Experiment: Cobalt chloride 0.07 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2735 and Psest_2736 are separated by 179 nucleotides Psest_2736 and Psest_2737 are separated by 141 nucleotides
Psest_2735: Psest_2735 - hypothetical protein, at 2,925,977 to 2,926,651
_2735
Psest_2736: Psest_2736 - Transposase and inactivated derivatives, at 2,926,831 to 2,927,361
_2736
Psest_2737: Psest_2737 - Restriction endonuclease, at 2,927,503 to 2,928,399
_2737
Position (kb)
2926
2927
2928 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2925.907 kb on + strand at 2925.931 kb on + strand at 2925.931 kb on + strand at 2925.932 kb on - strand at 2925.932 kb on - strand at 2925.932 kb on - strand at 2925.932 kb on - strand at 2925.932 kb on - strand at 2925.935 kb on + strand at 2925.935 kb on + strand at 2925.936 kb on - strand at 2925.936 kb on - strand at 2925.936 kb on - strand at 2925.936 kb on - strand at 2925.936 kb on - strand at 2925.954 kb on - strand at 2925.954 kb on - strand at 2926.047 kb on + strand, within Psest_2735 at 2926.182 kb on + strand, within Psest_2735 at 2926.182 kb on + strand, within Psest_2735 at 2926.183 kb on - strand, within Psest_2735 at 2926.183 kb on - strand, within Psest_2735 at 2926.183 kb on - strand, within Psest_2735 at 2926.189 kb on - strand, within Psest_2735 at 2926.213 kb on + strand, within Psest_2735 at 2926.214 kb on - strand, within Psest_2735 at 2926.214 kb on - strand, within Psest_2735 at 2926.217 kb on + strand, within Psest_2735 at 2926.217 kb on + strand, within Psest_2735 at 2926.218 kb on - strand, within Psest_2735 at 2926.320 kb on - strand, within Psest_2735 at 2926.320 kb on - strand, within Psest_2735 at 2926.320 kb on - strand, within Psest_2735 at 2926.320 kb on - strand, within Psest_2735 at 2926.363 kb on + strand, within Psest_2735 at 2926.363 kb on + strand, within Psest_2735 at 2926.363 kb on + strand, within Psest_2735 at 2926.363 kb on + strand, within Psest_2735 at 2926.380 kb on - strand, within Psest_2735 at 2926.380 kb on - strand, within Psest_2735 at 2926.380 kb on - strand, within Psest_2735 at 2926.380 kb on - strand, within Psest_2735 at 2926.395 kb on - strand, within Psest_2735 at 2926.395 kb on - strand, within Psest_2735 at 2926.395 kb on - strand, within Psest_2735 at 2926.395 kb on - strand, within Psest_2735 at 2926.468 kb on + strand, within Psest_2735 at 2926.478 kb on + strand, within Psest_2735 at 2926.581 kb on + strand, within Psest_2735 at 2926.582 kb on - strand, within Psest_2735 at 2926.582 kb on - strand, within Psest_2735 at 2926.646 kb on - strand at 2926.870 kb on + strand at 2926.870 kb on + strand at 2927.109 kb on - strand, within Psest_2736 at 2927.213 kb on - strand, within Psest_2736 at 2927.213 kb on - strand, within Psest_2736 at 2927.213 kb on - strand, within Psest_2736 at 2927.313 kb on + strand at 2927.393 kb on - strand at 2927.713 kb on + strand, within Psest_2737 at 2927.714 kb on - strand, within Psest_2737 at 2927.714 kb on - strand, within Psest_2737 at 2927.714 kb on - strand, within Psest_2737 at 2927.714 kb on - strand, within Psest_2737 at 2927.735 kb on + strand, within Psest_2737 at 2927.953 kb on + strand, within Psest_2737 at 2927.954 kb on - strand, within Psest_2737 at 2927.954 kb on - strand, within Psest_2737 at 2927.954 kb