Experiment: Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2575 and Psest_2576 are separated by 257 nucleotides Psest_2576 and Psest_2577 are separated by 3 nucleotides Psest_2577 and Psest_2578 are separated by 61 nucleotides
Psest_2575: Psest_2575 - tRNA_Val_CAC, at 2,754,967 to 2,755,042
_2575
Psest_2576: Psest_2576 - hypothetical protein, at 2,755,300 to 2,755,944
_2576
Psest_2577: Psest_2577 - general secretion pathway protein D, at 2,755,948 to 2,757,882
_2577
Psest_2578: Psest_2578 - O-succinylhomoserine sulfhydrylase, at 2,757,944 to 2,759,155
_2578
Position (kb)
2755
2756
2757
2758 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2755.068 kb on - strand at 2755.068 kb on - strand at 2755.085 kb on - strand at 2755.223 kb on - strand at 2755.293 kb on - strand at 2755.327 kb on + strand at 2755.384 kb on + strand, within Psest_2576 at 2755.384 kb on + strand, within Psest_2576 at 2755.385 kb on - strand, within Psest_2576 at 2755.385 kb on - strand, within Psest_2576 at 2755.385 kb on - strand, within Psest_2576 at 2755.385 kb on - strand, within Psest_2576 at 2755.443 kb on + strand, within Psest_2576 at 2755.444 kb on - strand, within Psest_2576 at 2755.444 kb on - strand, within Psest_2576 at 2755.448 kb on - strand, within Psest_2576 at 2755.448 kb on - strand, within Psest_2576 at 2755.448 kb on - strand, within Psest_2576 at 2755.500 kb on - strand, within Psest_2576 at 2755.690 kb on + strand, within Psest_2576 at 2755.691 kb on - strand, within Psest_2576 at 2755.723 kb on - strand, within Psest_2576 at 2755.765 kb on + strand, within Psest_2576 at 2755.765 kb on + strand, within Psest_2576 at 2755.765 kb on + strand, within Psest_2576 at 2755.765 kb on + strand, within Psest_2576 at 2755.765 kb on + strand, within Psest_2576 at 2755.766 kb on - strand, within Psest_2576 at 2755.766 kb on - strand, within Psest_2576 at 2755.766 kb on - strand, within Psest_2576 at 2755.766 kb on - strand, within Psest_2576 at 2755.766 kb on - strand, within Psest_2576 at 2755.974 kb on - strand at 2755.990 kb on - strand at 2756.210 kb on + strand, within Psest_2577 at 2756.210 kb on + strand, within Psest_2577 at 2756.211 kb on - strand, within Psest_2577 at 2756.212 kb on + strand, within Psest_2577 at 2756.213 kb on - strand, within Psest_2577 at 2756.481 kb on + strand, within Psest_2577 at 2756.812 kb on - strand, within Psest_2577 at 2756.853 kb on + strand, within Psest_2577 at 2756.854 kb on - strand, within Psest_2577 at 2756.854 kb on - strand, within Psest_2577 at 2756.969 kb on + strand, within Psest_2577 at 2756.970 kb on - strand, within Psest_2577 at 2757.067 kb on - strand, within Psest_2577 at 2757.334 kb on + strand, within Psest_2577 at 2757.335 kb on - strand, within Psest_2577 at 2757.335 kb on - strand, within Psest_2577 at 2757.420 kb on + strand, within Psest_2577 at 2757.420 kb on + strand, within Psest_2577 at 2757.420 kb on + strand, within Psest_2577 at 2757.420 kb on + strand, within Psest_2577 at 2757.420 kb on + strand, within Psest_2577 at 2757.420 kb on + strand, within Psest_2577 at 2757.421 kb on + strand, within Psest_2577 at 2757.421 kb on - strand, within Psest_2577 at 2757.421 kb on - strand, within Psest_2577 at 2757.544 kb on - strand, within Psest_2577 at 2757.763 kb on + strand at 2757.763 kb on + strand at 2757.763 kb on + strand at 2757.764 kb on - strand at 2757.773 kb on + strand at 2757.774 kb on - strand at 2757.774 kb on - strand at 2757.872 kb on + strand at 2757.872 kb on + strand at 2757.873 kb on - strand at 2757.873 kb on - strand at 2758.094 kb on - strand, within Psest_2578 at 2758.266 kb on + strand, within Psest_2578 at 2758.267 kb on - strand, within