Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3429

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
3,596,043	+				+0.5
3,596,043	+				-0.0
3,596,043	+				+0.7
3,596,044	-				+0.4
3,596,044	-				-0.7
3,596,044	-				+1.6
3,596,044	-				+0.7
3,596,047	+				-0.0
3,596,047	+				-1.1
3,596,047	+				-0.4
3,596,047	+				-1.1
3,596,047	+				+0.2
3,596,047	+				-0.4
3,596,047	+				+0.1
3,596,047	+				+0.8
3,596,047	+				-0.6
3,596,047	+				-0.6
3,596,047	+				+0.3
3,596,048	-				+1.3
3,596,048	-				-1.0
3,596,048	-				+1.6
3,596,048	-				+0.5
3,596,048	-				+0.7
3,596,048	-				+2.5
3,596,086	-				-0.1
3,596,086	-				-1.3
3,596,125	-				-0.5
3,596,125	-				+0.6
3,596,125	-				-0.0
3,596,125	-				-0.6
3,596,125	-				-2.3
3,596,125	-				+1.0
3,596,142	-				+0.5
3,596,213	-				-0.9
3,596,247	+				-1.0
3,596,257	+				-0.8
3,596,258	-				-0.5
3,596,286	+				+0.1
3,596,286	+				+0.4
3,596,287	-				-0.5
3,596,424	+		Psest_3429	0.25	-1.7
3,596,424	+		Psest_3429	0.25	-1.4
3,596,424	+		Psest_3429	0.25	-1.9
3,596,425	-		Psest_3429	0.26	-1.8
3,596,425	-		Psest_3429	0.26	-0.2
3,596,425	-		Psest_3429	0.26	+1.0
3,596,425	-		Psest_3429	0.26	+0.9
3,596,425	-		Psest_3429	0.26	+1.5
3,596,425	-		Psest_3429	0.26	-0.6
3,596,440	+		Psest_3429	0.29	+0.0
3,596,440	+		Psest_3429	0.29	+0.6
3,596,440	+		Psest_3429	0.29	+0.5
3,596,441	-		Psest_3429	0.30	-0.2
3,596,575	+		Psest_3429	0.63	+0.7
3,596,576	-		Psest_3429	0.63	+0.4
3,596,576	-		Psest_3429	0.63	-0.6
3,596,576	-		Psest_3429	0.63	+0.4
3,596,576	-		Psest_3429	0.63	-0.5
3,596,682	+				-1.1
3,596,688	+				-0.0
3,596,689	-				-0.8
3,596,933	+				-0.3
3,596,933	+				-1.4
3,596,934	-				+0.6
3,596,934	-				+2.4
3,596,934	-				-2.1
3,596,934	-				+0.8
3,596,934	-				-1.3
3,596,934	-				-0.4
3,596,934	-				+1.0
3,596,934	-				-0.5
3,596,934	-				+0.8
3,596,934	-				+0.2
3,596,936	-				+0.6
3,596,936	-				-1.2
3,596,936	-				-0.4
3,596,936	-				-0.6
3,596,936	-				+1.2
3,596,936	-				+0.2
3,597,023	+		Psest_3430	0.13	-1.2
3,597,024	-		Psest_3430	0.13	-0.4
3,597,131	-		Psest_3430	0.18	-0.4
3,597,207	+		Psest_3430	0.22	-0.1
3,597,207	+		Psest_3430	0.22	+0.2
3,597,275	+		Psest_3430	0.25	-0.3
3,597,275	+		Psest_3430	0.25	+0.6
3,597,275	+		Psest_3430	0.25	-0.1
3,597,334	+		Psest_3430	0.27	-0.4
3,597,334	+		Psest_3430	0.27	-2.0
3,597,354	-		Psest_3430	0.28	+2.6
3,597,354	-		Psest_3430	0.28	-0.3
3,597,476	+		Psest_3430	0.34	-0.9
3,597,476	+		Psest_3430	0.34	+1.3
3,597,476	+		Psest_3430	0.34	-1.3
3,597,476	+		Psest_3430	0.34	-1.5
3,597,476	+		Psest_3430	0.34	-1.2
3,597,476	+		Psest_3430	0.34	+1.6
3,597,483	-		Psest_3430	0.34	+0.5
3,597,486	-		Psest_3430	0.34	-1.4
3,597,639	-		Psest_3430	0.41	+1.5
3,597,649	+		Psest_3430	0.41	+0.5
3,597,683	-		Psest_3430	0.43	+1.6
3,597,683	-		Psest_3430	0.43	+1.2