Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS25135

Experiment: p-Coumaric (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) 5 mM
5,619,038	+		PFLU_RS25130	0.81	+0.9
5,619,039	-		PFLU_RS25130	0.81	+0.9
5,619,039	-		PFLU_RS25130	0.81	-0.3
5,619,039	-		PFLU_RS25130	0.81	+0.5
5,619,039	-		PFLU_RS25130	0.81	-2.1
5,619,039	-		PFLU_RS25130	0.81	-3.4
5,619,193	+		PFLU_RS25130	0.88	-2.4
5,619,296	+				-1.9
5,619,344	+				-1.5
5,619,344	+				-1.7
5,619,344	+				-0.5
5,619,344	+				+0.5
5,619,344	+				+1.5
5,619,344	+				-0.2
5,619,344	+				-0.4
5,619,344	+				+1.5
5,619,345	-				+0.6
5,619,345	-				+0.9
5,619,345	-				+0.7
5,619,345	-				-2.2
5,619,345	-				-0.7
5,619,345	-				-0.1
5,619,345	-				-0.5
5,619,358	+				-0.7
5,619,358	+				-1.5
5,619,358	+				+1.5
5,619,358	+				-0.6
5,619,359	-				-0.1
5,619,427	+				-0.7
5,619,428	-				-1.2
5,619,455	+				+0.2
5,619,455	+				+0.7
5,619,455	+				-0.5
5,619,455	+				-1.7
5,619,455	+				-0.8
5,619,455	+				+0.5
5,619,455	+				-0.1
5,619,455	+				-1.9
5,619,455	+				+1.2
5,619,455	+				-2.3
5,619,455	+				-1.3
5,619,456	-				+5.1
5,619,456	-				-0.5
5,619,456	-				+0.3
5,619,456	-				+1.3
5,619,456	-				-2.8
5,619,456	-				-1.5
5,619,456	-				+0.5
5,619,456	-				-1.2
5,619,456	-				+0.5
5,619,456	-				-1.2
5,619,456	-				-0.1
5,619,457	+				-0.4
5,619,457	+				+0.3
5,619,457	+				+0.1
5,619,457	+				-0.1
5,619,457	+				+2.2
5,619,458	-				-0.6
5,619,458	-				-0.5
5,619,458	-				+1.2
5,619,458	-				+2.2
5,619,458	-				+3.3
5,619,458	-				-1.2
5,619,477	+				+0.9
5,619,477	+				+1.5
5,619,477	+				+0.5
5,619,477	+				+4.5
5,619,477	+				+0.5
5,619,477	+				-1.8
5,619,478	-				+1.1
5,619,478	-				-1.4
5,619,478	-				-0.1
5,619,478	-				+0.8
5,619,478	-				+1.4
5,619,478	-				+1.4
5,619,478	-				-0.2
5,619,478	-				+2.2
5,619,488	+				-0.5
5,619,489	-				-1.9
5,619,489	-				+1.6
5,619,489	-				-0.6
5,619,517	-				-0.1
5,619,517	-				-0.8
5,619,517	-				-1.7
5,619,517	-				-1.1
5,619,517	-				+2.8
5,619,517	-				+1.9
5,619,517	-				+1.2
5,619,517	-				-2.6
5,619,517	-				-0.1
5,619,517	-				+1.4
5,619,517	-				+1.5
5,619,517	-				-1.1
5,619,517	-				-1.6
5,619,517	-				+2.6
5,619,517	-				+4.3
5,619,521	-				+0.5
5,619,521	-				-2.1
5,619,521	-				+0.2
5,619,521	-				-0.6
5,619,521	-				-0.1
5,619,521	-				-0.6
5,619,521	-				-1.3
5,619,525	-				+1.9
5,619,525	-				+0.2
5,619,525	-				+1.7
5,619,525	-				-1.6
5,619,525	-				-0.9
