Experiment: Cobalt chloride 0.07 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3291 and Psest_3292 are separated by 8 nucleotides Psest_3292 and Psest_3293 are separated by 136 nucleotides
Psest_3291: Psest_3291 - Lipid A core - O-antigen ligase and related enzymes, at 3,456,711 to 3,458,168
_3291
Psest_3292: Psest_3292 - hypothetical protein, at 3,458,177 to 3,458,914
_3292
Psest_3293: Psest_3293 - sulfate adenylyltransferase, large subunit, at 3,459,051 to 3,460,949
_3293
Position (kb)
3458
3459 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3457.191 kb on + strand, within Psest_3291 at 3457.191 kb on + strand, within Psest_3291 at 3457.196 kb on - strand, within Psest_3291 at 3457.196 kb on - strand, within Psest_3291 at 3457.196 kb on - strand, within Psest_3291 at 3457.243 kb on - strand, within Psest_3291 at 3457.435 kb on + strand, within Psest_3291 at 3457.435 kb on + strand, within Psest_3291 at 3457.435 kb on + strand, within Psest_3291 at 3457.490 kb on - strand, within Psest_3291 at 3457.499 kb on - strand, within Psest_3291 at 3457.528 kb on - strand, within Psest_3291 at 3457.577 kb on + strand, within Psest_3291 at 3457.577 kb on + strand, within Psest_3291 at 3457.577 kb on + strand, within Psest_3291 at 3457.578 kb on - strand, within Psest_3291 at 3457.603 kb on + strand, within Psest_3291 at 3457.603 kb on + strand, within Psest_3291 at 3457.603 kb on + strand, within Psest_3291 at 3457.603 kb on + strand, within Psest_3291 at 3457.604 kb on - strand, within Psest_3291 at 3457.604 kb on - strand, within Psest_3291 at 3457.604 kb on - strand, within Psest_3291 at 3457.604 kb on - strand, within Psest_3291 at 3457.607 kb on + strand, within Psest_3291 at 3457.607 kb on + strand, within Psest_3291 at 3457.607 kb on + strand, within Psest_3291 at 3457.607 kb on + strand, within Psest_3291 at 3457.607 kb on + strand, within Psest_3291 at 3457.608 kb on - strand, within Psest_3291 at 3457.608 kb on - strand, within Psest_3291 at 3457.608 kb on - strand, within Psest_3291 at 3457.608 kb on - strand, within Psest_3291 at 3457.683 kb on + strand, within Psest_3291 at 3457.683 kb on + strand, within Psest_3291 at 3457.683 kb on + strand, within Psest_3291 at 3457.684 kb on - strand, within Psest_3291 at 3457.694 kb on - strand, within Psest_3291 at 3457.784 kb on + strand, within Psest_3291 at 3457.785 kb on - strand, within Psest_3291 at 3457.785 kb on - strand, within Psest_3291 at 3457.787 kb on - strand, within Psest_3291 at 3457.787 kb on - strand, within Psest_3291 at 3457.787 kb on - strand, within Psest_3291 at 3457.829 kb on + strand, within Psest_3291 at 3457.838 kb on - strand, within Psest_3291 at 3457.838 kb on - strand, within Psest_3291 at 3457.916 kb on + strand, within Psest_3291 at 3457.938 kb on - strand, within Psest_3291 at 3458.036 kb on - strand at 3458.122 kb on + strand at 3458.122 kb on + strand at 3458.122 kb on + strand at 3458.175 kb on - strand at 3458.175 kb on - strand at 3458.175 kb on - strand at 3458.176 kb on + strand at 3458.176 kb on + strand at 3458.176 kb on + strand at 3458.177 kb on - strand at 3458.177 kb on - strand at 3458.177 kb on - strand at 3458.177 kb on - strand at 3458.177 kb on - strand at 3458.177 kb on - strand at 3458.322 kb on + strand, within Psest_3292 at 3458.325 kb on + strand, within Psest_3292 at 3458.337 kb on + strand, within Psest_3292 at 3458.338 kb on - strand, within Psest_3292 at 3458.441 kb on + strand, within Psest_3292 at 3458.442 kb on - strand, within Psest_3292 at 3458.759 kb on + strand, within Psest_3292 at 3458.759 kb on + strand, within Psest_3292 at 3458.760 kb on - strand, within Psest_3292 