Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS02570

Experiment: RCH2_defined_1percent_glucose with Chloride 600 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS02565 and BWI76_RS02570 are separated by 151 nucleotidesBWI76_RS02570 and BWI76_RS02575 are separated by 37 nucleotides BWI76_RS02565: BWI76_RS02565 - adenylosuccinate synthase, at 524,823 to 526,121 _RS02565 BWI76_RS02570: BWI76_RS02570 - transcriptional regulator, at 526,273 to 526,698 _RS02570 BWI76_RS02575: BWI76_RS02575 - exoribonuclease R, at 526,736 to 529,183 _RS02575 Position (kb) 526 527Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 526.147 kb on - strandat 526.246 kb on + strandat 526.319 kb on + strand, within BWI76_RS02570at 526.322 kb on - strand, within BWI76_RS02570at 526.429 kb on + strand, within BWI76_RS02570at 526.429 kb on + strand, within BWI76_RS02570at 526.437 kb on - strand, within BWI76_RS02570at 526.437 kb on - strand, within BWI76_RS02570at 526.460 kb on + strand, within BWI76_RS02570at 526.517 kb on + strand, within BWI76_RS02570at 526.580 kb on + strand, within BWI76_RS02570at 526.635 kb on + strand, within BWI76_RS02570at 526.715 kb on + strandat 526.785 kb on - strandat 526.864 kb on + strandat 526.977 kb on + strandat 526.985 kb on - strand, within BWI76_RS02575at 526.987 kb on + strand, within BWI76_RS02575at 527.269 kb on - strand, within BWI76_RS02575at 527.439 kb on + strand, within BWI76_RS02575at 527.519 kb on + strand, within BWI76_RS02575at 527.519 kb on + strand, within BWI76_RS02575at 527.587 kb on - strand, within BWI76_RS02575

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_1percent_glucose with Chloride 600 mM
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526,147 - +1.2
526,246 + -1.5
526,319 + BWI76_RS02570 0.11 -1.5
526,322 - BWI76_RS02570 0.12 -1.5
526,429 + BWI76_RS02570 0.37 -1.8
526,429 + BWI76_RS02570 0.37 -4.3
526,437 - BWI76_RS02570 0.38 -1.3
526,437 - BWI76_RS02570 0.38 -0.2
526,460 + BWI76_RS02570 0.44 -2.2
526,517 + BWI76_RS02570 0.57 -0.9
526,580 + BWI76_RS02570 0.72 -1.5
526,635 + BWI76_RS02570 0.85 -1.9
526,715 + +0.2
526,785 - +1.6
526,864 + +0.2
526,977 + -0.1
526,985 - BWI76_RS02575 0.10 +0.0
526,987 + BWI76_RS02575 0.10 +0.4
527,269 - BWI76_RS02575 0.22 +0.5
527,439 + BWI76_RS02575 0.29 -0.1
527,519 + BWI76_RS02575 0.32 -0.7
527,519 + BWI76_RS02575 0.32 +0.5
527,587 - BWI76_RS02575 0.35 +0.3

Or see this region's nucleotide sequence