Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05305

Experiment: p-Coumaric (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) 5 mM
1,180,411	+				-2.8
1,180,525	+				-1.4
1,180,526	-				+1.1
1,180,526	-				-1.0
1,180,526	-				-1.2
1,180,552	-				+1.8
1,180,612	+				-0.6
1,180,612	+				+0.6
1,180,612	+				-1.0
1,180,612	+				+0.8
1,180,615	+				+0.7
1,180,615	+				-1.7
1,180,616	-				+0.8
1,180,616	-				+0.4
1,180,616	-				-1.0
1,180,637	+				+0.9
1,180,637	+				+1.1
1,180,675	+				+1.2
1,180,675	+				-1.4
1,180,675	+				-0.1
1,180,675	+				-0.2
1,180,676	-				-0.9
1,180,676	-				-1.1
1,180,693	+		PFLU_RS05300	0.11	+0.5
1,180,858	+		PFLU_RS05300	0.37	+0.4
1,180,859	-		PFLU_RS05300	0.38	-1.6
1,180,873	-		PFLU_RS05300	0.40	+0.4
1,180,978	+		PFLU_RS05300	0.56	+1.4
1,180,978	+		PFLU_RS05300	0.56	-0.6
1,180,978	+		PFLU_RS05300	0.56	-0.4
1,180,978	+		PFLU_RS05300	0.56	+0.3
1,180,978	+		PFLU_RS05300	0.56	+0.3
1,180,979	-		PFLU_RS05300	0.56	+0.0
1,180,979	-		PFLU_RS05300	0.56	+0.9
1,180,981	+		PFLU_RS05300	0.57	-1.2
1,180,981	+		PFLU_RS05300	0.57	-0.7
1,180,981	+		PFLU_RS05300	0.57	+1.1
1,180,981	+		PFLU_RS05300	0.57	-0.9
1,180,981	+		PFLU_RS05300	0.57	-1.2
1,180,981	+		PFLU_RS05300	0.57	-1.9
1,180,982	-		PFLU_RS05300	0.57	-1.4
1,180,982	-		PFLU_RS05300	0.57	+2.0
1,180,982	-		PFLU_RS05300	0.57	+1.1
1,180,982	-		PFLU_RS05300	0.57	+1.0
1,180,982	-		PFLU_RS05300	0.57	+1.0
1,180,982	-		PFLU_RS05300	0.57	-0.3
1,180,982	-		PFLU_RS05300	0.57	+0.4
1,180,993	+		PFLU_RS05300	0.59	+1.1
1,180,994	-		PFLU_RS05300	0.59	-2.0
1,180,994	-		PFLU_RS05300	0.59	-0.2
1,181,033	+		PFLU_RS05300	0.65	+2.0
1,181,034	-		PFLU_RS05300	0.65	-0.4
1,181,034	-		PFLU_RS05300	0.65	+0.8
1,181,209	+				+0.4
1,181,209	+				+2.0
1,181,209	+				+0.1
1,181,209	+				-2.3
1,181,210	-				+0.7
1,181,210	-				+0.1
1,181,213	+				+1.5
1,181,213	+				-2.3
1,181,213	+				+0.5
1,181,213	+				-0.8
1,181,213	+				-0.7
1,181,213	+				-1.8
1,181,214	-				-0.2
1,181,214	-				-1.5
1,181,214	-				-1.6
1,181,214	-				-0.9
1,181,255	+				-0.0
1,181,256	-				+0.3
1,181,256	-				-0.4
1,181,256	-				-1.8
1,181,256	-				-0.7
1,181,420	+		PFLU_RS05305	0.42	-0.8
1,181,420	+		PFLU_RS05305	0.42	-2.1
1,181,420	+		PFLU_RS05305	0.42	+1.7
1,181,421	-		PFLU_RS05305	0.42	-3.1
1,181,532	+		PFLU_RS05305	0.71	-0.7
1,181,532	+		PFLU_RS05305	0.71	-1.8
1,181,532	+		PFLU_RS05305	0.71	-0.6
1,181,533	-		PFLU_RS05305	0.71	-2.2
1,181,533	-		PFLU_RS05305	0.71	+0.7
1,181,681	+				-2.0
1,181,681	+				+0.4
1,181,681	+				-1.3
1,181,682	-				-1.5
