Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16745

Experiment: RCH2_defined_1percent_glucose with Chloride 600 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS16740 and BWI76_RS16745 are separated by 106 nucleotidesBWI76_RS16745 and BWI76_RS16750 are separated by 10 nucleotides BWI76_RS16740: BWI76_RS16740 - transcriptional regulator, at 3,467,493 to 3,468,365 _RS16740 BWI76_RS16745: BWI76_RS16745 - alpha-acetolactate decarboxylase, at 3,468,472 to 3,469,251 _RS16745 BWI76_RS16750: BWI76_RS16750 - acetolactate synthase, at 3,469,262 to 3,470,941 _RS16750 Position (kb) 3468 3469 3470Strain fitness (log2 ratio) -1 0 1 2at 3467.542 kb on - strandat 3467.583 kb on - strand, within BWI76_RS16740at 3467.764 kb on - strand, within BWI76_RS16740at 3468.038 kb on + strand, within BWI76_RS16740at 3468.038 kb on + strand, within BWI76_RS16740at 3468.205 kb on - strandat 3468.518 kb on - strandat 3468.524 kb on - strandat 3468.549 kb on - strandat 3468.559 kb on + strand, within BWI76_RS16745at 3468.576 kb on - strand, within BWI76_RS16745at 3468.576 kb on - strand, within BWI76_RS16745at 3468.585 kb on + strand, within BWI76_RS16745at 3468.585 kb on + strand, within BWI76_RS16745at 3468.800 kb on + strand, within BWI76_RS16745at 3469.030 kb on - strand, within BWI76_RS16745at 3469.079 kb on + strand, within BWI76_RS16745at 3469.307 kb on - strandat 3469.523 kb on - strand, within BWI76_RS16750at 3469.701 kb on - strand, within BWI76_RS16750at 3469.998 kb on - strand, within BWI76_RS16750

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_1percent_glucose with Chloride 600 mM
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3,467,542 - +0.1
3,467,583 - BWI76_RS16740 0.10 +1.0
3,467,764 - BWI76_RS16740 0.31 -0.8
3,468,038 + BWI76_RS16740 0.62 +0.6
3,468,038 + BWI76_RS16740 0.62 +0.8
3,468,205 - -0.0
3,468,518 - +0.6
3,468,524 - +2.0
3,468,549 - +0.8
3,468,559 + BWI76_RS16745 0.11 +0.0
3,468,576 - BWI76_RS16745 0.13 -0.8
3,468,576 - BWI76_RS16745 0.13 +1.3
3,468,585 + BWI76_RS16745 0.14 +1.7
3,468,585 + BWI76_RS16745 0.14 +1.1
3,468,800 + BWI76_RS16745 0.42 -1.2
3,469,030 - BWI76_RS16745 0.72 +1.5
3,469,079 + BWI76_RS16745 0.78 +0.5
3,469,307 - -0.1
3,469,523 - BWI76_RS16750 0.16 -1.0
3,469,701 - BWI76_RS16750 0.26 -0.9
3,469,998 - BWI76_RS16750 0.44 -1.3

Or see this region's nucleotide sequence