5,619,525	-				-0.3
5,619,525	-				-0.4
5,619,525	-				-1.2
5,619,525	-				-0.8
5,619,525	-				+2.5
5,619,525	-				+0.6
5,619,618	-				+0.5
5,619,618	-				-0.1
5,619,618	-				-0.1
5,619,618	-				+0.5
5,619,618	-				-0.9
5,619,618	-				-1.1
5,619,618	-				+0.4
5,619,618	-				-0.3
5,619,618	-				-0.3
5,619,622	-				+0.1
5,619,622	-				+1.9
5,619,622	-				-1.9
5,619,622	-				-0.7
5,619,622	-				+0.5
5,619,622	-				-0.6
5,619,622	-				-1.7
5,619,622	-				+1.9
5,619,748	+		PFLU_RS31795	0.32	-0.6
5,619,779	-		PFLU_RS31795	0.46	-0.7
5,619,779	-		PFLU_RS31795	0.46	+0.4
5,619,781	+		PFLU_RS31795	0.47	+2.5
5,619,781	+		PFLU_RS31795	0.47	+0.7
5,619,782	-		PFLU_RS31795	0.47	-1.2
5,619,782	-		PFLU_RS31795	0.47	-2.4
5,619,782	-		PFLU_RS31795	0.47	-0.7
5,619,782	-		PFLU_RS31795	0.47	+0.5
5,619,782	-		PFLU_RS31795	0.47	-0.8
5,619,782	-		PFLU_RS31795	0.47	+0.9
5,619,791	+		PFLU_RS31795	0.51	-0.3
5,619,791	+		PFLU_RS31795	0.51	+0.9
5,619,838	-		PFLU_RS31795	0.72	+1.1
5,619,923	+				+1.5
5,619,923	+				+0.2
5,619,923	+				-0.8
5,619,923	+				-1.2
5,619,923	+				-0.3
5,619,923	+				+0.2
5,619,923	+				+1.5
5,619,923	+				-2.1
5,619,923	+				+0.5
5,619,924	-				-1.9
5,619,924	-				+0.8
5,619,924	-				+0.9
5,619,924	-				+0.9
5,619,924	-				-1.8
5,619,924	-				-1.1
5,619,924	-				+0.0
5,619,924	-				+1.0
5,619,942	+				-0.4
5,619,943	-				+0.5
5,619,944	+				+0.9
5,619,945	-				-0.9
5,619,965	+				+1.8
5,619,965	+				-1.8
5,619,965	+				-0.9
5,619,966	-				+0.9
5,619,966	-				+0.5
5,619,966	-				-0.4
5,619,966	-				-0.5
5,619,966	-				-2.2
5,619,966	-				-0.3
5,619,966	-				-1.1
5,619,967	+				-0.3
5,619,967	+				-0.9
5,619,967	+				-1.4
5,619,967	+				-1.1
5,619,967	+				-0.8
5,619,967	+				+0.3
5,619,967	+				-1.3
5,619,967	+				-0.2
5,619,967	+				+0.3
5,619,968	-				-1.3
5,619,968	-				-1.2
5,619,968	-				+0.1
5,619,968	-				+0.3
5,619,968	-				-1.6
5,619,968	-				-0.4
5,619,968	-				+1.4
5,619,968	-				-1.9
5,620,001	+				+0.9
5,620,001	+				-0.1
5,620,001	+				-1.6
5,620,001	+				-0.9
5,620,001	+				+0.9
5,620,001	+				-1.3
5,620,001	+				+0.2
5,620,002	-				-1.4
5,620,002	-				+0.1
5,620,002	-				+0.2
5,620,002	-				+0.2
5,620,002	-				-0.4
5,620,002	-				+1.5
5,620,002	-				-0.7
5,620,002	-				-0.1
5,620,002	-				+0.5
5,620,016	+				+0.4
5,620,016	+				+1.5
5,620,016	+				+0.8
5,620,016	+				+2.0
5,620,016	+				-1.3
5,620,016	+				+0.5
5,620,016	+				-2.5
5,620,016	+				+0.9
5,620,017	-				-0.1
