Experiment: Nickel (II) chloride 0.9 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3848 and Psest_3849 are separated by 51 nucleotides Psest_3849 and Psest_3850 are separated by 142 nucleotides
Psest_3848: Psest_3848 - hypothetical protein, at 4,020,191 to 4,020,952
_3848
Psest_3849: Psest_3849 - Membrane proteins related to metalloendopeptidases, at 4,021,004 to 4,021,900
_3849
Psest_3850: Psest_3850 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 4,022,043 to 4,022,960
_3850
Position (kb) 4021
4022 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4020.010 kb on - strand at 4020.029 kb on - strand at 4020.044 kb on + strand at 4020.105 kb on - strand at 4020.114 kb on + strand at 4020.114 kb on + strand at 4020.115 kb on - strand at 4020.115 kb on - strand at 4020.115 kb on - strand at 4020.115 kb on - strand at 4020.115 kb on - strand at 4020.115 kb on - strand at 4020.317 kb on + strand, within Psest_3848 at 4020.318 kb on - strand, within Psest_3848 at 4020.318 kb on - strand, within Psest_3848 at 4020.318 kb on - strand, within Psest_3848 at 4020.318 kb on - strand, within Psest_3848 at 4020.374 kb on + strand, within Psest_3848 at 4020.374 kb on + strand, within Psest_3848 at 4020.375 kb on - strand, within Psest_3848 at 4020.375 kb on - strand, within Psest_3848 at 4020.375 kb on - strand, within Psest_3848 at 4020.377 kb on + strand, within Psest_3848 at 4020.377 kb on + strand, within Psest_3848 at 4020.377 kb on + strand, within Psest_3848 at 4020.377 kb on + strand, within Psest_3848 at 4020.377 kb on + strand, within Psest_3848 at 4020.377 kb on + strand, within Psest_3848 at 4020.377 kb on + strand, within Psest_3848 at 4020.378 kb on - strand, within Psest_3848 at 4020.378 kb on - strand, within Psest_3848 at 4020.378 kb on - strand, within Psest_3848 at 4020.378 kb on - strand, within Psest_3848 at 4020.378 kb on - strand, within Psest_3848 at 4020.378 kb on - strand, within Psest_3848 at 4020.378 kb on - strand, within Psest_3848 at 4020.378 kb on - strand, within Psest_3848 at 4020.378 kb on - strand, within Psest_3848 at 4020.419 kb on + strand, within Psest_3848 at 4020.420 kb on - strand, within Psest_3848 at 4020.467 kb on + strand, within Psest_3848 at 4020.467 kb on + strand, within Psest_3848 at 4020.467 kb on + strand, within Psest_3848 at 4020.467 kb on + strand, within Psest_3848 at 4020.467 kb on + strand, within Psest_3848 at 4020.467 kb on + strand, within Psest_3848 at 4020.467 kb on + strand, within Psest_3848 at 4020.467 kb on + strand, within Psest_3848 at 4020.467 kb on + strand, within Psest_3848 at 4020.467 kb on + strand, within Psest_3848 at 4020.467 kb on + strand, within Psest_3848 at 4020.467 kb on + strand, within Psest_3848 at 4020.467 kb on + strand, within Psest_3848 at 4020.467 kb on + strand, within Psest_3848 at 4020.468 kb on - strand, within Psest_3848 at 4020.468 kb on - strand, within Psest_3848 at 4020.468 kb on - strand, within Psest_3848 at 4020.468 kb on - strand, within Psest_3848 at 4020.468 kb on - strand, within Psest_3848 at 4020.468 kb on - strand, within Psest_3848 at 4020.468 kb on - strand, within Psest_3848 at 4020.468 kb on - strand, within