Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2555

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
2,735,852	+		Psest_2554	0.68	+0.3
2,735,930	+		Psest_2554	0.72	+0.4
2,735,931	-		Psest_2554	0.72	+1.4
2,735,993	+		Psest_2554	0.75	-0.1
2,735,993	+		Psest_2554	0.75	+1.2
2,735,993	+		Psest_2554	0.75	-1.4
2,735,993	+		Psest_2554	0.75	+0.3
2,735,994	-		Psest_2554	0.75	+0.5
2,735,994	-		Psest_2554	0.75	+1.3
2,736,164	+		Psest_2554	0.84	-0.0
2,736,164	+		Psest_2554	0.84	-0.3
2,736,237	+		Psest_2554	0.87	+0.1
2,736,238	-		Psest_2554	0.87	-0.4
2,736,513	+				+0.2
2,736,547	-				+0.2
2,736,633	+				-0.2
2,736,645	+				-2.1
2,736,649	+				-0.3
2,736,650	-				-0.1
2,736,688	+				-0.4
2,736,688	+				-0.5
2,736,688	+				+1.0
2,736,688	+				+0.5
2,736,688	+				+0.4
2,736,689	-				-2.5
2,736,689	-				-1.0
2,736,689	-				+1.5
2,736,689	-				-0.7
2,736,689	-				-0.1
2,736,689	-				-0.0
2,736,689	-				-0.1
2,736,689	-				+2.0
2,736,689	-				-1.6
2,736,689	-				-0.3
2,736,692	+				-1.0
2,736,692	+				+0.7
2,736,693	-				-0.2
2,736,693	-				+0.4
2,736,693	-				-0.0
2,736,917	+		Psest_2555	0.23	-1.3
2,736,918	-		Psest_2555	0.23	+1.1
2,736,918	-		Psest_2555	0.23	-2.1
2,737,085	+		Psest_2555	0.40	+2.5
2,737,085	+		Psest_2555	0.40	+1.2
2,737,085	+		Psest_2555	0.40	-0.9
2,737,085	+		Psest_2555	0.40	-0.1
2,737,085	+		Psest_2555	0.40	+0.4
2,737,085	+		Psest_2555	0.40	-0.5
2,737,086	-		Psest_2555	0.40	-0.0
2,737,086	-		Psest_2555	0.40	-2.3
2,737,086	-		Psest_2555	0.40	-0.2
2,737,086	-		Psest_2555	0.40	-0.3
2,737,172	+		Psest_2555	0.48	-1.9
2,737,173	-		Psest_2555	0.48	+1.8
2,737,251	-		Psest_2555	0.56	-0.4
2,737,346	+		Psest_2555	0.65	+0.1
2,737,346	+		Psest_2555	0.65	-1.2
2,737,346	+		Psest_2555	0.65	-0.3
2,737,346	+		Psest_2555	0.65	+2.1
2,737,347	-		Psest_2555	0.65	+2.9
2,737,347	-		Psest_2555	0.65	+0.3
2,737,347	-		Psest_2555	0.65	-1.9
2,737,368	-		Psest_2555	0.68	-0.8
2,737,368	-		Psest_2555	0.68	+1.0
2,737,464	-		Psest_2555	0.77	-0.0
2,737,464	-		Psest_2555	0.77	-0.2
2,737,665	+				-0.9
2,737,665	+				+0.6
2,737,666	-				-1.1
2,737,666	-				-0.3
2,737,666	-				+0.5
2,737,801	+		Psest_2556	0.10	+0.3
2,737,858	+		Psest_2556	0.16	+0.3
2,737,859	-		Psest_2556	0.16	+1.0
2,737,859	-		Psest_2556	0.16	+0.6
2,737,859	-		Psest_2556	0.16	+2.1
2,737,981	-		Psest_2556	0.28	+1.5
2,737,981	-		Psest_2556	0.28	+1.3
2,738,024	+		Psest_2556	0.32	+0.6
2,738,024	+		Psest_2556	0.32	+0.8
2,738,024	+		Psest_2556	0.32	-0.7
2,738,024	+		Psest_2556	0.32	+0.9
2,738,025	-		Psest_2556	0.32	-0.5
2,738,025	-		Psest_2556	0.32	-0.1
2,738,025	-		Psest_2556	0.32	+1.4
2,738,025	-		Psest_2556	0.32	-1.0
2,738,025	-		Psest_2556	0.32	-1.0
2,738,025	-		Psest_2556	0.32	-0.4
2,738,025	-		Psest_2556	0.32	+0.5
2,738,025	-		Psest_2556	0.32	-1.0
2,738,026	+		Psest_2556	0.32	+0.7
2,738,026	+		Psest_2556	0.32	-0.3
2,738,026	+		Psest_2556	0.32	+0.0
2,738,026	+		Psest_2556	0.32	-0.4
2,738,026	+		Psest_2556	0.32	+0.3
2,738,026	+		Psest_2556	0.32	+0.5
2,738,026	+		Psest_2556	0.32	+1.3
2,738,026	+		Psest_2556	0.32	+0.4
2,738,027	-		Psest_2556	0.32	+0.3
2,738,027	-		Psest_2556	0.32	-0.4
2,738,027	-		Psest_2556	0.32	+0.4
2,738,027	-		Psest_2556	0.32	-1.4
2,738,027	-		Psest_2556	0.32	-0.4
2,738,027	-		Psest_2556	0.32	-0.8
2,738,038	+		Psest_2556	0.33	-0.8
2,738,047	-		Psest_2556	0.34	-1.1
2,738,092	+		Psest_2556	0.38	-1.0
2,738,093	-		Psest_2556	0.39	+0.0
2,738,107	+		Psest_2556	0.40	-1.3
2,738,108	-		Psest_2556	0.40	+0.1
2,738,108	-		Psest_2556	0.40	+0.8
2,738,108	-		Psest_2556	0.40	+0.6
2,738,116	+		Psest_2556	0.41	+0.0
2,738,230	+		Psest_2556	0.52	+0.3
2,738,587	+		Psest_2556	0.86	+0.1
2,738,587	+		Psest_2556	0.86	-0.6
2,738,587	+		Psest_2556	0.86	-2.0
2,738,587	+		Psest_2556	0.86	-0.7
2,738,587	+		Psest_2556	0.86	+0.3
2,738,588	-		Psest_2556	0.86	+1.9