at 3458.798 kb on + strand, within Psest_3292 at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.883 kb on + strand at 3458.884 kb on - strand at 3458.884 kb on - strand at 3458.884 kb on - strand at 3458.884 kb on - strand at 3458.884 kb on - strand at 3458.884 kb on - strand at 3458.884 kb on - strand at 3458.884 kb on - strand at 3458.912 kb on + strand at 3458.912 kb on + strand at 3458.913 kb on - strand at 3459.052 kb on + strand at 3459.052 kb on + strand at 3459.053 kb on - strand at 3459.053 kb on - strand at 3459.053 kb on - strand at 3459.073 kb on - strand at 3459.073 kb on - strand at 3459.073 kb on - strand at 3459.073 kb on - strand at 3459.251 kb on - strand, within Psest_3293
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.07 mM remove 3,457,191 + Psest_3291 0.33 +0.2 3,457,191 + Psest_3291 0.33 -0.2 3,457,196 - Psest_3291 0.33 +1.1 3,457,196 - Psest_3291 0.33 +0.6 3,457,196 - Psest_3291 0.33 +0.2 3,457,243 - Psest_3291 0.36 +0.7 3,457,435 + Psest_3291 0.50 -1.4 3,457,435 + Psest_3291 0.50 +0.6 3,457,435 + Psest_3291 0.50 +1.8 3,457,490 - Psest_3291 0.53 +0.2 3,457,499 - Psest_3291 0.54 +0.7 3,457,528 - Psest_3291 0.56 -0.6 3,457,577 + Psest_3291 0.59 -0.6 3,457,577 + Psest_3291 0.59 +0.5 3,457,577 + Psest_3291 0.59 +0.3 3,457,578 - Psest_3291 0.59 -0.7 3,457,603 + Psest_3291 0.61 +1.2 3,457,603 + Psest_3291 0.61 -1.1 3,457,603 + Psest_3291 0.61 +1.5 3,457,603 + Psest_3291 0.61 +1.1 3,457,604 - Psest_3291 0.61 +2.1 3,457,604 - Psest_3291 0.61 -1.1 3,457,604 - Psest_3291 0.61 +0.9 3,457,604 - Psest_3291 0.61 +1.4 3,457,607 + Psest_3291 0.61 -0.8 3,457,607 + Psest_3291 0.61 -0.0 3,457,607 + Psest_3291 0.61 +1.6 3,457,607 + Psest_3291 0.61 +0.1 3,457,607 + Psest_3291 0.61 +1.9 3,457,608 - Psest_3291 0.62 -0.1 3,457,608 - Psest_3291 0.62 +0.5 3,457,608 - Psest_3291 0.62 -0.4 3,457,608 - Psest_3291 0.62 -0.2 3,457,683 + Psest_3291 0.67 -0.5 3,457,683 + Psest_3291 0.67 +0.8 3,457,683 + Psest_3291 0.67 -1.2 3,457,684 - Psest_3291 0.67 -1.4 3,457,694 - Psest_3291 0.67 -0.7 3,457,784 + Psest_3291 0.74 -0.7 3,457,785 - Psest_3291 0.74 -1.4 3,457,785 - Psest_3291 0.74 +1.2 3,457,787 - Psest_3291 0.74 +0.1 3,457,787 - Psest_3291 0.74 +1.3 3,457,787 - Psest_3291 0.74 -0.5 3,457,829 + Psest_3291 0.77 -0.4 3,457,838 - Psest_3291 0.77 -1.4 3,457,838 - Psest_3291 0.77 +0.1 3,457,916 + Psest_3291 0.83 +0.4 3,457,938 - Psest_3291 0.84 -0.4 3,458,036 - +0.1 3,458,122 + -0.8 3,458,122 + +0.1 3,458,122 + +1.2 3,458,175 - -0.6 3,458,175 - +0.6 3,458,175 - +1.0 3,458,176 + +0.9 3,458,176 + -0.3 3,458,176 + +1.0 3,458,177 - +2.1 3,458,177 - +1.8 3,458,177 - +1.8 3,458,177 - -0.8 3,458,177 - -0.8 3,458,177 - -1.8 3,458,322 + Psest_3292 0.20 -0.2 3,458,325 + Psest_3292 0.20 +2.1 3,458,337 + Psest_3292 0.22 -0.9 3,458,338 - Psest_3292 0.22 +1.8 3,458,441 + Psest_3292 0.36 +0.4 3,458,442 - Psest_3292 0.36 +1.8 3,458,759 + Psest_3292 0.79 -1.6 3,458,759 + Psest_3292 0.79 +1.6 3,458,760 - Psest_3292 0.79 +0.0 3,458,798 + Psest_3292 0.84 +1.6 3,458,883 + +0.7 3,458,883 + -0.7 3,458,883 + +1.3 3,458,883 + +1.1 3,458,883 + +0.3 3,458,883 + -1.3 3,458,883 + +0.8 3,458,883 + +0.2 3,458,883 + +0.8 3,458,883 + -1.1 3,458,883 + -1.4 3,458,883 + +0.5 3,458,883 + +0.2 3,458,883 + +3.4 3,458,883 + +1.4 3,458,884 - -0.5 3,458,884 - +0.1 3,458,884 - -0.7 3,458,884 - -0.3 3,458,884 - +0.3 3,458,884 - -0.8 3,458,884 - -0.6 3,458,884 - +0.4 3,458,912 + -0.7 3,458,912 + +1.2 3,458,913 - -1.4 3,459,052 + -0.7 3,459,052 + -1.0 3,459,053 - +1.6 3,459,053 - -0.6 3,459,053 - -1.0 3,459,073 - +0.1 3,459,073 - -1.2 3,459,073 - +0.1 3,459,073 - -1.1 3,459,251 - Psest_3293 0.11 +2.6
Or see this region's nucleotide sequence