Psest_3848 at 4020.468 kb on - strand, within Psest_3848 at 4020.468 kb on - strand, within Psest_3848 at 4020.468 kb on - strand, within Psest_3848 at 4020.468 kb on - strand, within Psest_3848 at 4020.468 kb on - strand, within Psest_3848 at 4020.468 kb on - strand, within Psest_3848 at 4020.468 kb on - strand, within Psest_3848 at 4020.468 kb on - strand, within Psest_3848 at 4020.468 kb on - strand, within Psest_3848 at 4020.527 kb on + strand, within Psest_3848 at 4020.527 kb on + strand, within Psest_3848 at 4020.527 kb on + strand, within Psest_3848 at 4020.527 kb on + strand, within Psest_3848 at 4020.527 kb on + strand, within Psest_3848 at 4020.527 kb on + strand, within Psest_3848 at 4020.527 kb on + strand, within Psest_3848 at 4020.527 kb on + strand, within Psest_3848 at 4020.527 kb on + strand, within Psest_3848 at 4020.527 kb on + strand, within Psest_3848 at 4020.527 kb on + strand, within Psest_3848 at 4020.527 kb on + strand, within Psest_3848 at 4020.527 kb on + strand, within Psest_3848 at 4020.527 kb on + strand, within Psest_3848 at 4020.527 kb on + strand, within Psest_3848 at 4020.528 kb on - strand, within Psest_3848 at 4020.528 kb on - strand, within Psest_3848 at 4020.528 kb on - strand, within Psest_3848 at 4020.528 kb on - strand, within Psest_3848 at 4020.528 kb on - strand, within Psest_3848 at 4020.528 kb on - strand, within Psest_3848 at 4020.528 kb on - strand, within Psest_3848 at 4020.528 kb on - strand, within Psest_3848 at 4020.528 kb on - strand, within Psest_3848 at 4020.528 kb on - strand, within Psest_3848 at 4020.528 kb on - strand, within Psest_3848 at 4020.528 kb on - strand, within Psest_3848 at 4020.528 kb on - strand, within Psest_3848 at 4020.528 kb on - strand, within Psest_3848 at 4020.656 kb on + strand, within Psest_3848 at 4020.656 kb on + strand, within Psest_3848 at 4020.662 kb on + strand, within Psest_3848 at 4020.662 kb on + strand, within Psest_3848 at 4020.662 kb on + strand, within Psest_3848 at 4020.662 kb on + strand, within Psest_3848 at 4020.662 kb on + strand, within Psest_3848 at 4020.662 kb on + strand, within Psest_3848 at 4020.662 kb on + strand, within Psest_3848 at 4020.662 kb on + strand, within Psest_3848 at 4020.663 kb on - strand, within Psest_3848 at 4020.677 kb on + strand, within Psest_3848 at 4020.677 kb on + strand, within Psest_3848 at 4020.677 kb on + strand, within Psest_3848 at 4020.684 kb on + strand, within Psest_3848 at 4020.848 kb on + strand, within Psest_3848 at 4020.848 kb on + strand, within Psest_3848 at 4020.849 kb on - strand, within Psest_3848 at 4020.849 kb on - strand, within Psest_3848 at 4020.851 kb on + strand, within Psest_3848 at 4020.851 kb on + strand, within Psest_3848 at 4020.851 kb on + strand, within Psest_3848 at 4020.851 kb on + strand, within Psest_3848 at 4020.851 kb on + strand, within Psest_3848 at 4020.851 kb on + strand, within Psest_3848 at 4020.851 kb on + strand, within Psest_3848 at 4020.851 kb on + strand, within Psest_3848 at 4020.851 kb on + strand, within Psest_3848 at 4020.852 kb on - strand, within Psest_3848 at 4020.852 kb on - strand, within Psest_3848 at 4020.852 kb on - strand, within Psest_3848 