on - strand, within Psest_2737 at 2927.954 kb on - strand, within Psest_2737 at 2927.957 kb on + strand, within Psest_2737 at 2927.957 kb on + strand, within Psest_2737 at 2927.957 kb on + strand, within Psest_2737 at 2927.958 kb on - strand, within Psest_2737 at 2927.958 kb on - strand, within Psest_2737 at 2927.958 kb on - strand, within Psest_2737 at 2927.958 kb on - strand, within Psest_2737 at 2927.958 kb on - strand, within Psest_2737 at 2928.002 kb on + strand, within Psest_2737 at 2928.003 kb on - strand, within Psest_2737 at 2928.003 kb on - strand, within Psest_2737 at 2928.003 kb on - strand, within Psest_2737 at 2928.024 kb on + strand, within Psest_2737 at 2928.024 kb on + strand, within Psest_2737 at 2928.337 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.07 mM remove 2,925,907 + -1.4 2,925,931 + -0.7 2,925,931 + -0.3 2,925,932 - -0.7 2,925,932 - -0.8 2,925,932 - -1.2 2,925,932 - -1.7 2,925,932 - +0.3 2,925,935 + +0.6 2,925,935 + +0.1 2,925,936 - +0.6 2,925,936 - +1.2 2,925,936 - +0.3 2,925,936 - -1.3 2,925,936 - +0.1 2,925,954 - +1.5 2,925,954 - -0.0 2,926,047 + Psest_2735 0.10 +1.4 2,926,182 + Psest_2735 0.30 +1.1 2,926,182 + Psest_2735 0.30 +1.3 2,926,183 - Psest_2735 0.31 +0.9 2,926,183 - Psest_2735 0.31 -0.8 2,926,183 - Psest_2735 0.31 -0.5 2,926,189 - Psest_2735 0.31 -0.4 2,926,213 + Psest_2735 0.35 -0.7 2,926,214 - Psest_2735 0.35 +1.6 2,926,214 - Psest_2735 0.35 -0.0 2,926,217 + Psest_2735 0.36 -1.5 2,926,217 + Psest_2735 0.36 +0.7 2,926,218 - Psest_2735 0.36 +1.0 2,926,320 - Psest_2735 0.51 -0.3 2,926,320 - Psest_2735 0.51 +0.8 2,926,320 - Psest_2735 0.51 +0.5 2,926,320 - Psest_2735 0.51 -0.2 2,926,363 + Psest_2735 0.57 -0.0 2,926,363 + Psest_2735 0.57 +0.8 2,926,363 + Psest_2735 0.57 +1.0 2,926,363 + Psest_2735 0.57 -0.0 2,926,380 - Psest_2735 0.60 +0.6 2,926,380 - Psest_2735 0.60 -1.2 2,926,380 - Psest_2735 0.60 +2.2 2,926,380 - Psest_2735 0.60 -0.0 2,926,395 - Psest_2735 0.62 +0.8 2,926,395 - Psest_2735 0.62 +0.6 2,926,395 - Psest_2735 0.62 +0.5 2,926,395 - Psest_2735 0.62 -0.2 2,926,468 + Psest_2735 0.73 +0.2 2,926,478 + Psest_2735 0.74 -1.5 2,926,581 + Psest_2735 0.89 +1.0 2,926,582 - Psest_2735 0.90 -0.3 2,926,582 - Psest_2735 0.90 +2.0 2,926,646 - -0.2 2,926,870 + -1.0 2,926,870 + +1.6 2,927,109 - Psest_2736 0.52 -0.6 2,927,213 - Psest_2736 0.72 +1.3 2,927,213 - Psest_2736 0.72 -1.8 2,927,213 - Psest_2736 0.72 -1.4 2,927,313 + +0.3 2,927,393 - +0.1 2,927,713 + Psest_2737 0.23 -1.1 2,927,714 - Psest_2737 0.24 -0.3 2,927,714 - Psest_2737 0.24 -0.4 2,927,714 - Psest_2737 0.24 +0.0 2,927,714 - Psest_2737 0.24 -0.5 2,927,735 + Psest_2737 0.26 -1.0 2,927,953 + Psest_2737 0.50 -1.3 2,927,954 - Psest_2737 0.50 +0.3 2,927,954 - Psest_2737 0.50 +0.7 2,927,954 - Psest_2737 0.50 +1.5 2,927,954 - Psest_2737 0.50 -0.1 2,927,957 + Psest_2737 0.51 -0.6 2,927,957 + Psest_2737 0.51 +2.2 2,927,957 + Psest_2737 0.51 -0.3 2,927,958 - Psest_2737 0.51 +0.3 2,927,958 - Psest_2737 0.51 +1.3 2,927,958 - Psest_2737 0.51 +0.3 2,927,958 - Psest_2737 0.51 -0.5 2,927,958 - Psest_2737 0.51 -0.1 2,928,002 + Psest_2737 0.56 +0.2 2,928,003 - Psest_2737 0.56 -0.1 2,928,003 - Psest_2737 0.56 +0.6 2,928,003 - Psest_2737 0.56 +0.6 2,928,024 + Psest_2737 0.58 -1.2 2,928,024 + Psest_2737 0.58 +0.4 2,928,337 - -0.3
Or see this region's nucleotide sequence