Experiment: p-Coumaric (C) 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS04085 and PFLU_RS04090 overlap by 1 nucleotides PFLU_RS04090 and PFLU_RS04095 are separated by 10 nucleotides PFLU_RS04095 and PFLU_RS04100 are separated by 10 nucleotides
PFLU_RS04085: PFLU_RS04085 - ABC transporter ATP-binding protein, at 925,072 to 926,043
_RS04085
PFLU_RS04090: PFLU_RS04090 - ABC transporter ATP-binding protein, at 926,043 to 927,011
_RS04090
PFLU_RS04095: PFLU_RS04095 - ABC transporter permease subunit, at 927,022 to 927,933
_RS04095
PFLU_RS04100: PFLU_RS04100 - ABC transporter permease subunit, at 927,944 to 928,954
_RS04100
Position (kb) 927
928 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 926.045 kb on - strand at 926.068 kb on + strand at 926.068 kb on + strand at 926.069 kb on - strand at 926.069 kb on - strand at 926.069 kb on - strand at 926.069 kb on - strand at 926.140 kb on + strand, within PFLU_RS04090 at 926.140 kb on + strand, within PFLU_RS04090 at 926.140 kb on + strand, within PFLU_RS04090 at 926.140 kb on + strand, within PFLU_RS04090 at 926.141 kb on - strand, within PFLU_RS04090 at 926.141 kb on - strand, within PFLU_RS04090 at 926.141 kb on - strand, within PFLU_RS04090 at 926.141 kb on - strand, within PFLU_RS04090 at 926.183 kb on - strand, within PFLU_RS04090 at 926.269 kb on + strand, within PFLU_RS04090 at 926.270 kb on - strand, within PFLU_RS04090 at 926.332 kb on + strand, within PFLU_RS04090 at 926.332 kb on + strand, within PFLU_RS04090 at 926.332 kb on + strand, within PFLU_RS04090 at 926.333 kb on - strand, within PFLU_RS04090 at 926.333 kb on - strand, within PFLU_RS04090 at 926.543 kb on + strand, within PFLU_RS04090 at 926.567 kb on - strand, within PFLU_RS04090 at 926.698 kb on + strand, within PFLU_RS04090 at 926.698 kb on + strand, within PFLU_RS04090 at 926.698 kb on + strand, within PFLU_RS04090 at 926.699 kb on - strand, within PFLU_RS04090 at 926.699 kb on - strand, within PFLU_RS04090 at 926.699 kb on - strand, within PFLU_RS04090 at 926.699 kb on - strand, within PFLU_RS04090 at 926.734 kb on - strand, within PFLU_RS04090 at 926.930 kb on + strand at 926.930 kb on + strand at 926.930 kb on + strand at 926.931 kb on - strand at 926.931 kb on - strand at 927.000 kb on + strand at 927.000 kb on + strand at 927.001 kb on - strand at 927.001 kb on - strand at 927.149 kb on + strand, within PFLU_RS04095 at 927.149 kb on + strand, within PFLU_RS04095 at 927.149 kb on + strand, within PFLU_RS04095 at 927.149 kb on + strand, within PFLU_RS04095 at 927.149 kb on + strand, within PFLU_RS04095 at 927.149 kb on + strand, within PFLU_RS04095 at 927.149 kb on + strand, within PFLU_RS04095 at 927.149 kb on + strand, within PFLU_RS04095 at 927.150 kb on - strand, within PFLU_RS04095 at 927.150 kb on - strand, within PFLU_RS04095 