at 4020.852 kb on - strand, within Psest_3848 at 4020.852 kb on - strand, within Psest_3848 at 4020.852 kb on - strand, within Psest_3848 at 4020.942 kb on + strand at 4020.950 kb on + strand at 4020.950 kb on + strand at 4020.950 kb on + strand at 4020.950 kb on + strand at 4020.950 kb on + strand at 4020.950 kb on + strand at 4020.950 kb on + strand at 4020.951 kb on - strand at 4020.951 kb on - strand at 4021.005 kb on + strand at 4021.097 kb on + strand, within Psest_3849 at 4021.097 kb on + strand, within Psest_3849 at 4021.218 kb on + strand, within Psest_3849 at 4021.218 kb on + strand, within Psest_3849 at 4021.219 kb on - strand, within Psest_3849 at 4021.219 kb on - strand, within Psest_3849 at 4021.219 kb on - strand, within Psest_3849 at 4021.398 kb on + strand, within Psest_3849 at 4021.399 kb on - strand, within Psest_3849 at 4021.461 kb on + strand, within Psest_3849 at 4021.462 kb on - strand, within Psest_3849 at 4021.462 kb on - strand, within Psest_3849 at 4021.515 kb on + strand, within Psest_3849 at 4021.516 kb on - strand, within Psest_3849 at 4021.516 kb on - strand, within Psest_3849 at 4021.797 kb on + strand, within Psest_3849 at 4021.797 kb on + strand, within Psest_3849 at 4021.797 kb on + strand, within Psest_3849 at 4021.797 kb on + strand, within Psest_3849 at 4021.797 kb on + strand, within Psest_3849 at 4021.797 kb on + strand, within Psest_3849 at 4021.797 kb on + strand, within Psest_3849 at 4021.798 kb on - strand, within Psest_3849 at 4021.798 kb on - strand, within Psest_3849 at 4021.798 kb on - strand, within Psest_3849 at 4021.798 kb on - strand, within Psest_3849 at 4021.824 kb on + strand at 4021.824 kb on + strand at 4021.824 kb on + strand at 4021.824 kb on + strand at 4021.824 kb on + strand at 4021.825 kb on - strand at 4021.825 kb on - strand at 4021.825 kb on - strand at 4021.825 kb on - strand at 4021.825 kb on - strand at 4021.825 kb on - strand at 4021.825 kb on - strand at 4021.825 kb on - strand at 4021.825 kb on - strand at 4021.825 kb on - strand at 4021.830 kb on + strand at 4021.831 kb on - strand at 4021.831 kb on - strand at 4021.831 kb on - strand at 4021.831 kb on - strand at 4021.913 kb on + strand at 4021.914 kb on - strand at 4021.920 kb on + strand at 4021.920 kb on + strand at 4021.920 kb on + strand at 4021.922 kb on + strand at 4021.922 kb on + strand at 4021.922 kb on + strand at 4021.922 kb on + strand at 4021.922 kb on + strand at 4021.922 kb on + strand at 4021.922 kb on + strand at 4021.922 kb on + strand at 4021.922 kb on + strand at 4021.923 kb on - strand at 4021.923 kb on - strand at 4021.923 kb on - strand at 4021.923 kb on - strand at 4021.923 kb on - strand at 4021.923 kb on - strand at 4021.923 kb on - strand at 4021.923 kb on - strand at 4021.923 kb on - strand at 4021.942 kb on + strand at 4021.942 kb on + strand at 4021.942 kb on + strand at 4021.943 kb on - strand at 4021.943 kb on - strand at 4021.943 kb on - strand at 4022.101 kb on + strand at 4022.101 kb on + strand at 4022.102 kb on - strand at 4022.102 kb on - strand at 4022.102 kb on - strand at 4022.102 kb on - strand at 4022.263 kb on - strand, within Psest_3850 at 4022.889 