Experiment: RCH2_defined_1percent_glucose with Chloride 600 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13535 and BWI76_RS13540 are separated by 15 nucleotides BWI76_RS13540 and BWI76_RS13545 are separated by 11 nucleotides BWI76_RS13545 and BWI76_RS13550 are separated by 9 nucleotides
BWI76_RS13535: BWI76_RS13535 - LLM class flavin-dependent oxidoreductase, at 2,822,196 to 2,823,512
_RS13535
BWI76_RS13540: BWI76_RS13540 - ABC transporter substrate-binding protein, at 2,823,528 to 2,824,469
_RS13540
BWI76_RS13545: BWI76_RS13545 - N-acetyltransferase, at 2,824,481 to 2,824,990
_RS13545
BWI76_RS13550: BWI76_RS13550 - polar amino acid ABC transporter inner membrane subunit, at 2,825,000 to 2,825,926
_RS13550
Position (kb)
2823
2824
2825 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2822.538 kb on + strand, within BWI76_RS13535 at 2822.567 kb on - strand, within BWI76_RS13535 at 2822.567 kb on - strand, within BWI76_RS13535 at 2822.568 kb on + strand, within BWI76_RS13535 at 2822.583 kb on - strand, within BWI76_RS13535 at 2822.591 kb on - strand, within BWI76_RS13535 at 2822.595 kb on + strand, within BWI76_RS13535 at 2822.595 kb on + strand, within BWI76_RS13535 at 2822.616 kb on + strand, within BWI76_RS13535 at 2822.624 kb on + strand at 2822.626 kb on + strand, within BWI76_RS13535 at 2822.626 kb on + strand, within BWI76_RS13535 at 2822.626 kb on + strand, within BWI76_RS13535 at 2822.634 kb on - strand, within BWI76_RS13535 at 2822.636 kb on + strand, within BWI76_RS13535 at 2822.644 kb on - strand, within BWI76_RS13535 at 2822.670 kb on + strand, within BWI76_RS13535 at 2822.670 kb on + strand, within BWI76_RS13535 at 2822.670 kb on + strand, within BWI76_RS13535 at 2822.670 kb on + strand, within BWI76_RS13535 at 2822.670 kb on + strand, within BWI76_RS13535 at 2822.670 kb on + strand, within BWI76_RS13535 at 2822.676 kb on + strand, within BWI76_RS13535 at 2822.677 kb on - strand, within BWI76_RS13535 at 2822.678 kb on - strand, within BWI76_RS13535 at 2822.678 kb on - strand, within BWI76_RS13535 at 2822.678 kb on - strand, within BWI76_RS13535 at 2822.678 kb on - strand, within BWI76_RS13535 at 2822.678 kb on - strand, within BWI76_RS13535 at 2822.678 kb on - strand, within BWI76_RS13535 at 2822.678 kb on - strand, within BWI76_RS13535 at 2822.678 kb on - strand, within BWI76_RS13535 at 2822.678 kb on - strand, within BWI76_RS13535 at 2822.679 kb on - strand, within BWI76_RS13535 at 2822.679 kb on - strand, within BWI76_RS13535 at 2822.681 kb on + strand, within BWI76_RS13535 at 2822.684 kb on + strand, within BWI76_RS13535 at 2822.689 kb on + strand, within BWI76_RS13535 at 2822.689 kb on + strand, within BWI76_RS13535 at 2822.689 kb on + strand, within BWI76_RS13535 at 2822.697 kb on - strand, within BWI76_RS13535 at 2822.723 kb on - strand, within BWI76_RS13535 at 2822.727 kb on + strand at 2822.735 kb on - strand, within BWI76_RS13535 at 2822.766 kb on - strand, within BWI76_RS13535 at 2822.817 kb on + strand, within BWI76_RS13535 at 2822.825 kb on - strand, within BWI76_RS13535 at 2822.825 kb on - strand, within BWI76_RS13535 at 2822.888 kb on - strand, within BWI76_RS13535 at 2822.895 kb on + strand, within BWI76_RS13535 at 2822.946 kb on + strand, within BWI76_RS13535 at 2822.971 kb on + strand, within BWI76_RS13535 at 2823.018 kb on - strand, within BWI76_RS13535 at 2823.018 kb on - strand, within BWI76_RS13535 at 2823.045 kb on - strand, within BWI76_RS13535 at 2823.059 kb on - strand, within BWI76_RS13535 at 2823.100 kb on - strand, within BWI76_RS13535 at 2823.182 kb on - strand, within