at 927.150 kb on - strand, within PFLU_RS04095 at 927.150 kb on - strand, within PFLU_RS04095 at 927.150 kb on - strand, within PFLU_RS04095 at 927.150 kb on - strand, within PFLU_RS04095 at 927.199 kb on + strand, within PFLU_RS04095 at 927.199 kb on + strand, within PFLU_RS04095 at 927.199 kb on + strand, within PFLU_RS04095 at 927.199 kb on + strand, within PFLU_RS04095 at 927.200 kb on - strand, within PFLU_RS04095 at 927.200 kb on - strand, within PFLU_RS04095 at 927.200 kb on - strand, within PFLU_RS04095 at 927.200 kb on - strand, within PFLU_RS04095 at 927.291 kb on + strand, within PFLU_RS04095 at 927.292 kb on - strand, within PFLU_RS04095 at 927.292 kb on - strand, within PFLU_RS04095 at 927.356 kb on + strand, within PFLU_RS04095 at 927.356 kb on + strand, within PFLU_RS04095 at 927.356 kb on + strand, within PFLU_RS04095 at 927.356 kb on + strand, within PFLU_RS04095 at 927.356 kb on + strand, within PFLU_RS04095 at 927.356 kb on + strand, within PFLU_RS04095 at 927.356 kb on + strand, within PFLU_RS04095 at 927.357 kb on - strand, within PFLU_RS04095 at 927.357 kb on - strand, within PFLU_RS04095 at 927.357 kb on - strand, within PFLU_RS04095 at 927.357 kb on - strand, within PFLU_RS04095 at 927.357 kb on - strand, within PFLU_RS04095 at 927.357 kb on - strand, within PFLU_RS04095 at 927.357 kb on - strand, within PFLU_RS04095 at 927.357 kb on - strand, within PFLU_RS04095 at 927.357 kb on - strand, within PFLU_RS04095 at 927.357 kb on - strand, within PFLU_RS04095 at 927.404 kb on + strand, within PFLU_RS04095 at 927.404 kb on + strand, within PFLU_RS04095 at 927.404 kb on + strand, within PFLU_RS04095 at 927.404 kb on + strand, within PFLU_RS04095 at 927.404 kb on + strand, within PFLU_RS04095 at 927.404 kb on + strand, within PFLU_RS04095 at 927.404 kb on + strand, within PFLU_RS04095 at 927.404 kb on + strand, within PFLU_RS04095 at 927.404 kb on + strand, within PFLU_RS04095 at 927.404 kb on + strand, within PFLU_RS04095 at 927.404 kb on + strand, within PFLU_RS04095 at 927.404 kb on + strand, within PFLU_RS04095 at 927.405 kb on - strand, within PFLU_RS04095 at 927.405 kb on - strand, within PFLU_RS04095 at 927.405 kb on - strand, within PFLU_RS04095 at 927.405 kb on - strand, within PFLU_RS04095 at 927.405 kb on - strand, within PFLU_RS04095 at 927.405 kb on - strand, within PFLU_RS04095 at 927.648 kb on + strand, within PFLU_RS04095 at 927.648 kb on + strand, within PFLU_RS04095 at 927.649 kb on - strand, within PFLU_RS04095 at 927.649 kb on - strand, within PFLU_RS04095 at 927.649 kb on - strand, within PFLU_RS04095 at 927.759 kb on + strand, within PFLU_RS04095 at 927.888 kb on - strand at 927.888 kb on - strand at 927.921 kb on + strand at 927.921 kb on + strand at 927.921 kb on + strand at 927.921 kb on + strand at 927.921 kb on + strand