Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3213

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
3,379,940	+		Psest_3211	0.68	+1.8
3,380,356	+		Psest_3212	0.30	-1.5
3,380,356	+		Psest_3212	0.30	+1.0
3,380,356	+		Psest_3212	0.30	-0.4
3,380,356	+		Psest_3212	0.30	-2.1
3,380,357	-		Psest_3212	0.30	-0.5
3,380,357	-		Psest_3212	0.30	-0.3
3,380,357	-		Psest_3212	0.30	+0.8
3,380,357	-		Psest_3212	0.30	-0.3
3,380,357	-		Psest_3212	0.30	-1.0
3,380,357	-		Psest_3212	0.30	+1.1
3,380,464	-		Psest_3212	0.52	+0.7
3,380,483	+		Psest_3212	0.56	-1.7
3,380,484	-		Psest_3212	0.57	+1.1
3,380,595	-		Psest_3212	0.79	+0.8
3,380,657	+				+0.4
3,380,680	-				+2.2
3,380,809	+				+1.0
3,380,809	+				+1.6
3,380,809	+				-0.4
3,380,809	+				+2.3
3,380,810	-				+0.7
3,380,810	-				-0.3
3,380,810	-				+0.4
3,380,810	-				-0.4
3,380,810	-				+0.1
3,380,822	+				-0.0
3,380,822	+				+0.4
3,380,822	+				+0.2
3,380,822	+				-0.1
3,380,822	+				-0.5
3,380,822	+				+2.1
3,380,822	+				+2.2
3,380,822	+				-0.6
3,380,822	+				-1.8
3,380,822	+				-2.5
3,380,823	-				-0.1
3,380,823	-				+0.2
3,380,823	-				+1.1
3,380,823	-				-0.0
3,380,823	-				-0.1
3,380,823	-				-0.3
3,380,823	-				-0.0
3,380,830	+				+1.7
3,380,831	-				-0.4
3,380,912	+				-0.4
3,380,913	-				-2.1
3,380,943	+				-1.0
3,380,943	+				+1.0
3,380,958	+				-0.0
3,380,959	-				-1.1
3,380,959	-				+0.9
3,381,020	+				-0.2
3,381,021	-				-0.7
3,381,021	-				+1.8
3,381,350	+		Psest_3213	0.35	-1.0
3,381,351	-		Psest_3213	0.35	-2.1
3,381,351	-		Psest_3213	0.35	-0.2
3,381,351	-		Psest_3213	0.35	+2.1
3,381,424	+		Psest_3213	0.41	+1.1
3,381,425	-		Psest_3213	0.41	-1.1
3,381,425	-		Psest_3213	0.41	+0.4
3,381,425	-		Psest_3213	0.41	+0.0
3,381,425	-		Psest_3213	0.41	-0.9
3,381,425	-		Psest_3213	0.41	+0.6
3,381,522	+		Psest_3213	0.50	-1.1
3,381,522	+		Psest_3213	0.50	-1.5
3,381,523	-		Psest_3213	0.50	+0.5
3,381,523	-		Psest_3213	0.50	+2.4
3,381,523	-		Psest_3213	0.50	-1.4
3,381,830	+		Psest_3213	0.76	-0.6
3,381,830	+		Psest_3213	0.76	+0.7
3,381,831	-		Psest_3213	0.76	-0.2
3,381,831	-		Psest_3213	0.76	+3.6
3,381,831	-		Psest_3213	0.76	-1.2
3,382,501	-		Psest_3214	0.10	-0.4
3,382,501	-		Psest_3214	0.10	-0.1
3,382,501	-		Psest_3214	0.10	+1.0
3,382,628	+		Psest_3214	0.16	-0.2
3,382,628	+		Psest_3214	0.16	-0.4
3,382,628	+		Psest_3214	0.16	-1.4
3,382,629	-		Psest_3214	0.16	-0.2
3,382,629	-		Psest_3214	0.16	+1.3
3,382,629	-		Psest_3214	0.16	-0.4
3,382,629	-		Psest_3214	0.16	+0.6
3,382,629	-		Psest_3214	0.16	-1.5
3,382,752	-		Psest_3214	0.22	+0.6
3,382,752	-		Psest_3214	0.22	+0.4