Psest_2578 at 2758.267 kb on - strand, within Psest_2578 at 2758.269 kb on + strand, within Psest_2578 at 2758.343 kb on - strand, within Psest_2578 at 2758.497 kb on + strand, within Psest_2578 at 2758.497 kb on + strand, within Psest_2578 at 2758.497 kb on + strand, within Psest_2578 at 2758.498 kb on - strand, within Psest_2578 at 2758.498 kb on - strand, within Psest_2578 at 2758.498 kb on - strand, within Psest_2578 at 2758.498 kb on - strand, within Psest_2578 at 2758.574 kb on - strand, within Psest_2578 at 2758.681 kb on + strand, within Psest_2578 at 2758.682 kb on - strand, within Psest_2578 at 2758.682 kb on - strand, within Psest_2578 at 2758.762 kb on - strand, within Psest_2578 at 2758.762 kb on - strand, within Psest_2578 at 2758.762 kb on - strand, within Psest_2578 at 2758.812 kb on - strand, within Psest_2578
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.05 mM remove 2,755,068 - -1.9 2,755,068 - -0.5 2,755,085 - -0.0 2,755,223 - -1.2 2,755,293 - -0.7 2,755,327 + -0.6 2,755,384 + Psest_2576 0.13 +0.9 2,755,384 + Psest_2576 0.13 +0.3 2,755,385 - Psest_2576 0.13 +2.1 2,755,385 - Psest_2576 0.13 +0.1 2,755,385 - Psest_2576 0.13 -0.3 2,755,385 - Psest_2576 0.13 +0.3 2,755,443 + Psest_2576 0.22 -0.0 2,755,444 - Psest_2576 0.22 +2.2 2,755,444 - Psest_2576 0.22 +0.7 2,755,448 - Psest_2576 0.23 -0.4 2,755,448 - Psest_2576 0.23 -2.8 2,755,448 - Psest_2576 0.23 -0.1 2,755,500 - Psest_2576 0.31 +0.6 2,755,690 + Psest_2576 0.60 -1.5 2,755,691 - Psest_2576 0.61 -2.5 2,755,723 - Psest_2576 0.66 -1.5 2,755,765 + Psest_2576 0.72 -0.5 2,755,765 + Psest_2576 0.72 +1.2 2,755,765 + Psest_2576 0.72 +0.8 2,755,765 + Psest_2576 0.72 -0.9 2,755,765 + Psest_2576 0.72 -2.0 2,755,766 - Psest_2576 0.72 -1.3 2,755,766 - Psest_2576 0.72 +0.2 2,755,766 - Psest_2576 0.72 +0.8 2,755,766 - Psest_2576 0.72 +0.2 2,755,766 - Psest_2576 0.72 +0.8 2,755,974 - +1.4 2,755,990 - +0.6 2,756,210 + Psest_2577 0.14 -0.6 2,756,210 + Psest_2577 0.14 -0.7 2,756,211 - Psest_2577 0.14 -1.7 2,756,212 + Psest_2577 0.14 -0.2 2,756,213 - Psest_2577 0.14 -1.6 2,756,481 + Psest_2577 0.28 -0.4 2,756,812 - Psest_2577 0.45 -1.5 2,756,853 + Psest_2577 0.47 -1.7 2,756,854 - Psest_2577 0.47 -1.9 2,756,854 - Psest_2577 0.47 -1.2 2,756,969 + Psest_2577 0.53 -0.9 2,756,970 - Psest_2577 0.53 -0.1 2,757,067 - Psest_2577 0.58 +0.1 2,757,334 + Psest_2577 0.72 -0.2 2,757,335 - Psest_2577 0.72 -1.4 2,757,335 - Psest_2577 0.72 -0.3 2,757,420 + Psest_2577 0.76 -0.7 2,757,420 + Psest_2577 0.76 -2.1 2,757,420 + Psest_2577 0.76 -2.3 2,757,420 + Psest_2577 0.76 -0.9 2,757,420 + Psest_2577 0.76 +0.2 2,757,420 + Psest_2577 0.76 +0.9 2,757,421 + Psest_2577 0.76 -0.5 2,757,421 - Psest_2577 0.76 -2.0 2,757,421 - Psest_2577 0.76 -0.4 2,757,544 - Psest_2577 0.82 -1.0 2,757,763 + +0.1 2,757,763 + +1.6 2,757,763 + -0.0 2,757,764 - +1.5 2,757,773 + +2.9 2,757,774 - +1.1 2,757,774 - +0.1 2,757,872 + -1.1 2,757,872 + +1.2 2,757,873 - -0.1 2,757,873 - -0.7 2,758,094 - Psest_2578 0.12 +0.1 2,758,266 + Psest_2578 0.27 +0.2 2,758,267 - Psest_2578 0.27 +0.8 2,758,267 - Psest_2578 0.27 +1.0 2,758,269 + Psest_2578 0.27 -1.0 2,758,343 - Psest_2578 0.33 -1.7 2,758,497 + Psest_2578 0.46 +1.0 2,758,497 + Psest_2578 0.46 +0.2 2,758,497 + Psest_2578 0.46 +0.1 2,758,498 - Psest_2578 0.46 +1.1 2,758,498 - Psest_2578 0.46 -1.1 2,758,498 - Psest_2578 0.46 -0.9 2,758,498 - Psest_2578 0.46 +0.3 2,758,574 - Psest_2578 0.52 -0.6 2,758,681 + Psest_2578 0.61 +1.0 2,758,682 - Psest_2578 0.61 +0.2 2,758,682 - Psest_2578 0.61 +0.2 2,758,762 - Psest_2578 0.67 -0.2 2,758,762 - Psest_2578 0.67 +1.2 2,758,762 - Psest_2578 0.67 +0.4 2,758,812 - Psest_2578 0.72 +2.2
Or see this region's nucleotide sequence