Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1789

Experiment: Nickel (II) chloride 0.9 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 0.9 mM
1,883,235	+		Psest_1788	0.44	-1.8
1,883,235	+		Psest_1788	0.44	+0.8
1,883,235	+		Psest_1788	0.44	+0.2
1,883,235	+		Psest_1788	0.44	-0.6
1,883,235	+		Psest_1788	0.44	-2.2
1,883,235	+		Psest_1788	0.44	+1.1
1,883,235	+		Psest_1788	0.44	+1.4
1,883,235	+		Psest_1788	0.44	-0.8
1,883,235	+		Psest_1788	0.44	+1.8
1,883,235	+		Psest_1788	0.44	+0.9
1,883,235	+		Psest_1788	0.44	-0.4
1,883,236	-		Psest_1788	0.44	+0.8
1,883,236	-		Psest_1788	0.44	-1.6
1,883,236	-		Psest_1788	0.44	-0.6
1,883,236	-		Psest_1788	0.44	+0.2
1,883,236	-		Psest_1788	0.44	+2.9
1,883,236	-		Psest_1788	0.44	+0.7
1,883,236	-		Psest_1788	0.44	-1.5
1,883,236	-		Psest_1788	0.44	-0.4
1,883,236	-		Psest_1788	0.44	+1.2
1,883,236	-		Psest_1788	0.44	+0.2
1,883,236	-		Psest_1788	0.44	+0.2
1,883,236	-		Psest_1788	0.44	-0.6
1,883,236	-		Psest_1788	0.44	+0.2
1,883,236	-		Psest_1788	0.44	+0.8
1,883,236	-		Psest_1788	0.44	-0.4
1,883,236	-		Psest_1788	0.44	-0.9
1,883,236	-		Psest_1788	0.44	+0.4
1,883,236	-		Psest_1788	0.44	-0.2
1,883,236	-		Psest_1788	0.44	-0.7
1,883,236	-		Psest_1788	0.44	-0.2
1,883,334	+		Psest_1788	0.50	-0.8
1,883,335	-		Psest_1788	0.50	-1.0
1,883,335	-		Psest_1788	0.50	+1.2
1,883,335	-		Psest_1788	0.50	+0.7
1,883,355	+		Psest_1788	0.51	+1.4
1,883,356	-		Psest_1788	0.51	-0.2
1,883,377	+		Psest_1788	0.52	+2.0
1,883,619	+		Psest_1788	0.66	+1.8
1,883,619	+		Psest_1788	0.66	-0.0
1,883,622	+		Psest_1788	0.66	+0.3
1,883,622	+		Psest_1788	0.66	+0.5
1,883,622	+		Psest_1788	0.66	+0.5
1,883,623	-		Psest_1788	0.66	-0.4
1,883,623	-		Psest_1788	0.66	+0.8
1,883,623	-		Psest_1788	0.66	-0.0
1,883,623	-		Psest_1788	0.66	-1.3
1,883,623	-		Psest_1788	0.66	+0.9
1,883,623	-		Psest_1788	0.66	+0.5
1,883,623	-		Psest_1788	0.66	+0.1
1,883,623	-		Psest_1788	0.66	-1.2
1,883,623	-		Psest_1788	0.66	+1.2
1,883,623	-		Psest_1788	0.66	+0.4
1,883,623	-		Psest_1788	0.66	+1.0
1,883,623	-		Psest_1788	0.66	+0.3
1,883,726	+		Psest_1788	0.72	+0.1
1,883,727	-		Psest_1788	0.72	-0.7
1,883,750	+		Psest_1788	0.74	-1.0
1,883,833	-		Psest_1788	0.78	-1.6
1,883,833	-		Psest_1788	0.78	-1.2
1,883,833	-		Psest_1788	0.78	-0.4
1,883,833	-		Psest_1788	0.78	+1.1
1,884,028	-		Psest_1788	0.89	+0.6
1,884,108	+				+0.4
1,884,108	+				+1.4
1,884,108	+				+0.4
1,884,108	+				+1.6
1,884,108	+				+1.2
1,884,108	+				+0.6
1,884,108	+				-1.4
1,884,109	-				+2.2
1,884,109	-				+1.6
1,884,200	+				+0.6
1,884,200	+				+0.3
1,884,480	+		Psest_1789	0.29	-0.1
1,884,481	-		Psest_1789	0.29	+0.2
1,884,481	-		Psest_1789	0.29	-0.9
1,884,642	+		Psest_1789	0.47	+0.7
1,884,642	+		Psest_1789	0.47	-0.5
1,884,642	+		Psest_1789	0.47	+0.6
1,884,642	+		Psest_1789	0.47	-0.2
1,884,642	+		Psest_1789	0.47	+1.0
1,884,642	+		Psest_1789	0.47	-0.3
1,884,642	+		Psest_1789	0.47	-0.4
1,884,642	+		Psest_1789	0.47	-1.9
1,884,642	+		Psest_1789	0.47	-1.4
1,884,642	+		Psest_1789	0.47	-1.2
1,884,642	+		Psest_1789	0.47	-1.4
1,884,642	+		Psest_1789	0.47	-0.7
1,884,642	+		Psest_1789	0.47	+0.0
1,884,642	+		Psest_1789	0.47	+0.2
