Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1405

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
1,511,013	+				+1.4
1,511,023	+				+1.1
1,511,024	-				-0.3
1,511,024	-				-0.7
1,511,024	-				-0.3
1,511,024	-				-2.1
1,511,099	+				-0.4
1,511,099	+				+0.2
1,511,117	+				-1.5
1,511,135	+				-0.2
1,511,136	-				-1.3
1,511,136	-				-0.8
1,511,136	-				-0.3
1,511,193	+				-0.1
1,511,430	+		Psest_1404	0.38	-0.9
1,511,430	+		Psest_1404	0.38	+0.5
1,511,430	+		Psest_1404	0.38	+1.7
1,511,430	+		Psest_1404	0.38	+0.5
1,511,430	+		Psest_1404	0.38	-1.5
1,511,430	+		Psest_1404	0.38	+2.1
1,511,430	+		Psest_1404	0.38	-0.1
1,511,430	+		Psest_1404	0.38	-0.6
1,511,430	+		Psest_1404	0.38	-0.6
1,511,430	+		Psest_1404	0.38	-0.5
1,511,430	+		Psest_1404	0.38	+1.1
1,511,430	+		Psest_1404	0.38	+0.1
1,511,430	+		Psest_1404	0.38	+1.2
1,511,430	+		Psest_1404	0.38	+0.6
1,511,430	+		Psest_1404	0.38	-0.7
1,511,431	-		Psest_1404	0.38	+0.7
1,511,431	-		Psest_1404	0.38	-0.4
1,511,431	-		Psest_1404	0.38	-1.4
1,511,431	-		Psest_1404	0.38	-0.8
1,511,431	-		Psest_1404	0.38	+0.4
1,511,431	-		Psest_1404	0.38	+1.5
1,511,486	+		Psest_1404	0.47	+2.3
1,511,486	+		Psest_1404	0.47	-0.5
1,511,486	+		Psest_1404	0.47	+0.9
1,511,486	+		Psest_1404	0.47	+0.6
1,511,487	-		Psest_1404	0.48	-0.6
1,511,781	+				-0.1
1,511,781	+				+0.7
1,511,781	+				+1.1
1,511,781	+				+0.4
1,511,782	-				+0.6
1,511,782	-				-0.6
1,511,834	+				+0.8
1,511,834	+				-0.8
1,511,834	+				-0.8
1,511,835	-				+0.5
1,511,874	+				-0.1
1,511,978	+				+1.4
1,511,978	+				-1.3
1,511,978	+				-1.1
1,511,979	-				-0.0
1,511,979	-				+0.9
1,511,979	-				+1.4
1,511,979	-				-0.7
1,511,996	+				-1.4
1,511,996	+				-0.2
1,511,997	-				-0.8
1,511,997	-				+1.0
1,511,997	-				-0.0
1,511,997	-				+0.2
1,511,997	-				+1.9
1,511,997	-				-1.2
1,512,000	+				+0.9
1,512,000	+				+0.9
1,512,000	+				-2.7
1,512,000	+				-1.3
1,512,000	+				-1.4
1,512,000	+				-0.0
1,512,001	-				+0.3
1,512,001	-				+1.8
1,512,001	-				-0.2
1,512,013	-				-1.4
1,512,108	+		Psest_1405	0.26	+0.1
1,512,108	+		Psest_1405	0.26	+2.4
1,512,108	+		Psest_1405	0.26	+0.8
1,512,108	+		Psest_1405	0.26	+0.6
1,512,108	+		Psest_1405	0.26	-2.9
1,512,108	+		Psest_1405	0.26	-0.4
1,512,108	+		Psest_1405	0.26	+0.1
1,512,109	-		Psest_1405	0.26	+1.0
1,512,109	-		Psest_1405	0.26	-0.7
1,512,109	-		Psest_1405	0.26	+1.1
1,512,109	-		Psest_1405	0.26	-1.9
1,512,109	-		Psest_1405	0.26	-0.2
1,512,109	-		Psest_1405	0.26	-0.1
1,512,109	-		Psest_1405	0.26	+0.1
1,512,109	-		Psest_1405	0.26	-1.1
1,512,111	+		Psest_1405	0.27	-0.4
1,512,111	+		Psest_1405	0.27	-0.5
1,512,111	+		Psest_1405	0.27	-2.8
1,512,111	+		Psest_1405	0.27	-0.4
1,512,111	+		Psest_1405	0.27	-0.9
1,512,111	+		Psest_1405	0.27	+1.4
1,512,112	-		Psest_1405	0.27	+0.6
1,512,112	-		Psest_1405	0.27	-1.5
1,512,112	-		Psest_1405	0.27	+0.2
1,512,112	-		Psest_1405	0.27	+0.9
1,512,123	-		Psest_1405	0.30	-1.6
1,512,289	+		Psest_1405	0.68	-1.2
1,512,353	+		Psest_1405	0.82	-0.6
1,512,467	+				-1.5
1,512,467	+				+0.9
1,512,467	+				-2.0
1,512,467	+				-0.4
1,512,467	+				-0.1
1,512,468	-				+0.2
1,512,468	-				-2.0
1,512,468	-				+0.9
1,512,468	-				+0.6
1,512,468	-				-0.5
1,512,468	-				-1.5
1,512,520	-				+0.8
1,512,818	+		Psest_1406	0.22	-1.3
1,512,819	-		Psest_1406	0.22	-0.2