Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0330 and Psest_0331 are separated by 136 nucleotides Psest_0331 and Psest_0332 are separated by 22 nucleotides Psest_0332 and Psest_0333 are separated by 178 nucleotides
Psest_0330: Psest_0330 - 3-phosphoglycerate kinase, at 354,092 to 355,252
_0330
Psest_0331: Psest_0331 - hypothetical protein, at 355,389 to 355,580
_0331
Psest_0332: Psest_0332 - Membrane-bound lysozyme-inhibitor of c-type lysozyme., at 355,603 to 355,938
_0332
Psest_0333: Psest_0333 - fructose-bisphosphate aldolase, class II, Calvin cycle subtype, at 356,117 to 357,181
_0333
Position (kb) 355
356 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 355.361 kb on + strand at 355.361 kb on + strand at 355.361 kb on + strand at 355.361 kb on + strand at 355.688 kb on + strand, within Psest_0332 at 355.689 kb on - strand, within Psest_0332 at 355.782 kb on + strand, within Psest_0332 at 355.782 kb on + strand, within Psest_0332 at 355.782 kb on + strand, within Psest_0332 at 355.782 kb on + strand, within Psest_0332 at 355.782 kb on + strand, within Psest_0332 at 355.782 kb on + strand, within Psest_0332 at 355.782 kb on + strand, within Psest_0332 at 355.782 kb on + strand, within Psest_0332 at 355.782 kb on + strand, within Psest_0332 at 355.782 kb on + strand, within Psest_0332 at 355.782 kb on + strand, within Psest_0332 at 355.783 kb on - strand, within Psest_0332 at 355.783 kb on - strand, within Psest_0332 at 355.783 kb on - strand, within Psest_0332 at 355.825 kb on + strand, within Psest_0332 at 355.825 kb on + strand, within Psest_0332 at 355.825 kb on + strand, within Psest_0332 at 355.826 kb on - strand, within Psest_0332 at 355.826 kb on - strand, within Psest_0332 at 355.827 kb on + strand, within Psest_0332 at 355.876 kb on + strand, within Psest_0332 at 355.932 kb on + strand at 355.932 kb on + strand at 355.932 kb on + strand at 355.932 kb on + strand at 355.932 kb on + strand at 355.933 kb on - strand at 355.933 kb on - strand at 355.943 kb on - strand at 355.950 kb on + strand at 355.950 kb on + strand at 355.951 kb on - strand at 356.003 kb on - strand at 356.024 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 355,361 + +2.2 355,361 + +4.2 355,361 + +0.6 355,361 + +1.1 355,688 + Psest_0332 0.25 +3.0 355,689 - Psest_0332 0.26 -1.2 355,782 + Psest_0332 0.53 +2.0 355,782 + Psest_0332 0.53 -1.0 355,782 + Psest_0332 0.53 +2.3 355,782 + Psest_0332 0.53 -0.6 355,782 + Psest_0332 0.53 -0.9 355,782 + Psest_0332 0.53 +0.1 355,782 + Psest_0332 0.53 +2.6 355,782 + Psest_0332 0.53 +2.1 355,782 + Psest_0332 0.53 +0.8 355,782 + Psest_0332 0.53 +1.0 355,782 + Psest_0332 0.53 +1.3 355,783 - Psest_0332 0.54 -1.0 355,783 - Psest_0332 0.54 -1.5 355,783 - Psest_0332 0.54 +0.2 355,825 + Psest_0332 0.66 -1.9 355,825 + Psest_0332 0.66 +0.7 355,825 + Psest_0332 0.66 +1.8 355,826 - Psest_0332 0.66 -0.1 355,826 - Psest_0332 0.66 +0.8 355,827 + Psest_0332 0.67 +1.4 355,876 + Psest_0332 0.81 +2.9 355,932 + -0.0 355,932 + +0.6 355,932 + +2.2 355,932 + -1.8 355,932 + -0.1 355,933 - -1.3 355,933 - -1.5 355,943 - +2.2 355,950 + +0.5 355,950 + +2.2 355,951 - -0.2 356,003 - -1.5 356,024 + +0.6
Or see this region's nucleotide sequence