at 927.921 kb on + strand at 927.921 kb on + strand at 927.921 kb on + strand at 927.921 kb on + strand at 927.921 kb on + strand at 927.921 kb on + strand at 927.921 kb on + strand at 927.921 kb on + strand at 927.921 kb on + strand at 927.921 kb on + strand at 927.922 kb on - strand at 927.922 kb on - strand at 927.922 kb on - strand at 927.922 kb on - strand at 927.922 kb on - strand at 927.922 kb on - strand at 927.922 kb on - strand at 927.922 kb on - strand at 927.922 kb on - strand at 927.922 kb on - strand at 927.922 kb on - strand at 927.922 kb on - strand at 927.922 kb on - strand at 927.922 kb on - strand at 927.981 kb on + strand at 927.982 kb on - strand at 928.127 kb on + strand, within PFLU_RS04100 at 928.211 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.257 kb on + strand, within PFLU_RS04100 at 928.258 kb on - strand, within PFLU_RS04100 at 928.258 kb on - strand, within PFLU_RS04100 at 928.258 kb on - strand, within PFLU_RS04100 at 928.258 kb on - strand, within PFLU_RS04100 at 928.258 kb on - strand, within PFLU_RS04100 at 928.258 kb on - strand, within PFLU_RS04100 at 928.258 kb on - strand, within PFLU_RS04100 at 928.437 kb on + strand, within PFLU_RS04100 at 928.481 kb on + strand, within PFLU_RS04100 at 928.482 kb on - strand, within PFLU_RS04100 at 928.749 kb on + strand, within PFLU_RS04100 at 928.749 kb on + strand, within PFLU_RS04100 at 928.749 kb on + strand, within PFLU_RS04100 at 928.750 kb on - strand, within PFLU_RS04100 at 928.750 kb on - strand, within PFLU_RS04100 at 928.750 kb on - strand, within PFLU_RS04100 at 928.750 kb on - strand, within PFLU_RS04100 at 928.750 kb on - strand, within PFLU_RS04100 at 928.759 kb on - strand, within PFLU_RS04100 at 928.759 kb on - strand, within PFLU_RS04100 at 928.759 kb on - strand, within PFLU_RS04100 at 928.759 kb on - strand, within PFLU_RS04100 at 928.767 kb on + strand, within PFLU_RS04100 at 928.767 kb on + strand, within PFLU_RS04100 at 928.767 kb on + strand, within PFLU_RS04100 at 928.767 kb on + strand, within PFLU_RS04100 at 928.767 kb on + strand, within PFLU_RS04100 at 928.767 kb on + strand, within PFLU_RS04100 at 928.768 kb on - strand, within PFLU_RS04100 at 928.768 kb on - strand, within PFLU_RS04100 at 928.768 kb on - strand, within PFLU_RS04100 at 928.768 kb on - strand, within PFLU_RS04100 at 928.768 kb on - strand, within PFLU_RS04100 at 928.768 kb on - strand, within PFLU_RS04100 at 928.768 kb on - strand, within PFLU_RS04100 at 928.898 kb on + strand at 928.898 kb on + strand at 928.899 kb on - strand at 928.899 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) 5 mM remove 926,045 - +0.1 926,068 + -0.2 926,068 + -0.7 926,069 - +1.1 926,069 - -2.4 926,069 - +1.3 926,069 - +2.5 926,140 + PFLU_RS04090 0.10 -0.3 926,140 + PFLU_RS04090 0.10 +2.3 926,140 + PFLU_RS04090 