Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0528 and Psest_0529 are separated by 117 nucleotides Psest_0529 and Psest_0530 are separated by 9 nucleotides Psest_0530 and Psest_0531 overlap by 8 nucleotides
Psest_0528: Psest_0528 - apolipoprotein N-acyltransferase, at 581,203 to 582,717
_0528
Psest_0529: Psest_0529 - Putative Mg2+ and Co2+ transporter CorC, at 582,835 to 583,677
_0529
Psest_0530: Psest_0530 - metalloprotein, YbeY/UPF0054 family, at 583,687 to 584,169
_0530
Psest_0531: Psest_0531 - Phosphate starvation-inducible protein PhoH, predicted ATPase, at 584,162 to 585,328
_0531
Position (kb) 582
583
584 Strain fitness (log2 ratio) -1
0
1
2
3
4
5 at 582.735 kb on + strand at 582.735 kb on + strand at 582.735 kb on + strand at 582.736 kb on - strand at 582.736 kb on - strand at 582.736 kb on - strand at 582.736 kb on - strand at 582.736 kb on - strand at 582.736 kb on - strand at 582.736 kb on - strand at 582.736 kb on - strand at 582.821 kb on + strand at 582.821 kb on + strand at 582.836 kb on + strand at 582.837 kb on - strand at 582.896 kb on - strand at 583.017 kb on - strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.085 kb on + strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.086 kb on - strand, within Psest_0529 at 583.489 kb on + strand, within Psest_0529 at 583.489 kb on + strand, within Psest_0529 at 583.490 kb on - strand, within Psest_0529 at 583.490 kb on - strand, within Psest_0529 at 583.586 kb on - strand, within Psest_0529 at 583.586 kb on - strand, within Psest_0529 at 583.730 kb on + strand at 583.730 kb on + strand at 583.730 kb on + strand at 583.730 kb on + strand at 583.730 kb on + strand at 583.730 kb on + strand at 584.230 kb on - strand at 584.267 kb on + strand at 584.267 kb on + strand at 584.267 kb on + strand at 584.268 kb on - strand at 584.268 kb on - strand at 584.318 kb on + strand, within Psest_0531 at 584.319 kb on - strand, within Psest_0531 at 584.506 kb on - strand, within Psest_0531 at 584.506 kb on - strand, within Psest_0531 at 584.506 kb on - strand, within Psest_0531 at 584.506 kb on - strand, within Psest_0531 at 584.557 kb on - strand, within Psest_0531 at 584.557 kb on - strand, within Psest_0531 at 584.557 kb on - strand, within Psest_0531 at 584.590 kb on - strand, within Psest_0531 at 584.590 kb on - strand, within Psest_0531 at 584.590 kb on - strand, within Psest_0531 at 584.676 kb on - strand, within Psest_0531 at 584.676 kb on - strand, within Psest_0531
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 582,735 + +0.5 582,735 + +2.4 582,735 + +0.7 582,736 - -1.1 582,736 - -0.9 582,736 - -0.6 582,736 - +1.6 582,736 - -1.3 582,736 - +0.2 582,736 - +0.1 582,736 - -1.3 582,821 + +1.8 582,821 + +1.3 582,836 + +1.5 582,837 - +1.8 582,896 - +2.0 583,017 - Psest_0529 0.22 +3.1 583,085 + Psest_0529 0.30 +2.9 583,085 + Psest_0529 0.30 +2.7 583,085 + Psest_0529 0.30 +2.9 583,085 + Psest_0529 0.30 +3.4 583,085 + Psest_0529 0.30 +2.2 583,085 + Psest_0529 0.30 +3.4 583,085 + Psest_0529 0.30 +4.8 583,085 + Psest_0529 0.30 +4.7 583,085 + Psest_0529 0.30 +4.8 583,085 + Psest_0529 0.30 +4.5 583,085 + Psest_0529 0.30 +3.4 583,085 + Psest_0529 0.30 +4.5 583,085 + Psest_0529 0.30 +2.0 583,085 + Psest_0529 0.30 +4.4 583,085 + Psest_0529 0.30 +4.3 583,086 - Psest_0529 0.30 +3.3 583,086 - Psest_0529 0.30 +2.8 583,086 - Psest_0529 0.30 +4.3 583,086 - Psest_0529 0.30 +3.7 583,086 - Psest_0529 0.30 +4.1 583,086 - Psest_0529 0.30 +3.1 583,086 - Psest_0529 0.30 +4.4 583,086 - Psest_0529 0.30 +3.1 583,086 - Psest_0529 0.30 +3.3 583,086 - Psest_0529 0.30 +3.3 583,086 - Psest_0529 0.30 +5.4 583,489 + Psest_0529 0.78 +3.6 583,489 + Psest_0529 0.78 +5.1 583,490 - Psest_0529 0.78 +3.1 583,490 - Psest_0529 0.78 +2.9 583,586 - Psest_0529 0.89 +4.3 583,586 - Psest_0529 0.89 +2.4 583,730 + +0.6 583,730 + +0.7 583,730 + -0.3 583,730 + +0.3 583,730 + +0.5 583,730 + -0.5 584,230 - -0.6 584,267 + -0.1 584,267 + -0.8 584,267 + -0.5 584,268 - -0.2 584,268 - +1.9 584,318 + Psest_0531 0.13 -1.1 584,319 - Psest_0531 0.13 -1.1 584,506 - Psest_0531 0.29 -0.2 584,506 - Psest_0531 0.29 +0.9 584,506 - Psest_0531 0.29 +0.1 584,506 - Psest_0531 0.29 -0.3 584,557 - Psest_0531 0.34 -0.4 584,557 - Psest_0531 0.34 +0.3 584,557 - Psest_0531 0.34 -1.3 584,590 - Psest_0531 0.37 -0.1 584,590 - Psest_0531 0.37 -0.3 584,590 - Psest_0531 0.37 -0.1 584,676 - Psest_0531 0.44 -0.0 584,676 - Psest_0531 0.44 -0.1
Or see this region's nucleotide sequence