5,620,017	-				-0.1
5,620,017	-				+1.9
5,620,017	-				-1.9
5,620,036	+				-0.5
5,620,036	+				+2.7
5,620,037	-				+1.3
5,620,037	-				-1.3
5,620,063	+		PFLU_RS25135	0.15	+0.5
5,620,063	+		PFLU_RS25135	0.15	-0.8
5,620,064	-		PFLU_RS25135	0.16	-2.5
5,620,145	+		PFLU_RS25135	0.55	+0.7
5,620,145	+		PFLU_RS25135	0.55	-0.5
5,620,145	+		PFLU_RS25135	0.55	-0.8
5,620,146	-		PFLU_RS25135	0.56	+0.9
5,620,206	+		PFLU_RS25135	0.85	-0.6
5,620,235	+				-0.4
5,620,236	-				-0.3
5,620,236	-				-0.6
5,620,236	-				+0.8
5,620,284	-				+0.9
5,620,310	-				+0.4
5,620,322	+				+1.2
5,620,342	+				+0.9
5,620,343	-				-0.6
5,620,363	+				+0.6
5,620,364	-				+1.8
5,620,364	-				+0.7
5,620,423	+				-1.3
5,620,424	-				-0.7
5,620,424	-				+1.8
5,620,424	-				-2.0
5,620,424	-				+0.2
5,620,494	+				+1.4
5,620,494	+				-1.5
5,620,494	+				+0.8
5,620,494	+				-0.3
5,620,494	+				+0.8
5,620,494	+				+2.2
5,620,495	-				+1.0
5,620,495	-				+1.4
5,620,495	-				-0.6
5,620,495	-				-0.1
5,620,495	-				+1.2
5,620,495	-				+0.8
5,620,541	-		PFLU_RS25140	0.10	+1.1
5,620,587	+		PFLU_RS25140	0.13	-2.1
5,620,587	+		PFLU_RS25140	0.13	+0.9
5,620,587	+		PFLU_RS25140	0.13	+0.9
5,620,587	+		PFLU_RS25140	0.13	-0.8
5,620,587	+		PFLU_RS25140	0.13	-1.0
5,620,587	+		PFLU_RS25140	0.13	-0.1
5,620,587	+		PFLU_RS25140	0.13	+1.5
5,620,587	+		PFLU_RS25140	0.13	-1.4
5,620,587	+		PFLU_RS25140	0.13	-0.1
5,620,587	+		PFLU_RS25140	0.13	-0.3
5,620,587	+		PFLU_RS25140	0.13	-1.2
5,620,587	+		PFLU_RS25140	0.13	-0.5
5,620,588	-		PFLU_RS25140	0.13	+0.2
5,620,588	-		PFLU_RS25140	0.13	-1.0
5,620,588	-		PFLU_RS25140	0.13	+0.5
5,620,588	-		PFLU_RS25140	0.13	+1.5
5,620,588	-		PFLU_RS25140	0.13	-1.7
5,620,588	-		PFLU_RS25140	0.13	-1.0
5,620,588	-		PFLU_RS25140	0.13	-0.9
5,620,588	-		PFLU_RS25140	0.13	+1.7
5,620,588	-		PFLU_RS25140	0.13	-0.3
5,620,588	-		PFLU_RS25140	0.13	-1.6
5,620,598	+		PFLU_RS25140	0.13	-0.8
5,620,598	+		PFLU_RS25140	0.13	-2.2
5,620,598	+		PFLU_RS25140	0.13	+0.8
5,620,599	-		PFLU_RS25140	0.13	-1.6
5,620,599	-		PFLU_RS25140	0.13	-1.9
5,620,599	-		PFLU_RS25140	0.13	+1.0
5,620,599	-		PFLU_RS25140	0.13	-1.5
5,620,599	-		PFLU_RS25140	0.13	+2.1
5,620,599	-		PFLU_RS25140	0.13	+1.3
5,620,599	-		PFLU_RS25140	0.13	+0.2
5,620,599	-		PFLU_RS25140	0.13	-1.4
5,620,599	-		PFLU_RS25140	0.13	-0.9
5,620,652	+		PFLU_RS25140	0.16	-2.1
5,620,653	-		PFLU_RS25140	0.16	+0.4
5,620,863	+		PFLU_RS25140	0.27	-2.0
5,620,864	-		PFLU_RS25140	0.27	-0.5