BWI76_RS13535 at 2823.232 kb on + strand, within BWI76_RS13535 at 2823.333 kb on - strand, within BWI76_RS13535 at 2823.333 kb on - strand, within BWI76_RS13535 at 2823.414 kb on - strand at 2823.420 kb on - strand at 2823.469 kb on + strand at 2823.477 kb on - strand at 2823.477 kb on - strand at 2823.477 kb on - strand at 2823.477 kb on - strand at 2823.515 kb on - strand at 2823.781 kb on + strand, within BWI76_RS13540 at 2823.832 kb on + strand, within BWI76_RS13540 at 2823.881 kb on + strand, within BWI76_RS13540 at 2824.032 kb on + strand, within BWI76_RS13540 at 2824.100 kb on - strand, within BWI76_RS13540 at 2824.167 kb on + strand, within BWI76_RS13540 at 2824.175 kb on - strand, within BWI76_RS13540 at 2824.910 kb on + strand, within BWI76_RS13545 at 2825.210 kb on + strand, within BWI76_RS13550
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_1percent_glucose with Chloride 600 mM remove 2,822,538 + BWI76_RS13535 0.26 +2.5 2,822,567 - BWI76_RS13535 0.28 -0.3 2,822,567 - BWI76_RS13535 0.28 +1.1 2,822,568 + BWI76_RS13535 0.28 +0.7 2,822,583 - BWI76_RS13535 0.29 +1.1 2,822,591 - BWI76_RS13535 0.30 -1.2 2,822,595 + BWI76_RS13535 0.30 -0.3 2,822,595 + BWI76_RS13535 0.30 -0.9 2,822,616 + BWI76_RS13535 0.32 +0.0 2,822,624 + -0.5 2,822,626 + BWI76_RS13535 0.33 +0.4 2,822,626 + BWI76_RS13535 0.33 +0.8 2,822,626 + BWI76_RS13535 0.33 +0.4 2,822,634 - BWI76_RS13535 0.33 -1.1 2,822,636 + BWI76_RS13535 0.33 +2.1 2,822,644 - BWI76_RS13535 0.34 -0.3 2,822,670 + BWI76_RS13535 0.36 -1.1 2,822,670 + BWI76_RS13535 0.36 -0.6 2,822,670 + BWI76_RS13535 0.36 -1.2 2,822,670 + BWI76_RS13535 0.36 -0.3 2,822,670 + BWI76_RS13535 0.36 +0.1 2,822,670 + BWI76_RS13535 0.36 -2.1 2,822,676 + BWI76_RS13535 0.36 +0.1 2,822,677 - BWI76_RS13535 0.37 +0.5 2,822,678 - BWI76_RS13535 0.37 +2.2 2,822,678 - BWI76_RS13535 0.37 +3.7 2,822,678 - BWI76_RS13535 0.37 +1.0 2,822,678 - BWI76_RS13535 0.37 -0.2 2,822,678 - BWI76_RS13535 0.37 -0.8 2,822,678 - BWI76_RS13535 0.37 +0.6 2,822,678 - BWI76_RS13535 0.37 +0.3 2,822,678 - BWI76_RS13535 0.37 -0.4 2,822,678 - BWI76_RS13535 0.37 +1.1 2,822,679 - BWI76_RS13535 0.37 +0.6 2,822,679 - BWI76_RS13535 0.37 -0.6 2,822,681 + BWI76_RS13535 0.37 +2.1 2,822,684 + BWI76_RS13535 0.37 +0.1 2,822,689 + BWI76_RS13535 0.37 +0.1 2,822,689 + BWI76_RS13535 0.37 -1.1 2,822,689 + BWI76_RS13535 0.37 -0.9 2,822,697 - BWI76_RS13535 0.38 -1.2 2,822,723 - BWI76_RS13535 0.40 -1.1 2,822,727 + +1.5 2,822,735 - BWI76_RS13535 0.41 +0.6 2,822,766 - BWI76_RS13535 0.43 -0.6 2,822,817 + BWI76_RS13535 0.47 -0.2 2,822,825 - BWI76_RS13535 0.48 +0.5 2,822,825 - BWI76_RS13535 0.48 +0.4 2,822,888 - BWI76_RS13535 0.53 +0.0 2,822,895 + BWI76_RS13535 0.53 -1.4 2,822,946 + BWI76_RS13535 0.57 -0.5 2,822,971 + BWI76_RS13535 0.59 -0.4 2,823,018 - BWI76_RS13535 0.62 -0.2 2,823,018 - BWI76_RS13535 0.62 +0.6 2,823,045 - BWI76_RS13535 0.64 +0.3 2,823,059 - BWI76_RS13535 0.66 +0.0 2,823,100 - BWI76_RS13535 0.69 -0.2 2,823,182 - BWI76_RS13535 0.75 +0.1 2,823,232 + BWI76_RS13535 0.79 +0.0 2,823,333 - BWI76_RS13535 0.86 +0.0 2,823,333 - BWI76_RS13535 0.86 -1.4 2,823,414 - +0.9 2,823,420 - +0.5 2,823,469 + +0.0 2,823,477 - -0.1 2,823,477 - +0.2 2,823,477 - -0.1 2,823,477 - +2.4 2,823,515 - -0.5 2,823,781 + BWI76_RS13540 0.27 -0.4 2,823,832 + BWI76_RS13540 0.32 -0.7 2,823,881 + BWI76_RS13540 0.37 -0.6 2,824,032 + BWI76_RS13540 0.54 +1.0 2,824,100 - BWI76_RS13540 0.61 -2.4 2,824,167 + BWI76_RS13540 0.68 +0.6 2,824,175 - BWI76_RS13540 0.69 +0.3 2,824,910 + BWI76_RS13545 0.84 -0.8 2,825,210 + BWI76_RS13550 0.23 -0.4
Or see this region's nucleotide sequence