0.10 +0.4 926,140 + PFLU_RS04090 0.10 -1.5 926,141 - PFLU_RS04090 0.10 +2.5 926,141 - PFLU_RS04090 0.10 -1.7 926,141 - PFLU_RS04090 0.10 +2.5 926,141 - PFLU_RS04090 0.10 -2.0 926,183 - PFLU_RS04090 0.14 +0.4 926,269 + PFLU_RS04090 0.23 +2.4 926,270 - PFLU_RS04090 0.23 +0.2 926,332 + PFLU_RS04090 0.30 +2.8 926,332 + PFLU_RS04090 0.30 -1.5 926,332 + PFLU_RS04090 0.30 +1.1 926,333 - PFLU_RS04090 0.30 +0.8 926,333 - PFLU_RS04090 0.30 -0.3 926,543 + PFLU_RS04090 0.52 +2.3 926,567 - PFLU_RS04090 0.54 +1.3 926,698 + PFLU_RS04090 0.68 +1.7 926,698 + PFLU_RS04090 0.68 -0.7 926,698 + PFLU_RS04090 0.68 +0.3 926,699 - PFLU_RS04090 0.68 +0.3 926,699 - PFLU_RS04090 0.68 -1.0 926,699 - PFLU_RS04090 0.68 +0.5 926,699 - PFLU_RS04090 0.68 +1.5 926,734 - PFLU_RS04090 0.71 +1.6 926,930 + -0.7 926,930 + -0.3 926,930 + -1.9 926,931 - -0.7 926,931 - +1.9 927,000 + +0.9 927,000 + +1.9 927,001 - +1.1 927,001 - -0.5 927,149 + PFLU_RS04095 0.14 +0.5 927,149 + PFLU_RS04095 0.14 +0.3 927,149 + PFLU_RS04095 0.14 +1.2 927,149 + PFLU_RS04095 0.14 +1.8 927,149 + PFLU_RS04095 0.14 +2.4 927,149 + PFLU_RS04095 0.14 +1.0 927,149 + PFLU_RS04095 0.14 +2.2 927,149 + PFLU_RS04095 0.14 +1.4 927,150 - PFLU_RS04095 0.14 +2.5 927,150 - PFLU_RS04095 0.14 +0.6 927,150 - PFLU_RS04095 0.14 -1.3 927,150 - PFLU_RS04095 0.14 +1.2 927,150 - PFLU_RS04095 0.14 +0.9 927,150 - PFLU_RS04095 0.14 +1.9 927,199 + PFLU_RS04095 0.19 +1.2 927,199 + PFLU_RS04095 0.19 -0.7 927,199 + PFLU_RS04095 0.19 -0.9 927,199 + PFLU_RS04095 0.19 -0.3 927,200 - PFLU_RS04095 0.20 -0.5 927,200 - PFLU_RS04095 0.20 +2.2 927,200 - PFLU_RS04095 0.20 +3.0 927,200 - PFLU_RS04095 0.20 -0.9 927,291 + PFLU_RS04095 0.29 +2.5 927,292 - PFLU_RS04095 0.30 +0.7 927,292 - PFLU_RS04095 0.30 -2.4 927,356 + PFLU_RS04095 0.37 +2.3 927,356 + PFLU_RS04095 0.37 +0.1 927,356 + PFLU_RS04095 0.37 +1.2 927,356 + PFLU_RS04095 0.37 +1.6 927,356 + PFLU_RS04095 0.37 +0.9 927,356 + PFLU_RS04095 0.37 -1.1 927,356 + PFLU_RS04095 0.37 -2.3 927,357 - PFLU_RS04095 0.37 +3.2 927,357 - PFLU_RS04095 0.37 -0.1 927,357 - PFLU_RS04095 0.37 -0.2 927,357 - PFLU_RS04095 0.37 +0.8 927,357 - PFLU_RS04095 0.37 +0.9 927,357 - PFLU_RS04095 0.37 -0.1 927,357 - PFLU_RS04095 0.37 -2.1 927,357 - PFLU_RS04095 0.37 -0.5 927,357 - PFLU_RS04095 0.37 +2.1 927,357 - PFLU_RS04095 0.37 -0.8 927,404 + PFLU_RS04095 0.42 -1.7 927,404 + PFLU_RS04095 0.42 +0.1 927,404 + PFLU_RS04095 0.42 -0.4 927,404 + PFLU_RS04095 0.42 -0.5 927,404 + PFLU_RS04095 0.42 +1.6 927,404 + PFLU_RS04095 0.42 -0.4 927,404 + PFLU_RS04095 0.42 +0.3 927,404 + PFLU_RS04095 0.42 -1.7 927,404 + PFLU_RS04095 0.42 +3.1 927,404 + PFLU_RS04095 0.42 +0.8 927,404 + PFLU_RS04095 0.42 +2.4 927,404 + PFLU_RS04095 0.42 +1.1 927,405 - PFLU_RS04095 0.42 -1.7 927,405 - PFLU_RS04095 0.42 +4.3 927,405 - PFLU_RS04095 0.42 +2.2 927,405 - PFLU_RS04095 