1,181,682	-				-1.4
1,181,682	-				+0.5
1,181,682	-				-0.4
1,181,682	-				+1.5
1,181,704	-				-1.7
1,181,704	-				-1.2
1,181,704	-				-2.4
1,181,704	-				+1.6
1,181,704	-				-1.8
1,181,704	-				+0.1
1,181,704	-				-2.2
1,181,786	-				-0.0
1,181,830	+				-0.7
1,181,845	+				+0.3
1,181,845	+				-2.3
1,181,845	+				+1.1
1,181,845	+				-0.0
1,181,845	+				+0.8
1,181,846	-				-2.2
1,181,856	+				+0.1
1,181,856	+				+0.4
1,181,856	+				+0.4
1,181,856	+				-1.9
1,181,856	+				+1.6
1,181,857	-				-2.6
1,181,857	-				-1.6
1,181,857	-				-2.2
1,181,922	+				+0.6
1,181,923	-				-1.6
1,182,032	+				+0.2
1,182,032	+				-0.2
1,182,032	+				-1.0
1,182,032	+				+0.0
1,182,032	+				+3.3
1,182,032	+				-1.3
1,182,032	+				+0.5
1,182,032	+				-1.4
1,182,032	+				+1.4
1,182,032	+				-1.0
1,182,032	+				-0.6
1,182,032	+				+0.4
1,182,032	+				+0.4
1,182,033	-				-2.3
1,182,033	-				-0.7
1,182,033	-				+0.4
1,182,033	-				+1.6
1,182,033	-				-1.2
1,182,033	-				-1.0
1,182,033	-				+0.4
1,182,033	-				+1.4
1,182,033	-				+1.3
1,182,033	-				-1.3
1,182,033	-				-2.5
1,182,033	-				+1.3
1,182,033	-				-1.6
1,182,107	+		PFLU_RS05310	0.10	+0.3
1,182,108	-		PFLU_RS05310	0.10	-2.0
1,182,240	+		PFLU_RS05310	0.16	-1.4
1,182,240	+		PFLU_RS05310	0.16	-1.0
1,182,240	+		PFLU_RS05310	0.16	-2.0
1,182,240	+		PFLU_RS05310	0.16	-2.1
1,182,240	+		PFLU_RS05310	0.16	+1.0
1,182,240	+		PFLU_RS05310	0.16	-0.7
1,182,240	+		PFLU_RS05310	0.16	-1.2
1,182,240	+		PFLU_RS05310	0.16	-2.5
1,182,240	+		PFLU_RS05310	0.16	+0.4
1,182,240	+		PFLU_RS05310	0.16	+1.0
1,182,240	+		PFLU_RS05310	0.16	-0.7
1,182,241	-		PFLU_RS05310	0.16	+0.4
1,182,241	-		PFLU_RS05310	0.16	-0.9
1,182,241	-		PFLU_RS05310	0.16	-2.0
1,182,241	-		PFLU_RS05310	0.16	-1.7
1,182,241	-		PFLU_RS05310	0.16	-0.8
1,182,241	-		PFLU_RS05310	0.16	+0.1
1,182,241	-		PFLU_RS05310	0.16	+0.1
1,182,241	-		PFLU_RS05310	0.16	+0.4
1,182,241	-		PFLU_RS05310	0.16	-0.7
1,182,241	-		PFLU_RS05310	0.16	+0.8
1,182,241	-		PFLU_RS05310	0.16	-0.7
1,182,241	-		PFLU_RS05310	0.16	-1.3
1,182,241	-		PFLU_RS05310	0.16	-2.2
1,182,241	-		PFLU_RS05310	0.16	+0.2
1,182,241	-		PFLU_RS05310	0.16	-0.7
1,182,246	+		PFLU_RS05310	0.16	-1.7
1,182,247	-		PFLU_RS05310	0.16	-0.7
1,182,247	-		PFLU_RS05310	0.16	-0.7
1,182,316	+		PFLU_RS05310	0.19	+0.4
1,182,316	+		PFLU_RS05310	0.19	+1.0
1,182,317	-		PFLU_RS05310	0.19	-1.9
1,182,317	-		PFLU_RS05310	0.19	-0.8
1,182,359	-		PFLU_RS05310	0.21	-0.6
1,182,359	-		PFLU_RS05310	0.21	-0.8
1,182,359	-		PFLU_RS05310	0.21	-0.9
1,182,562	-		PFLU_RS05310	0.29	-2.8