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.9 mM remove 4,020,010 - +0.3 4,020,029 - +1.4 4,020,044 + +0.4 4,020,105 - +0.8 4,020,114 + +0.5 4,020,114 + -0.4 4,020,115 - +1.4 4,020,115 - +0.3 4,020,115 - +0.4 4,020,115 - +0.2 4,020,115 - +0.9 4,020,115 - +0.9 4,020,317 + Psest_3848 0.17 -1.1 4,020,318 - Psest_3848 0.17 -0.9 4,020,318 - Psest_3848 0.17 +1.3 4,020,318 - Psest_3848 0.17 +2.8 4,020,318 - Psest_3848 0.17 +0.5 4,020,374 + Psest_3848 0.24 -0.1 4,020,374 + Psest_3848 0.24 +0.8 4,020,375 - Psest_3848 0.24 +0.6 4,020,375 - Psest_3848 0.24 +1.9 4,020,375 - Psest_3848 0.24 -0.8 4,020,377 + Psest_3848 0.24 -1.7 4,020,377 + Psest_3848 0.24 -0.3 4,020,377 + Psest_3848 0.24 +0.5 4,020,377 + Psest_3848 0.24 +0.0 4,020,377 + Psest_3848 0.24 +0.4 4,020,377 + Psest_3848 0.24 -0.8 4,020,377 + Psest_3848 0.24 +1.1 4,020,378 - Psest_3848 0.25 +0.8 4,020,378 - Psest_3848 0.25 +1.2 4,020,378 - Psest_3848 0.25 +1.1 4,020,378 - Psest_3848 0.25 +0.1 4,020,378 - Psest_3848 0.25 -0.5 4,020,378 - Psest_3848 0.25 +2.1 4,020,378 - Psest_3848 0.25 +0.0 4,020,378 - Psest_3848 0.25 +0.0 4,020,378 - Psest_3848 0.25 +0.4 4,020,419 + Psest_3848 0.30 -2.3 4,020,420 - Psest_3848 0.30 -1.9 4,020,467 + Psest_3848 0.36 -0.8 4,020,467 + Psest_3848 0.36 -0.8 4,020,467 + Psest_3848 0.36 -0.7 4,020,467 + Psest_3848 0.36 -0.3 4,020,467 + Psest_3848 0.36 -0.2 4,020,467 + Psest_3848 0.36 -1.8 4,020,467 + Psest_3848 0.36 -2.8 4,020,467 + Psest_3848 0.36 +2.7 4,020,467 + Psest_3848 0.36 -0.6 4,020,467 + Psest_3848 0.36 -0.2 4,020,467 + Psest_3848 0.36 -0.9 4,020,467 + Psest_3848 0.36 +1.0 4,020,467 + Psest_3848 0.36 -2.0 4,020,467 + Psest_3848 0.36 -0.8 4,020,468 - Psest_3848 0.36 +0.0 4,020,468 - Psest_3848 0.36 +1.7 4,020,468 - Psest_3848 0.36 -1.4 4,020,468 - Psest_3848 0.36 -0.8 4,020,468 - Psest_3848 0.36 -2.1 4,020,468 - Psest_3848 0.36 +0.3 4,020,468 - Psest_3848 0.36 +0.5 4,020,468 - Psest_3848 0.36 +0.8 4,020,468 - Psest_3848 0.36 +0.1 4,020,468 - Psest_3848 0.36 +0.8 4,020,468 - Psest_3848 0.36 +0.2 4,020,468 - Psest_3848 0.36 -1.0 4,020,468 - Psest_3848 0.36 -1.6 4,020,468 - Psest_3848 0.36 +0.3 4,020,468 - Psest_3848 0.36 -0.3 4,020,468 - Psest_3848 0.36 -0.4 4,020,468 - Psest_3848 0.36 -0.1 4,020,527 + Psest_3848 0.44 +0.7 4,020,527 + Psest_3848 0.44 -2.0 4,020,527 + Psest_3848 0.44 +0.2 4,020,527 + Psest_3848 0.44 -0.1 4,020,527 + Psest_3848 0.44 -1.6 4,020,527 + Psest_3848 0.44 -0.8 4,020,527 + Psest_3848 0.44 -1.7 4,020,527 + Psest_3848 0.44 -0.8 4,020,527 + Psest_3848 0.44 +0.4 4,020,527 + Psest_3848 0.44 +1.0 4,020,527 + Psest_3848 0.44 +1.7 4,020,527 + Psest_3848 0.44 +1.0 4,020,527 + Psest_3848 0.44 +0.2 4,020,527 + Psest_3848 0.44 +1.2 4,020,527 + Psest_3848 0.44 -2.4 4,020,528 - Psest_3848 0.44 -0.8 4,020,528 - Psest_3848 0.44 +0.0 4,020,528 - Psest_3848 0.44 +0.4 4,020,528 - Psest_3848 0.44 -1.0 4,020,528 - Psest_3848 0.44 -1.2 4,020,528 - Psest_3848 0.44 -0.3 4,020,528 - Psest_3848 0.44 +0.4 4,020,528 - Psest_3848 0.44 +0.1 4,020,528 - Psest_3848 0.44 +1.5 4,020,528 - Psest_3848 0.44 +1.4 4,020,528 - Psest_3848 0.44 -2.3 4,020,528 - Psest_3848 0.44 -1.1 4,020,528 - Psest_3848 0.44 -0.8 4,020,528 - Psest_3848 0.44 +2.5 4,020,656 + Psest_3848 0.61 +1.3 4,020,656 + Psest_3848 0.61 +1.1 4,020,662 + Psest_3848 0.62 -0.2 4,020,662 + Psest_3848 0.62 +0.8 4,020,662 + Psest_3848 0.62 -1.4 4,020,662 + Psest_3848 0.62 -1.8 4,020,662 + Psest_3848 0.62 +1.5 4,020,662 + Psest_3848 0.62 -0.1 4,020,662 + Psest_3848 0.62 -0.1 4,020,662 + Psest_3848 0.62 -0.2 4,020,663 - Psest_3848 0.62 -0.9 4,020,677 + Psest_3848 0.64 +0.5 4,020,677 + Psest_3848 0.64 -0.6 4,020,677 + Psest_3848 0.64 -0.4 4,020,684 + Psest_3848 0.65 +1.6 4,020,848 + Psest_3848 0.86 +0.6 4,020,848 + Psest_3848 0.86 +0.3 4,020,849 - Psest_3848 0.86 -0.8 4,020,849 - Psest_3848 0.86 -0.8 4,020,851 + Psest_3848 0.87 +0.0 4,020,851 + Psest_3848 0.87 +1.8 4,020,851 + Psest_3848 0.87 -1.7 4,020,851 + Psest_3848 0.87 +0.5 4,020,851 + Psest_3848 0.87 -1.8 4,020,851 + Psest_3848 0.87 +0.2 4,020,851 + Psest_3848 0.87 -0.6 4,020,851 + Psest_3848 0.87 +0.0 4,020,851 + Psest_3848 0.87 -1.5 4,020,852 - Psest_3848 0.87 +2.1 4,020,852 - Psest_3848 0.87 +1.0 4,020,852 - Psest_3848 0.87 +1.0 4,020,852 - Psest_3848 0.87 +0.7 4,020,852 - Psest_3848 0.87 +0.3 4,020,852 - Psest_3848 0.87 -0.4 4,020,942 + +1.0 4,020,950 + +1.0 4,020,950 + -1.1 4,020,950 + -0.3 4,020,950 + -0.5 4,020,950 + -0.2 4,020,950 + -0.6 4,020,950 + -0.0 4,020,951 - +0.0 4,020,951 - -1.4 4,021,005 + -0.2 4,021,097 + Psest_3849 0.10 -0.0 4,021,097 + Psest_3849 0.10 -0.0 4,021,218 + Psest_3849 0.24 +0.9 4,021,218 + Psest_3849 0.24 -0.0 4,021,219 - Psest_3849 0.24 +0.3 4,021,219 - Psest_3849 0.24 -0.5 4,021,219 - Psest_3849 0.24 -1.4 4,021,398 + Psest_3849 0.44 -0.4 4,021,399 - Psest_3849 0.44 -0.2 4,021,461 + Psest_3849 0.51 -0.2 4,021,462 - Psest_3849 0.51 -0.9 4,021,462 - Psest_3849 0.51 -1.8 4,021,515 + Psest_3849 0.57 -1.5 4,021,516 - Psest_3849 0.57 -1.0 4,021,516 - Psest_3849 0.57 -1.0 4,021,797 + Psest_3849 0.88 -0.6 4,021,797 + Psest_3849 0.88 -0.8 4,021,797 + Psest_3849 0.88 -3.0 4,021,797 + Psest_3849 0.88 -0.2 4,021,797 + Psest_3849 0.88 +2.1 4,021,797 + Psest_3849 0.88 -0.2 4,021,797 + Psest_3849 0.88 -0.7 4,021,798 - Psest_3849 0.89 -1.0 4,021,798 - Psest_3849 0.89 +0.3 4,021,798 - Psest_3849 0.89 -2.3 4,021,798 - Psest_3849 0.89 +0.0 4,021,824 + +0.3 4,021,824 + -0.3 4,021,824 + -1.1 4,021,824 + -2.4 4,021,824 + +0.4 4,021,825 - +0.0 4,021,825 - +1.3 4,021,825 - +1.1 4,021,825 - -0.6 4,021,825 - +0.2 4,021,825 - +1.6 4,021,825 - -0.1 4,021,825 - -1.7 4,021,825 - -1.6 4,021,825 - -1.7 4,021,830 + +0.1 4,021,831 - -0.7 4,021,831 - +1.1 4,021,831 - +0.9 4,021,831 - -1.5 4,021,913 + -1.2 4,021,914 - -0.2 4,021,920 + +3.3 4,021,920 + -0.5 4,021,920 + +2.5 4,021,922 + +0.3 4,021,922 + +1.4 4,021,922 + -1.4 4,021,922 + -1.1 4,021,922 + -1.4 4,021,922 + +1.1 4,021,922 + +1.0 4,021,922 + +0.0 4,021,922 + -1.2 4,021,923 - -0.5 4,021,923 - -1.5 4,021,923 - -0.9 4,021,923 - +0.3 4,021,923 - -0.7 4,021,923 - +0.4 4,021,923 - +0.4 4,021,923 - +0.6 4,021,923 - -0.0 4,021,942 + -1.6 4,021,942 + -0.5 4,021,942 + +2.9 4,021,943 - +0.3 4,021,943 - +1.1 4,021,943 - -0.4 4,022,101 + +0.8 4,022,101 + +0.1 4,022,102 - +0.8 4,022,102 - +1.9 4,022,102 - +0.4 4,022,102 - +1.4 4,022,263 - Psest_3850 0.24 +2.1 4,022,889 - -1.5
Or see this region's nucleotide sequence