0.42 +0.8 927,405 - PFLU_RS04095 0.42 +1.5 927,405 - PFLU_RS04095 0.42 +0.9 927,648 + PFLU_RS04095 0.69 +0.2 927,648 + PFLU_RS04095 0.69 -1.7 927,649 - PFLU_RS04095 0.69 +0.2 927,649 - PFLU_RS04095 0.69 +0.0 927,649 - PFLU_RS04095 0.69 +0.5 927,759 + PFLU_RS04095 0.81 -0.5 927,888 - +0.5 927,888 - -0.3 927,921 + +2.0 927,921 + +2.1 927,921 + +2.6 927,921 + +1.8 927,921 + -0.5 927,921 + +0.5 927,921 + -2.2 927,921 + -0.7 927,921 + +2.7 927,921 + -1.3 927,921 + +1.8 927,921 + -1.4 927,921 + +0.3 927,921 + +1.5 927,921 + +1.8 927,922 - -1.6 927,922 - +0.5 927,922 - +0.6 927,922 - +0.1 927,922 - +2.4 927,922 - +0.2 927,922 - +3.8 927,922 - -2.2 927,922 - +0.8 927,922 - +0.6 927,922 - +0.5 927,922 - -0.9 927,922 - +1.8 927,922 - -1.0 927,981 + -0.3 927,982 - +2.5 928,127 + PFLU_RS04100 0.18 +1.5 928,211 + PFLU_RS04100 0.26 +0.9 928,257 + PFLU_RS04100 0.31 +1.6 928,257 + PFLU_RS04100 0.31 +3.0 928,257 + PFLU_RS04100 0.31 +2.0 928,257 + PFLU_RS04100 0.31 -0.6 928,257 + PFLU_RS04100 0.31 +3.3 928,257 + PFLU_RS04100 0.31 +0.5 928,257 + PFLU_RS04100 0.31 +0.6 928,257 + PFLU_RS04100 0.31 +1.1 928,257 + PFLU_RS04100 0.31 +2.9 928,257 + PFLU_RS04100 0.31 -1.7 928,257 + PFLU_RS04100 0.31 +1.5 928,257 + PFLU_RS04100 0.31 +0.2 928,257 + PFLU_RS04100 0.31 +1.0 928,257 + PFLU_RS04100 0.31 +2.9 928,257 + PFLU_RS04100 0.31 +0.2 928,257 + PFLU_RS04100 0.31 +0.8 928,257 + PFLU_RS04100 0.31 +1.4 928,257 + PFLU_RS04100 0.31 -1.7 928,257 + PFLU_RS04100 0.31 +2.4 928,257 + PFLU_RS04100 0.31 +1.3 928,257 + PFLU_RS04100 0.31 -0.2 928,257 + PFLU_RS04100 0.31 -0.7 928,258 - PFLU_RS04100 0.31 -2.3 928,258 - PFLU_RS04100 0.31 +0.1 928,258 - PFLU_RS04100 0.31 -0.1 928,258 - PFLU_RS04100 0.31 +1.1 928,258 - PFLU_RS04100 0.31 +3.0 928,258 - PFLU_RS04100 0.31 +3.5 928,258 - PFLU_RS04100 0.31 -0.8 928,437 + PFLU_RS04100 0.49 +1.3 928,481 + PFLU_RS04100 0.53 +2.2 928,482 - PFLU_RS04100 0.53 +1.0 928,749 + PFLU_RS04100 0.80 -0.3 928,749 + PFLU_RS04100 0.80 +0.2 928,749 + PFLU_RS04100 0.80 +1.9 928,750 - PFLU_RS04100 0.80 -2.2 928,750 - PFLU_RS04100 0.80 +2.2 928,750 - PFLU_RS04100 0.80 -0.3 928,750 - PFLU_RS04100 0.80 -0.1 928,750 - PFLU_RS04100 0.80 +1.8 928,759 - PFLU_RS04100 0.81 +0.9 928,759 - PFLU_RS04100 0.81 -1.2 928,759 - PFLU_RS04100 0.81 -0.4 928,759 - PFLU_RS04100 0.81 +0.3 928,767 + PFLU_RS04100 0.81 +2.1 928,767 + PFLU_RS04100 0.81 +1.1 928,767 + PFLU_RS04100 0.81 +0.2 928,767 + PFLU_RS04100 0.81 +0.9 928,767 + PFLU_RS04100 0.81 +0.5 928,767 + PFLU_RS04100 0.81 +1.3 928,768 - PFLU_RS04100 0.82 -0.5 928,768 - PFLU_RS04100 0.82 -0.4 928,768 - PFLU_RS04100 0.82 +1.7 928,768 - PFLU_RS04100 0.82 +0.2 928,768 - PFLU_RS04100 0.82 +2.2 928,768 - PFLU_RS04100 0.82 -0.7 928,768 - PFLU_RS04100 0.82 +0.5 928,898 + +0.6 928,898 + +0.8 928,899 - +0.1 928,899 - +2.2
Or see this region's nucleotide sequence