5,620,872	+		PFLU_RS25140	0.28	-1.6
5,620,872	+		PFLU_RS25140	0.28	-1.3
5,620,872	+		PFLU_RS25140	0.28	-0.1
5,620,872	+		PFLU_RS25140	0.28	+0.4
5,620,872	+		PFLU_RS25140	0.28	+0.8
5,620,872	+		PFLU_RS25140	0.28	-0.8
5,620,872	+		PFLU_RS25140	0.28	+0.9
5,620,872	+		PFLU_RS25140	0.28	-0.3
5,620,872	+		PFLU_RS25140	0.28	-0.1
5,620,872	+		PFLU_RS25140	0.28	+1.4
5,620,873	-		PFLU_RS25140	0.28	-0.1
5,620,873	-		PFLU_RS25140	0.28	+1.6
5,620,873	-		PFLU_RS25140	0.28	-1.1
5,620,873	-		PFLU_RS25140	0.28	+0.5
5,620,873	-		PFLU_RS25140	0.28	+2.9
5,620,910	+		PFLU_RS25140	0.30	+1.7
5,620,911	-		PFLU_RS25140	0.30	+0.7
5,620,949	+		PFLU_RS25140	0.32	-0.8
5,620,949	+		PFLU_RS25140	0.32	-2.9
5,620,949	+		PFLU_RS25140	0.32	-2.1
5,620,950	-		PFLU_RS25140	0.32	-0.9
5,620,950	-		PFLU_RS25140	0.32	+2.2
5,620,950	-		PFLU_RS25140	0.32	+0.7
5,620,950	-		PFLU_RS25140	0.32	-0.6
5,620,967	+		PFLU_RS25140	0.33	+1.1
5,620,967	+		PFLU_RS25140	0.33	+0.2
5,620,967	+		PFLU_RS25140	0.33	-0.1
5,620,968	-		PFLU_RS25140	0.33	-1.2
5,620,968	-		PFLU_RS25140	0.33	-1.3
5,620,968	-		PFLU_RS25140	0.33	-0.6
5,620,968	-		PFLU_RS25140	0.33	+0.9
5,620,970	+		PFLU_RS25140	0.33	-1.0
5,620,970	+		PFLU_RS25140	0.33	+0.2
5,620,970	+		PFLU_RS25140	0.33	+0.3
5,620,970	+		PFLU_RS25140	0.33	-1.4
5,620,971	-		PFLU_RS25140	0.33	-0.8
5,620,971	-		PFLU_RS25140	0.33	+1.5
5,621,111	+		PFLU_RS25140	0.40	+2.5
5,621,111	+		PFLU_RS25140	0.40	-2.2
5,621,111	+		PFLU_RS25140	0.40	+0.7
5,621,111	+		PFLU_RS25140	0.40	-0.8
5,621,111	+		PFLU_RS25140	0.40	+0.9
5,621,111	+		PFLU_RS25140	0.40	-0.5
5,621,111	+		PFLU_RS25140	0.40	-0.5
5,621,111	+		PFLU_RS25140	0.40	-1.5
5,621,111	+		PFLU_RS25140	0.40	+1.2
5,621,111	+		PFLU_RS25140	0.40	-0.5
5,621,112	-		PFLU_RS25140	0.40	-1.4
5,621,112	-		PFLU_RS25140	0.40	-1.9
5,621,112	-		PFLU_RS25140	0.40	-1.6
5,621,112	-		PFLU_RS25140	0.40	-0.1
5,621,112	-		PFLU_RS25140	0.40	-0.9
5,621,112	-		PFLU_RS25140	0.40	-1.1
5,621,112	-		PFLU_RS25140	0.40	-2.1
5,621,112	-		PFLU_RS25140	0.40	+0.2
5,621,112	-		PFLU_RS25140	0.40	+1.5
5,621,112	-		PFLU_RS25140	0.40	-0.6
5,621,112	-		PFLU_RS25140	0.40	-0.6
5,621,112	-		PFLU_RS25140	0.40	+0.4
5,621,112	-		PFLU_RS25140	0.40	-1.1
5,621,112	-		PFLU_RS25140	0.40	+0.9
5,621,192	+		PFLU_RS25140	0.45	-1.5
5,621,192	+		PFLU_RS25140	0.45	-0.1
5,621,193	-		PFLU_RS25140	0.45	-0.2
5,621,219	-		PFLU_RS25140	0.46	-1.1
5,621,219	-		PFLU_RS25140	0.46	+2.4
5,621,219	-		PFLU_RS25140	0.46	-0.9