferase, at 745,683 to 746,654
_0682
Position (kb) 743
744
745
746 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 743.521 kb on - strand, within Psest_0680 at 743.920 kb on + strand, within Psest_0681 at 744.174 kb on + strand, within Psest_0681 at 744.174 kb on + strand, within Psest_0681 at 744.194 kb on - strand, within Psest_0681 at 744.494 kb on + strand, within Psest_0681 at 744.494 kb on + strand, within Psest_0681 at 744.494 kb on + strand, within Psest_0681 at 744.495 kb on - strand, within Psest_0681 at 744.495 kb on - strand, within Psest_0681 at 744.500 kb on + strand, within Psest_0681 at 744.500 kb on + strand, within Psest_0681 at 744.500 kb on + strand, within Psest_0681 at 744.500 kb on + strand, within Psest_0681 at 744.501 kb on - strand, within Psest_0681 at 745.058 kb on + strand, within Psest_0681 at 745.058 kb on + strand, within Psest_0681 at 745.058 kb on + strand, within Psest_0681 at 745.058 kb on + strand, within Psest_0681 at 745.058 kb on + strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.060 kb on + strand, within Psest_0681 at 745.060 kb on + strand, within Psest_0681 at 745.100 kb on - strand, within Psest_0681 at 745.128 kb on - strand, within Psest_0681 at 745.376 kb on + strand, within Psest_0681 at 745.376 kb on + strand, within Psest_0681 at 745.376 kb on + strand, within Psest_0681 at 745.377 kb on - strand, within Psest_0681 at 745.416 kb on + strand at 745.498 kb on + strand at 745.657 kb on - strand at 745.657 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 743,521 - Psest_0680 0.86 -0.4 743,920 + Psest_0681 0.10 -0.5 744,174 + Psest_0681 0.24 -1.3 744,174 + Psest_0681 0.24 -1.1 744,194 - Psest_0681 0.25 -1.8 744,494 + Psest_0681 0.41 -0.0 744,494 + Psest_0681 0.41 +0.6 744,494 + Psest_0681 0.41 -1.4 744,495 - Psest_0681 0.41 -0.4 744,495 - Psest_0681 0.41 +0.7 744,500 + Psest_0681 0.41 +0.9 744,500 + Psest_0681 0.41 +1.0 744,500 + Psest_0681 0.41 +0.2 744,500 + Psest_0681 0.41 -1.4 744,501 - Psest_0681 0.41 -1.1 745,058 + Psest_0681 0.71 -0.7 745,058 + Psest_0681 0.71 -1.0 745,058 + Psest_0681 0.71 -1.4 745,058 + Psest_0681 0.71 +0.1 745,058 + Psest_0681 0.71 +1.1 745,059 - Psest_0681 0.71 -1.5 745,059 - Psest_0681 0.71 +3.0 745,059 - Psest_0681 0.71 +0.1 745,059 - Psest_0681 0.71 +0.8 745,059 - Psest_0681 0.71 -0.9 745,059 - Psest_0681 0.71 -2.6 745,059 - Psest_0681 0.71 +1.8 745,059 - Psest_0681 0.71 +1.2 745,059 - Psest_0681 0.71 +0.1 745,059 - Psest_0681 0.71 +1.0 745,059 - Psest_0681 0.71 -3.5 745,059 - Psest_0681 0.71 +0.9 745,059 - Psest_0681 0.71 -0.9 745,059 - Psest_0681 0.71 +0.2 745,060 + Psest_0681 0.71 -1.3 745,060 + Psest_0681 0.71 -0.8 745,100 - Psest_0681 0.73 +0.2 745,128 - Psest_0681 0.75 -0.8 745,376 + Psest_0681 0.88 +0.8 745,376 + Psest_0681 0.88 -1.1 745,376 + Psest_0681 0.88 +0.3 745,377 - Psest_0681 0.88 +0.2 745,416 + -1.8 745,498 + +0.3 745,657 - +1.0 745,657 - +0.4
Or see this region's nucleotide sequence