Experiment: Nickel (II) chloride 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1525 and Psest_1526 are separated by 9 nucleotides Psest_1526 and Psest_1527 are separated by 106 nucleotides
Psest_1525: Psest_1525 - Uncharacterized protein conserved in bacteria, at 1,624,302 to 1,625,774
_1525
Psest_1526: Psest_1526 - Predicted membrane protein, at 1,625,784 to 1,627,031
_1526
Psest_1527: Psest_1527 - Na+/proline symporter, at 1,627,138 to 1,630,605
_1527
Position (kb)
1625
1626
1627
1628 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1624.859 kb on + strand, within Psest_1525 at 1625.152 kb on + strand, within Psest_1525 at 1625.153 kb on - strand, within Psest_1525 at 1625.231 kb on + strand, within Psest_1525 at 1625.307 kb on + strand, within Psest_1525 at 1625.308 kb on - strand, within Psest_1525 at 1625.308 kb on - strand, within Psest_1525 at 1625.419 kb on - strand, within Psest_1525 at 1625.419 kb on - strand, within Psest_1525 at 1625.419 kb on - strand, within Psest_1525 at 1625.772 kb on + strand at 1626.028 kb on + strand, within Psest_1526 at 1626.028 kb on + strand, within Psest_1526 at 1626.028 kb on + strand, within Psest_1526 at 1626.028 kb on + strand, within Psest_1526 at 1626.029 kb on - strand, within Psest_1526 at 1626.181 kb on + strand, within Psest_1526 at 1626.181 kb on + strand, within Psest_1526 at 1626.181 kb on + strand, within Psest_1526 at 1626.181 kb on + strand, within Psest_1526 at 1626.182 kb on - strand, within Psest_1526 at 1626.184 kb on + strand, within Psest_1526 at 1626.184 kb on + strand, within Psest_1526 at 1626.184 kb on + strand, within Psest_1526 at 1626.185 kb on - strand, within Psest_1526 at 1626.185 kb on - strand, within Psest_1526 at 1626.205 kb on + strand, within Psest_1526 at 1626.405 kb on + strand, within Psest_1526 at 1626.453 kb on + strand, within Psest_1526 at 1626.454 kb on - strand, within Psest_1526 at 1626.454 kb on - strand, within Psest_1526 at 1626.458 kb on - strand, within Psest_1526 at 1626.508 kb on + strand, within Psest_1526 at 1626.807 kb on + strand, within Psest_1526 at 1626.808 kb on - strand, within Psest_1526 at 1626.808 kb on - strand, within Psest_1526 at 1626.808 kb on - strand, within Psest_1526 at 1626.808 kb on - strand, within Psest_1526 at 1627.072 kb on - strand at 1627.139 kb on + strand at 1627.346 kb on + strand at 1627.375 kb on - strand at 1627.540 kb on + strand, within Psest_1527 at 1627.642 kb on + strand, within Psest_1527 at 1627.642 kb on + strand, within Psest_1527 at 1627.643 kb on - strand, within Psest_1527 at 1627.643 kb on - strand, within Psest_1527 at 1627.643 kb on - strand, within Psest_1527 at 1627.643 kb on - strand, within Psest_1527 at 1627.643 kb on - strand, within Psest_1527 at 1627.643 kb on - strand, within Psest_1527 at 1627.643 kb on - strand, within Psest_1527 at 1627.643 kb on - strand, within Psest_1527 at 1627.924 kb on + strand, within Psest_1527 at 1627.957 kb on + strand, within Psest_1527
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.8 mM remove 1,624,859 + Psest_1525 0.38 -0.2 1,625,152 + Psest_1525 0.58 -1.0 1,625,153 - Psest_1525 0.58 -1.0 1,625,231 + Psest_1525 0.63 +0.0 1,625,307 + Psest_1525 0.68 -0.3 1,625,308 - Psest_1525 0.68 +0.0 1,625,308 - Psest_1525 0.68 -0.4 1,625,419 - Psest_1525 0.76 -1.8 1,625,419 - Psest_1525 0.76 -2.1 1,625,419 - Psest_1525 0.76 +0.3 1,625,772 + +0.7 1,626,028 + Psest_1526 0.20 -1.0 1,626,028 + Psest_1526 0.20 -0.9 1,626,028 + Psest_1526 0.20 +2.8 1,626,028 + Psest_1526 0.20 -2.4 1,626,029 - Psest_1526 0.20 -0.7 1,626,181 + Psest_1526 0.32 +0.1 1,626,181 + Psest_1526 0.32 -1.1 1,626,181 + Psest_1526 0.32 +1.9 1,626,181 + Psest_1526 0.32 -0.2 1,626,182 - Psest_1526 0.32 +0.9 1,626,184 + Psest_1526 0.32 +0.5 1,626,184 + Psest_1526 0.32 -1.8 1,626,184 + Psest_1526 0.32 +1.0 1,626,185 - Psest_1526 0.32 -1.5 1,626,185 - Psest_1526 0.32 -1.4 1,626,205 + Psest_1526 0.34 +0.1 1,626,405 + Psest_1526 0.50 -1.1 1,626,453 + Psest_1526 0.54 -0.1 1,626,454 - Psest_1526 0.54 -1.3 1,626,454 - Psest_1526 0.54 -1.4 1,626,458 - Psest_1526 0.54 -0.8 1,626,508 + Psest_1526 0.58 -0.0 1,626,807 + Psest_1526 0.82 +0.7 1,626,808 - Psest_1526 0.82 -2.0 1,626,808 - Psest_1526 0.82 -1.2 1,626,808 - Psest_1526 0.82 +0.9 1,626,808 - Psest_1526 0.82 -1.8 1,627,072 - +1.1 1,627,139 + -1.0 1,627,346 + -0.2 1,627,375 - +0.9 1,627,540 + Psest_1527 0.12 +2.5 1,627,642 + Psest_1527 0.15 +1.4 1,627,642 + Psest_1527 0.15 +0.5 1,627,643 - Psest_1527 0.15 -1.0 1,627,643 - Psest_1527 0.15 -0.6 1,627,643 - Psest_1527 0.15 +0.5 1,627,643 - Psest_1527 0.15 +1.2 1,627,643 - Psest_1527 0.15 +1.1 1,627,643 - Psest_1527 0.15 -0.2 1,627,643 - Psest_1527 0.15 -1.6 1,627,643 - Psest_1527 0.15 +0.1 1,627,924 + Psest_1527 0.23 -1.2 1,627,957 + Psest_1527 0.24 +0.5
Or see this region's nucleotide sequence