1,884,642	+		Psest_1789	0.47	-0.0
1,884,642	+		Psest_1789	0.47	-0.5
1,884,643	-		Psest_1789	0.47	+0.4
1,884,643	-		Psest_1789	0.47	+0.6
1,884,643	-		Psest_1789	0.47	+0.4
1,884,643	-		Psest_1789	0.47	+0.9
1,884,643	-		Psest_1789	0.47	+1.4
1,884,643	-		Psest_1789	0.47	+0.5
1,884,643	-		Psest_1789	0.47	+0.3
1,884,674	-		Psest_1789	0.51	+0.7
1,884,692	+		Psest_1789	0.53	-0.6
1,884,692	+		Psest_1789	0.53	-0.2
1,884,692	+		Psest_1789	0.53	+0.0
1,884,692	+		Psest_1789	0.53	-0.7
1,884,692	+		Psest_1789	0.53	+0.4
1,884,692	+		Psest_1789	0.53	+1.1
1,884,692	+		Psest_1789	0.53	-0.4
1,884,693	-		Psest_1789	0.53	+0.6
1,884,693	-		Psest_1789	0.53	-0.6
1,884,693	-		Psest_1789	0.53	+0.5
1,884,839	+		Psest_1789	0.70	+2.4
1,884,840	-		Psest_1789	0.70	-0.1
1,884,840	-		Psest_1789	0.70	-0.0
1,884,933	+		Psest_1789	0.81	+0.4
1,884,933	+		Psest_1789	0.81	-0.7
1,884,933	+		Psest_1789	0.81	-1.1
1,884,933	+		Psest_1789	0.81	-0.9
1,884,933	+		Psest_1789	0.81	+0.2
1,884,933	+		Psest_1789	0.81	+0.0
1,884,933	+		Psest_1789	0.81	+0.6
1,884,933	+		Psest_1789	0.81	+2.4
1,884,933	+		Psest_1789	0.81	+0.1
1,884,987	+		Psest_1789	0.87	+1.7
1,884,988	-		Psest_1789	0.87	+0.5
1,885,007	+		Psest_1789	0.90	+1.2
1,885,040	+				+0.8
1,885,041	-				-0.9
1,885,041	-				+0.4
1,885,041	-				+1.5
1,885,041	-				+0.5
1,885,041	-				-0.1
1,885,041	-				-0.0
1,885,041	-				-1.0
1,885,041	-				-0.9
1,885,041	-				-1.4
1,885,041	-				+0.9
1,885,041	-				-0.2
1,885,041	-				-0.2
1,885,044	+				+0.4
1,885,044	+				+0.7
1,885,044	+				-1.2
1,885,044	+				+1.1
1,885,044	+				-1.1
1,885,044	+				+0.3
1,885,044	+				-0.9
1,885,044	+				-0.3
1,885,044	+				+0.1
1,885,044	+				-0.0
1,885,044	+				-0.0
1,885,044	+				-0.5
1,885,044	+				-0.9
1,885,044	+				-0.5
1,885,044	+				+0.7
1,885,044	+				+1.6
1,885,044	+				-1.0
1,885,044	+				-2.0
1,885,045	-				-2.0
1,885,045	-				-0.8
1,885,045	-				+0.8
1,885,045	-				-0.3
1,885,045	-				-1.8
1,885,045	-				+0.6
1,885,045	-				-0.2
1,885,045	-				-0.9
1,885,045	-				-0.1
1,885,045	-				+1.9
1,885,045	-				-1.1
1,885,045	-				+1.6
1,885,050	+				+1.0
1,885,050	+				-0.4
1,885,050	+				-1.7
1,885,050	+				+0.3
1,885,051	-				+0.5
1,885,051	-				-2.4
1,885,051	-				+0.3
1,885,051	-				-3.0
1,885,051	-				+1.1
1,885,051	-				+1.1
1,885,051	-				+0.4
1,885,051	-				+0.1
1,885,051	-				-0.9
1,885,051	-				-1.9
1,885,101	+				-0.8
1,885,171	+				+0.9
1,885,190	+				-1.1
1,885,191	-				+0.0
1,885,776	+		Psest_1790	0.69	-0.0
1,885,776	+		Psest_1790	0.69	-0.3
1,885,776	+		Psest_1790	0.69	-0.9
1,885,777	-		Psest_1790	0.69	-0.0
1,885,777	-		Psest_1790	0.69	-2.0
1,885,819	+		Psest_1790	0.75	+1.1
1,885,820	-		Psest_1790	0.75	+0.0
1,885,824	-		Psest_1790	0.76	-1.6
1,885,824	-		Psest_1790	0.76	+1.0
1,885,828	+		Psest_1790	0.76	-1.2
1,885,828	+		Psest_1790	0.76	-2.2
1,885,828	+		Psest_1790	0.76	+0.7
1,885,828	+		Psest_1790	0.76	+1.7
1,885,828	-		Psest_1790	0.76	-2.2
1,885,829	-		Psest_1790	0.76	+1.1
1,885,879	-		Psest_1790	0.83	-2.4
1,885,946	+				-0.7
1,885,946	+				-2.4
1,885,947	-				+1.5
1,885,947	-				+0.3
1,886,064	+				-0.3
1,886,064	+				-0.4